; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030147 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030147
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description50S ribosomal protein L29, chloroplastic-like
Genome locationscaffold6:11208170..11210867
RNA-Seq ExpressionSpg030147
SyntenySpg030147
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577307.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.1e-7394.05Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV +P+K LSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022941582.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata]5.4e-7394.64Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV  PSK LSSTSKSSFNG QIRFPFSFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022977189.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]1.2e-7294.05Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV  PSK LSSTSKSSFNG QIRFPFSFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022985118.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]3.1e-7394.64Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV +P+K LSSTSKSSFNGLQIRFPFSFRVPPKAAC GGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_038903244.1 50S ribosomal protein L29, chloroplastic [Benincasa hispida]4.8e-7495.24Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+V +P KVL+STSKSSFNGLQIRFPFSFRVPPK ACTGGRNSSVVMMAKREEELKEIRAK+TEEI EEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

TrEMBL top hitse value%identityAlignment
A0A6J1C3N4 50S ribosomal protein L29, chloroplastic1.0e-6992.86Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPS+V LPS VLSSTSKSSF GLQIR PFS RV  K  C G RNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1EMX4 50S ribosomal protein L29, chloroplastic-like3.2e-7193.29Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV +P+K LSSTSKSSFNGLQIRFPFS RVPPKAACTGGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE++
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEA

A0A6J1FMW5 50S ribosomal protein L29, chloroplastic-like2.6e-7394.64Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV  PSK LSSTSKSSFNG QIRFPFSFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1IQR3 50S ribosomal protein L29, chloroplastic-like5.8e-7394.05Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV  PSK LSSTSKSSFNG QIRFPFSFRVPPK A TGGRNSSVVMMAKREEELKEIR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1JCM6 50S ribosomal protein L29, chloroplastic-like1.5e-7394.64Show/hide
Query:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV +P+K LSSTSKSSFNGLQIRFPFSFRVPPKAAC GGRNS VVMMAKREEELK+IRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA

SwissProt top hitse value%identityAlignment
P82248 50S ribosomal protein L29, chloroplastic3.4e-3859.17Show/hide
Query:  ASPSSVFLPSKVLSS-TSKSSFNGLQ---IRFPFSFRV----PPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNE
        ++P S  L S   S+  +KSSF+GL+   +    S R+    PP         SSVV+M K+E+ELKE+R KT E++NEE++ LKGEL MLRLQ+SAR  
Subjt:  ASPSSVFLPSKVLSS-TSKSSFNGLQ---IRFPFSFRV----PPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS
        FK S+F RMRKR+ARMLTVKREREIE+GVGKRLSRKLD+ WK+SIVVRPPPSLKKL+E+  A  EAEK+
Subjt:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKS

Q49ZG0 50S ribosomal protein L292.5e-0448.39Show/hide
Query:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG
        KEIR  TT EI E++   K EL  LR Q +     +++  R +RK IAR+ TV REREIE+G
Subjt:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG

Q4L8A6 50S ribosomal protein L295.5e-0449.18Show/hide
Query:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE
        KEIR  TT EI E++   K EL  LR Q +     +++  R +RK IAR+ TV REREIEE
Subjt:  KEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE

Q9FJP3 50S ribosomal protein L29, chloroplastic1.4e-4766.07Show/hide
Query:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P  +++F      ++++ SSF+G++I+   S RVP  A  +      SVVMM+KRE ELKEIR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE

Q9SWI6 50S ribosomal protein L29, chloroplastic7.1e-3675.93Show/hide
Query:  RNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPP
        R +++V MAKRE+EL+EIRA TTE++ EEVVDLKGEL +LRL++SAR EFK+SEF RMRKRIARMLTVKREREIE+G+ KRLSRKLDRKWK+SIVVRPPP
Subjt:  RNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPP

Query:  SLKKLREE
        SL+  +EE
Subjt:  SLKKLREE

Arabidopsis top hitse value%identityAlignment
AT5G65220.1 Ribosomal L29 family protein9.8e-4966.07Show/hide
Query:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN
        M++LSIA+P  +++F      ++++ SSF+G++I+   S RVP  A  +      SVVMM+KRE ELKEIR+KTTE++ EEVVDLKGEL MLRLQKSARN
Subjt:  MINLSIASP--SSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGR-NSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WKKSIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAACCTTTCAATTGCTTCGCCTTCGAGTGTTTTTCTTCCTTCAAAAGTTCTTAGCTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATTCGTTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAGCGGCATGTACAGGAGGCCGCAATTCGTCGGTGGTAATGATGGCGAAGAGGGAAGAGGAATTGAAGGAAATCAGAGCGAAAACTACTGAGG
AAATAAACGAAGAGGTCGTCGATCTCAAGGGCGAGCTTCTTATGCTTCGGCTTCAGAAATCAGCTCGCAATGAGTTTAAGTCCAGTGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACTGTAAAACGTGAAAGGGAGATCGAAGAGGGAGTGGGCAAAAGGCTGTCGAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTCGTCAGACC
ACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAACCTTTCAATTGCTTCGCCTTCGAGTGTTTTTCTTCCTTCAAAAGTTCTTAGCTCGACCTCCAAATCCTCCTTCAATGGCCTTCAAATTCGTTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAGCGGCATGTACAGGAGGCCGCAATTCGTCGGTGGTAATGATGGCGAAGAGGGAAGAGGAATTGAAGGAAATCAGAGCGAAAACTACTGAGG
AAATAAACGAAGAGGTCGTCGATCTCAAGGGCGAGCTTCTTATGCTTCGGCTTCAGAAATCAGCTCGCAATGAGTTTAAGTCCAGTGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACTGTAAAACGTGAAAGGGAGATCGAAGAGGGAGTGGGCAAAAGGCTGTCGAGAAAGTTAGATAGAAAGTGGAAGAAAAGTATTGTCGTCAGACC
ACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCAGCTGAAGAAGCTGAGAAATCTGCTTGA
Protein sequenceShow/hide protein sequence
MINLSIASPSSVFLPSKVLSSTSKSSFNGLQIRFPFSFRVPPKAACTGGRNSSVVMMAKREEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSARNEFKSSEFRRMRKR
IARMLTVKREREIEEGVGKRLSRKLDRKWKKSIVVRPPPSLKKLREEEAAAEEAEKSA