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Spg030154 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030154
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionarabinogalactan peptide 22-like
Genome locationscaffold6:8249183..8250745
RNA-Seq ExpressionSpg030154
SyntenySpg030154
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009424 - Arabinogalactan protein 16/20/22/41


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577157.1 Arabinogalactan protein 20, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2594.37Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAAL+FAIFLPVA+PQSLAPAPAPTSDGT+IDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_022136454.1 arabinogalactan peptide 22-like [Momordica charantia]1.5e-2491.55Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSRASFGFVAAAAL+FAIFLPVA P SL PAPAP+SDGT+IDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_022931316.1 arabinogalactan peptide 22-like [Cucurbita moschata]7.9e-2694.37Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAAL+FAIFLPVA+PQSLAPAPAPTSDGT+IDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_022985432.1 arabinogalactan peptide 20 [Cucurbita maxima]3.0e-2592.96Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAAL+FAIFLPVA+PQSLAPAPAPTSDGT+IDQGIAYVLMLVALALTYLIHNADLS+SF
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

XP_038882280.1 arabinogalactan protein 22-like [Benincasa hispida]4.3e-2488.73Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVS ASFGF+AAAAL+FAIFLPVA+P SLAPAPAPTSDGT+IDQGIAYVLM+VALALTYLIHNADLSN+F
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

TrEMBL top hitse value%identityAlignment
A0A5D3CYF3 Arabinogalactan peptide 22-like9.7e-2284.29Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS
        MAVSR+SF  +AA AL+FAIFLPVA P SLAPAPAPTSDGT+IDQGIAYVLM+VALALTYLIHNADLSN+
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS

A0A6J1C4C2 arabinogalactan peptide 22-like7.2e-2591.55Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSRASFGFVAAAAL+FAIFLPVA P SL PAPAP+SDGT+IDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

A0A6J1ETC6 arabinogalactan peptide 22-like3.8e-2694.37Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAAL+FAIFLPVA+PQSLAPAPAPTSDGT+IDQGIAYVLMLVALALTYLIHNADLSNSF
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

A0A6J1FMT5 arabinogalactan peptide 22-like8.8e-2388.57Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS
        MAVSRASFGFVAAAALVF IFLPVA+PQSLAPAPAPTSDGT+IDQGIAY+LM VALALTYLIH+ADL +S
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS

A0A6J1J4V7 arabinogalactan peptide 201.5e-2592.96Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        MAVSR SFGFVAAAAL+FAIFLPVA+PQSLAPAPAPTSDGT+IDQGIAYVLMLVALALTYLIHNADLS+SF
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

SwissProt top hitse value%identityAlignment
O82337 Arabinogalactan protein 162.5e-1464.71Show/hide
Query:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        SR S    A  + VFA+ L +A  QSLAPAPAPTSDGT+IDQGIAY+LM+VAL LTYLIH  D S+S+
Subjt:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

Q8L9T8 Arabinogalactan protein 411.0e-1571.43Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH
        M+ SR  FG     +++FAI LP+A  QS APAPAPTSDGTTIDQGIAYVLMLVAL LTYLIH
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH

Q9FK16 Arabinogalactan protein 222.0e-1158.73Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH
        MA  +     +A   ++  I LP+A+  S +PAPAPTSDGT+IDQGIAYVLM+VALALTY IH
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH

Q9M373 Arabinogalactan protein 205.0e-1565.67Show/hide
Query:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS
        SR S   +A  A VFA+  P A  QSLAPAP+PTSDGT+IDQGIAY+LM+VAL LTYLIH  D S+S
Subjt:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS

Arabidopsis top hitse value%identityAlignment
AT2G46330.1 arabinogalactan protein 161.8e-1564.71Show/hide
Query:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF
        SR S    A  + VFA+ L +A  QSLAPAPAPTSDGT+IDQGIAY+LM+VAL LTYLIH  D S+S+
Subjt:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF

AT3G61640.1 arabinogalactan protein 203.5e-1665.67Show/hide
Query:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS
        SR S   +A  A VFA+  P A  QSLAPAP+PTSDGT+IDQGIAY+LM+VAL LTYLIH  D S+S
Subjt:  SRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNS

AT5G24105.1 arabinogalactan protein 417.1e-1771.43Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH
        M+ SR  FG     +++FAI LP+A  QS APAPAPTSDGTTIDQGIAYVLMLVAL LTYLIH
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH

AT5G53250.1 arabinogalactan protein 221.4e-1258.73Show/hide
Query:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH
        MA  +     +A   ++  I LP+A+  S +PAPAPTSDGT+IDQGIAYVLM+VALALTY IH
Subjt:  MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTTCTAGGGCGTCTTTTGGATTCGTGGCCGCCGCCGCGCTCGTCTTCGCCATCTTCTTGCCGGTTGCTCGGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCAC
CAGCGACGGGACAACCATAGACCAAGGGATAGCATATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCCAACAGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTTCTAGGGCGTCTTTTGGATTCGTGGCCGCCGCCGCGCTCGTCTTCGCCATCTTCTTGCCGGTTGCTCGGCCTCAGTCCTTGGCTCCGGCACCCGCTCCCAC
CAGCGACGGGACAACCATAGACCAAGGGATAGCATATGTGTTGATGTTGGTGGCATTGGCACTCACATATCTCATCCACAATGCTGACTTATCCAACAGCTTCTAA
Protein sequenceShow/hide protein sequence
MAVSRASFGFVAAAALVFAIFLPVARPQSLAPAPAPTSDGTTIDQGIAYVLMLVALALTYLIHNADLSNSF