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Spg030190 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030190
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSodium-bile acid cotransporter, putative
Genome locationscaffold6:13802800..13804835
RNA-Seq ExpressionSpg030190
SyntenySpg030190
Gene Ontology termsGO:0009941 - chloroplast envelope (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004710 - Bile acid:sodium symporter
IPR038770 - Sodium/solute symporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577370.1 putative sodium/metabolite cotransporter BASS1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1473.44Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALPPAM  V+MNMMG++LGSLWRN+ P  A  A
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA

XP_022929228.1 sodium/pyruvate cotransporter BASS2, chloroplastic-like [Cucurbita moschata]2.2e-1473.44Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALPPAM  V+MNMMG++LGSLWRN+ P  A  A
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA

XP_022985340.1 sodium/pyruvate cotransporter BASS2, chloroplastic-like [Cucurbita maxima]2.2e-1473.44Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALPPAM  V+MNMMG++LGSLWRN+ P  A  A
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA

XP_023553087.1 sodium/pyruvate cotransporter BASS2, chloroplastic-like [Cucurbita pepo subsp. pepo]2.2e-1473.44Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALPPAM  V+MNMMG++LGSLWRN+ P  A  A
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA

XP_038905498.1 probable sodium/metabolite cotransporter BASS1, chloroplastic isoform X1 [Benincasa hispida]2.9e-1466.18Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKATIAA
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALP AM  V+MNMMG++LGS WRN +P D+   T+ +
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKATIAA

TrEMBL top hitse value%identityAlignment
A0A0A0L5D6 Uncharacterized protein9.2e-1475.86Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALP AM  V+MNMMG++LGS WRN+EP
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP

A0A1S3BUJ9 probable sodium/metabolite cotransporter BASS1, chloroplastic9.2e-1475.86Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALP AM  V+MNMMG++LGS WRN+EP
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP

A0A5A7V423 Putative sodium/metabolite cotransporter BASS19.2e-1475.86Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALP AM  V+MNMMG++LGS WRN+EP
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP

A0A6J1ERH2 sodium/pyruvate cotransporter BASS2, chloroplastic-like1.1e-1473.44Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALPPAM  V+MNMMG++LGSLWRN+ P  A  A
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA

A0A6J1JB28 sodium/pyruvate cotransporter BASS2, chloroplastic-like1.1e-1473.44Show/hide
Query:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA
        R +  ISLEVGMQNSSLGVVLAT HFS AMVALPPAM  V+MNMMG++LGSLWRN+ P  A  A
Subjt:  RMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFDAPKA

SwissProt top hitse value%identityAlignment
F4JPW1 Probable sodium/metabolite cotransporter BASS5, chloroplastic1.5e-0535.8Show/hide
Query:  FSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRN
        F  L F+ G+     + S+   +    ++  IS E GMQ+S L + LAT  F   +V +PPA+  VVM++MG +L ++W+N
Subjt:  FSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRN

Q1EBV7 Sodium/pyruvate cotransporter BASS2, chloroplastic1.5e-0544.62Show/hide
Query:  WIS----GTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNM
        WIS    G      IS+E GMQ+S+LG +LA  HF+  +VA+P A+ VV M + G+ L   WRN+
Subjt:  WIS----GTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNM

Q7XVB3 Probable sodium/metabolite cotransporter BASS1, chloroplastic2.3e-0649.09Show/hide
Query:  ISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFD
        IS+EVGMQNS LGVVLA+ HF   + A+P A+  V  ++ G+ L  +WR++ P D
Subjt:  ISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEPFD

Q8VYY4 Probable sodium/metabolite cotransporter BASS6, chloroplastic1.2e-0537.36Show/hide
Query:  IILCCTKFDSRCFSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLW
        I+L  T F    F    FLTG V ++   ++        M+  +S E GMQ+S L + LAT  F   +V +PPA+  VVM++MG TL  +W
Subjt:  IILCCTKFDSRCFSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLW

Q93YR2 Probable sodium/metabolite cotransporter BASS1, chloroplastic6.2e-0741.56Show/hide
Query:  HVDQSLYASRYQWISGTRMKS--YISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP
        H+   L+   +  I G  + S   IS+EVGMQNS LGVVLAT HF   + A+P A+  V  +++G+ L  +WR   P
Subjt:  HVDQSLYASRYQWISGTRMKS--YISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP

Arabidopsis top hitse value%identityAlignment
AT1G78560.1 Sodium Bile acid symporter family4.4e-0841.56Show/hide
Query:  HVDQSLYASRYQWISGTRMKS--YISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP
        H+   L+   +  I G  + S   IS+EVGMQNS LGVVLAT HF   + A+P A+  V  +++G+ L  +WR   P
Subjt:  HVDQSLYASRYQWISGTRMKS--YISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNMEP

AT2G26900.1 Sodium Bile acid symporter family1.1e-0644.62Show/hide
Query:  WIS----GTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNM
        WIS    G      IS+E GMQ+S+LG +LA  HF+  +VA+P A+ VV M + G+ L   WRN+
Subjt:  WIS----GTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRNM

AT4G12030.1 bile acid transporter 51.1e-0635.8Show/hide
Query:  FSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRN
        F  L F+ G+     + S+   +    ++  IS E GMQ+S L + LAT  F   +V +PPA+  VVM++MG +L ++W+N
Subjt:  FSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRN

AT4G12030.2 bile acid transporter 51.1e-0635.8Show/hide
Query:  FSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRN
        F  L F+ G+     + S+   +    ++  IS E GMQ+S L + LAT  F   +V +PPA+  VVM++MG +L ++W+N
Subjt:  FSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLWRN

AT4G22840.1 Sodium Bile acid symporter family8.2e-0737.36Show/hide
Query:  IILCCTKFDSRCFSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLW
        I+L  T F    F    FLTG V ++   ++        M+  +S E GMQ+S L + LAT  F   +V +PPA+  VVM++MG TL  +W
Subjt:  IILCCTKFDSRCFSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALPPAMYVVVMNMMGNTLGSLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCACTCGTCCTTGGTACACCCATCAATGGAGGTCCAGATGTTGAACATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAAGCAAGAGTT
ACATATCATTTTGTGTTGCACGAAATTCGATTCTCGTTGCTTTTCGCGTCTTGTTTTTCTGACTGGTCACGTTGACCAGTCATTATATGCTAGCCGCTATCAGTGGATTT
CGGGAACAAGAATGAAGAGCTATATATCCCTCGAGGTTGGGATGCAGAATTCATCATTGGGAGTTGTATTGGCAACAACACATTTCAGTTTAGCAATGGTGGCATTGCCC
CCAGCAATGTACGTTGTGGTAATGAACATGATGGGCAACACTCTTGGTTCTTTATGGAGAAATATGGAGCCTTTTGATGCACCAAAAGCCACTATTGCAGCTACCCAGTC
ATATTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCACTCGTCCTTGGTACACCCATCAATGGAGGTCCAGATGTTGAACATGGGTACAATGAATGGTATGCTAGGATTAGCAGACGATTCATCACACAAGCAAGAGTT
ACATATCATTTTGTGTTGCACGAAATTCGATTCTCGTTGCTTTTCGCGTCTTGTTTTTCTGACTGGTCACGTTGACCAGTCATTATATGCTAGCCGCTATCAGTGGATTT
CGGGAACAAGAATGAAGAGCTATATATCCCTCGAGGTTGGGATGCAGAATTCATCATTGGGAGTTGTATTGGCAACAACACATTTCAGTTTAGCAATGGTGGCATTGCCC
CCAGCAATGTACGTTGTGGTAATGAACATGATGGGCAACACTCTTGGTTCTTTATGGAGAAATATGGAGCCTTTTGATGCACCAAAAGCCACTATTGCAGCTACCCAGTC
ATATTTTTAG
Protein sequenceShow/hide protein sequence
MLHSSLVHPSMEVQMLNMGTMNGMLGLADDSSHKQELHIILCCTKFDSRCFSRLVFLTGHVDQSLYASRYQWISGTRMKSYISLEVGMQNSSLGVVLATTHFSLAMVALP
PAMYVVVMNMMGNTLGSLWRNMEPFDAPKATIAATQSYF