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Spg030105 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030105
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncalmodulin-binding transcription activator 3 isoform X2
Genome locationscaffold6:11847812..11848944
RNA-Seq ExpressionSpg030105
SyntenySpg030105
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577305.1 Calmodulin-binding transcription activator 3, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

XP_022984173.1 calmodulin-binding transcription activator 3 isoform X1 [Cucurbita maxima]3.1e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

XP_023553565.1 calmodulin-binding transcription activator 2 isoform X1 [Cucurbita pepo subsp. pepo]3.1e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

XP_023553566.1 calmodulin-binding transcription activator 3 isoform X2 [Cucurbita pepo subsp. pepo]3.1e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

XP_023553568.1 calmodulin-binding transcription activator 3 isoform X4 [Cucurbita pepo subsp. pepo]3.1e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

TrEMBL top hitse value%identityAlignment
A0A6J1J4I4 calmodulin-binding transcription activator 3 isoform X41.5e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

A0A6J1J7Y6 calmodulin-binding transcription activator 3 isoform X31.5e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

A0A6J1J9P8 calmodulin-binding transcription activator 3 isoform X21.5e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

A0A6J1J9S9 calmodulin-binding transcription activator 3 isoform X11.5e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

A0A6J1J9T3 calmodulin-binding transcription activator 3 isoform X51.5e-1249.48Show/hide
Query:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN
        +L VKRRN   HDEHAAAIRIQ  F  WKGR+DFLI    + + Q  +      K Y                WR KGSGL GFK EA +EDSSKQN
Subjt:  MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAEDSSKQN

SwissProt top hitse value%identityAlignment
Q6NPP4 Calmodulin-binding transcription activator 25.5e-0431.91Show/hide
Query:  HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFK---------PEAPAEDSSKQNFI
        HAAA++IQK + GWK R++FL+    + + Q  +      K Y                WR KGSGL GFK         P  PA      +F+
Subjt:  HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFK---------PEAPAEDSSKQNFI

Q8GSA7 Calmodulin-binding transcription activator 34.2e-0436.36Show/hide
Query:  RNPRLHDE---HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAE
        ++ R H +    AAAIRIQ  F G+KGR+D+LI    + + Q  +      K Y                WR KG+GL GFK EA  E
Subjt:  RNPRLHDE---HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAE

Arabidopsis top hitse value%identityAlignment
AT2G22300.1 signal responsive 13.0e-0536.36Show/hide
Query:  RNPRLHDE---HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAE
        ++ R H +    AAAIRIQ  F G+KGR+D+LI    + + Q  +      K Y                WR KG+GL GFK EA  E
Subjt:  RNPRLHDE---HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAE

AT2G22300.2 signal responsive 13.0e-0536.36Show/hide
Query:  RNPRLHDE---HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAE
        ++ R H +    AAAIRIQ  F G+KGR+D+LI    + + Q  +      K Y                WR KG+GL GFK EA  E
Subjt:  RNPRLHDE---HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFKPEAPAE

AT5G64220.1 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains3.9e-0531.91Show/hide
Query:  HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFK---------PEAPAEDSSKQNFI
        HAAA++IQK + GWK R++FL+    + + Q  +      K Y                WR KGSGL GFK         P  PA      +F+
Subjt:  HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFK---------PEAPAEDSSKQNFI

AT5G64220.2 Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains3.9e-0531.91Show/hide
Query:  HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFK---------PEAPAEDSSKQNFI
        HAAA++IQK + GWK R++FL+    + + Q  +      K Y                WR KGSGL GFK         P  PA      +F+
Subjt:  HAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGY---------------CWRIKGSGLGGFK---------PEAPAEDSSKQNFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAACAGTTAAGAGACGCAATCCAAGGCTACATGATGAGCATGCTGCTGCCATTCGCATACAGAAAAACTTCTGTGGTTGGAAGGGCAGACGAGATTTTCTGATCTA
TTTCTCTTCGTTGCCTCGTGGACAGCTCTTGCTTTTTTGTGGGAATTCTGGAAAAGGTTATTGTTGGAGAATAAAAGGAAGTGGTTTAGGAGGATTTAAACCAGAAGCAC
CAGCTGAGGACTCTAGCAAGCAAAATTTCATCAACTCTATCTTATTAGTTGAATTTAAACCTCAATGGAGGTTTGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTAACAGTTAAGAGACGCAATCCAAGGCTACATGATGAGCATGCTGCTGCCATTCGCATACAGAAAAACTTCTGTGGTTGGAAGGGCAGACGAGATTTTCTGATCTA
TTTCTCTTCGTTGCCTCGTGGACAGCTCTTGCTTTTTTGTGGGAATTCTGGAAAAGGTTATTGTTGGAGAATAAAAGGAAGTGGTTTAGGAGGATTTAAACCAGAAGCAC
CAGCTGAGGACTCTAGCAAGCAAAATTTCATCAACTCTATCTTATTAGTTGAATTTAAACCTCAATGGAGGTTTGCCTAA
Protein sequenceShow/hide protein sequence
MLTVKRRNPRLHDEHAAAIRIQKNFCGWKGRRDFLIYFSSLPRGQLLLFCGNSGKGYCWRIKGSGLGGFKPEAPAEDSSKQNFINSILLVEFKPQWRFA