; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030156 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030156
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionD-2-hydroxyglutarate dehydrogenase, mitochondrial
Genome locationscaffold6:9509853..9510551
RNA-Seq ExpressionSpg030156
SyntenySpg030156
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0009853 - photorespiration (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0047545 - 2-hydroxyglutarate dehydrogenase activity (molecular function)
GO:0051990 - (R)-2-hydroxyglutarate dehydrogenase activity (molecular function)
GO:0071949 - FAD binding (molecular function)
InterPro domainsIPR016167 - FAD-binding, type PCMH, subdomain 1
IPR036318 - FAD-binding, type PCMH-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136643.1 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1 [Momordica charantia]5.7e-6180Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        MMTT MK KATNY FRYSR FHSDQR NLNYK SLLLSG   CSK P +RD TP S ++GSI+GCR A +ASA++ FR+  GFQ RRF SLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

XP_022136644.1 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X2 [Momordica charantia]5.7e-6180Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        MMTT MK KATNY FRYSR FHSDQR NLNYK SLLLSG   CSK P +RD TP S ++GSI+GCR A +ASA++ FR+  GFQ RRF SLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

XP_022136645.1 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X3 [Momordica charantia]5.7e-6180Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        MMTT MK KATNY FRYSR FHSDQR NLNYK SLLLSG   CSK P +RD TP S ++GSI+GCR A +ASA++ FR+  GFQ RRF SLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

XP_022985346.1 D-2-hydroxyglutarate dehydrogenase, mitochondrial [Cucurbita maxima]4.8e-6080.65Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        M TTTMK+KA +YLFRYSR FHSDQRLNLN+  S LLSGT LC K P +RDSTPISQY      CR A+HASAIN FRM  GFQ RRFASLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNV+QDEDRLLDANTDW+RKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

XP_038896937.1 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1 [Benincasa hispida]1.8e-5978.71Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        MMTTTM+KK+ ++LFRYSRIFHSDQ L+LN+  SLL SGTSLC          PIS+Y+GS +GCRKAF ASAIN FRMPCGFQ RRF SLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDW+RKYRG+SKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

TrEMBL top hitse value%identityAlignment
A0A6J1C4I6 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X32.7e-6180Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        MMTT MK KATNY FRYSR FHSDQR NLNYK SLLLSG   CSK P +RD TP S ++GSI+GCR A +ASA++ FR+  GFQ RRF SLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

A0A6J1C4W8 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X22.7e-6180Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        MMTT MK KATNY FRYSR FHSDQR NLNYK SLLLSG   CSK P +RD TP S ++GSI+GCR A +ASA++ FR+  GFQ RRF SLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

A0A6J1C845 D-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X12.7e-6180Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        MMTT MK KATNY FRYSR FHSDQR NLNYK SLLLSG   CSK P +RD TP S ++GSI+GCR A +ASA++ FR+  GFQ RRF SLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

A0A6J1EUK5 D-2-hydroxyglutarate dehydrogenase, mitochondrial1.2e-5980.65Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        M TTTMK+KA +YLFRYSR FHSDQR NLN   S LLSGT LC K P +RDSTPISQY      CR A+HASAIN FRM  GFQ RRFASLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDW+RKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

A0A6J1J7W7 D-2-hydroxyglutarate dehydrogenase, mitochondrial2.3e-6080.65Show/hide
Query:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS
        M TTTMK+KA +YLFRYSR FHSDQRLNLN+  S LLSGT LC K P +RDSTPISQY      CR A+HASAIN FRM  GFQ RRFASLS  VQRNPS
Subjt:  MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPS

Query:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        FSRLNSDDIDFFRSILGEKNV+QDEDRLLDANTDW+RKYRGSSKLLLQPRSTEEV
Subjt:  FSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

SwissProt top hitse value%identityAlignment
B8B7X6 Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial2.5e-1950.49Show/hide
Query:  SIQGCRKAFHASAIN--------PFRMPCGFQSRRFASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRST
        SIQG +++ +    N          RM    Q R F+S +  VQRNP++S LNSDD+ +F+SILG+  VVQDEDR+  AN DWM KY+GSS+LLL P+ST
Subjt:  SIQGCRKAFHASAIN--------PFRMPCGFQSRRFASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRST

Query:  EEV
         EV
Subjt:  EEV

O23240 D-2-hydroxyglutarate dehydrogenase, mitochondrial8.1e-1842.97Show/hide
Query:  SLCSKMPNVRD-STPISQYVGSIQGCRKAFHASAIN---PFRMPC-----GFQSRRF----ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDR
        SL S  PN    S  +S +V   +   K F  S  N       PC     G   +++    +S +  +QRNP FS L+S D+ +F+ ILGEKNVV+D++R
Subjt:  SLCSKMPNVRD-STPISQYVGSIQGCRKAFHASAIN---PFRMPC-----GFQSRRF----ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDR

Query:  LLDANTDWMRKYRGSSKLLLQPRSTEEV
        L  ANTDWM KY+GSSKL+L P++T+EV
Subjt:  LLDANTDWMRKYRGSSKLLLQPRSTEEV

P39976 D-2-hydroxyglutarate--pyruvate transhydrogenase DLD34.7e-1046.38Show/hide
Query:  ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVV--QDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        A   P V+RNP+F  L+S+D+ +FRSIL    ++  Q  + L   N DWM+KYRG S L+L P ST++V
Subjt:  ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVV--QDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

P46681 D-2-hydroxyglutarate--pyruvate transhydrogenase DLD23.3e-1144.59Show/hide
Query:  QSRRFASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQ--DEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV
        Q+R  +   P V R+P F +L SDD+++F+SIL E+ +++  + + L   N DWMRKY+G SKL+L+P+S E+V
Subjt:  QSRRFASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQ--DEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV

Q7XI14 Probable D-2-hydroxyglutarate dehydrogenase, mitochondrial2.5e-1950.49Show/hide
Query:  SIQGCRKAFHASAIN--------PFRMPCGFQSRRFASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRST
        SIQG +++ +    N          RM    Q R F+S +  VQRNP++S LNSDD+ +F+SILG+  VVQDEDR+  AN DWM KY+GSS+LLL P+ST
Subjt:  SIQGCRKAFHASAIN--------PFRMPCGFQSRRFASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRST

Query:  EEV
         EV
Subjt:  EEV

Arabidopsis top hitse value%identityAlignment
AT4G36400.1 FAD-linked oxidases family protein5.7e-1942.97Show/hide
Query:  SLCSKMPNVRD-STPISQYVGSIQGCRKAFHASAIN---PFRMPC-----GFQSRRF----ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDR
        SL S  PN    S  +S +V   +   K F  S  N       PC     G   +++    +S +  +QRNP FS L+S D+ +F+ ILGEKNVV+D++R
Subjt:  SLCSKMPNVRD-STPISQYVGSIQGCRKAFHASAIN---PFRMPC-----GFQSRRF----ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDR

Query:  LLDANTDWMRKYRGSSKLLLQPRSTEEV
        L  ANTDWM KY+GSSKL+L P++T+EV
Subjt:  LLDANTDWMRKYRGSSKLLLQPRSTEEV

AT4G36400.2 FAD-linked oxidases family protein5.7e-1942.97Show/hide
Query:  SLCSKMPNVRD-STPISQYVGSIQGCRKAFHASAIN---PFRMPC-----GFQSRRF----ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDR
        SL S  PN    S  +S +V   +   K F  S  N       PC     G   +++    +S +  +QRNP FS L+S D+ +F+ ILGEKNVV+D++R
Subjt:  SLCSKMPNVRD-STPISQYVGSIQGCRKAFHASAIN---PFRMPC-----GFQSRRF----ASLSPAVQRNPSFSRLNSDDIDFFRSILGEKNVVQDEDR

Query:  LLDANTDWMRKYRGSSKLLLQPRSTEEV
        L  ANTDWM KY+GSSKL+L P++T+EV
Subjt:  LLDANTDWMRKYRGSSKLLLQPRSTEEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGACGACGACGATGAAGAAGAAAGCTACCAATTATCTCTTCAGATACTCCCGAATTTTTCACTCTGATCAGCGTTTGAATCTAAATTACAAGATTTCGCTTCTCCT
TTCAGGAACTTCCTTGTGCTCTAAAATGCCTAACGTTAGGGACAGCACGCCAATCTCACAATATGTGGGTTCAATTCAAGGTTGCAGAAAAGCTTTTCACGCTTCTGCGA
TCAATCCTTTTAGAATGCCTTGCGGATTTCAGTCCAGACGCTTTGCTTCATTATCGCCAGCGGTTCAGAGGAACCCTTCATTTTCGAGGTTAAATTCTGATGATATCGAC
TTTTTCCGGAGTATTTTGGGGGAGAAAAATGTAGTTCAGGATGAGGATAGGCTTTTGGATGCAAATACAGATTGGATGCGGAAGTACAGAGGGTCAAGTAAGCTTTTACT
ACAACCTAGGAGCACAGAAGAGGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGACGACGACGATGAAGAAGAAAGCTACCAATTATCTCTTCAGATACTCCCGAATTTTTCACTCTGATCAGCGTTTGAATCTAAATTACAAGATTTCGCTTCTCCT
TTCAGGAACTTCCTTGTGCTCTAAAATGCCTAACGTTAGGGACAGCACGCCAATCTCACAATATGTGGGTTCAATTCAAGGTTGCAGAAAAGCTTTTCACGCTTCTGCGA
TCAATCCTTTTAGAATGCCTTGCGGATTTCAGTCCAGACGCTTTGCTTCATTATCGCCAGCGGTTCAGAGGAACCCTTCATTTTCGAGGTTAAATTCTGATGATATCGAC
TTTTTCCGGAGTATTTTGGGGGAGAAAAATGTAGTTCAGGATGAGGATAGGCTTTTGGATGCAAATACAGATTGGATGCGGAAGTACAGAGGGTCAAGTAAGCTTTTACT
ACAACCTAGGAGCACAGAAGAGGTTTAA
Protein sequenceShow/hide protein sequence
MMTTTMKKKATNYLFRYSRIFHSDQRLNLNYKISLLLSGTSLCSKMPNVRDSTPISQYVGSIQGCRKAFHASAINPFRMPCGFQSRRFASLSPAVQRNPSFSRLNSDDID
FFRSILGEKNVVQDEDRLLDANTDWMRKYRGSSKLLLQPRSTEEV