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Spg030209 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030209
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionfibroin heavy chain-like
Genome locationscaffold6:14147349..14148071
RNA-Seq ExpressionSpg030209
SyntenySpg030209
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060661.1 hypothetical protein E6C27_scaffold22G005540 [Cucumis melo var. makuwa]1.4e-3449.58Show/hide
Query:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYG--HGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPG-GKGVSNFGAGPKAGPGGVSHVGGGPRAGP
        M+SLKY LL PF+FLCLS TFA+ + N ++G   GS       P AGPGV+    NIG GPKAGP AG G G G+S+    P            GP+AGP
Subjt:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYG--HGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPG-GKGVSNFGAGPKAGPGGVSHVGGGPRAGP

Query:  GIEGRVSSVGAGPEIERGVS-VGAGPRAGPGARRGVDPIVNGVGVGIGVGYRPGFG----------PGWNGPG-IGGGLYGDCILGYVCPANERRECNKF
           G       G ++  GVS + AGPRAGP         VNG GVG+GV   P FG           GW  PG I    YG+C+LGYVCP N    C+KF
Subjt:  GIEGRVSSVGAGPEIERGVS-VGAGPRAGPGARRGVDPIVNGVGVGIGVGYRPGFG----------PGWNGPG-IGGGLYGDCILGYVCPANERRECNKF

Query:  AYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS
        AY  C+S+NFHPL+AS DLHEV+INWAKSKP A AQHG+S
Subjt:  AYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS

KAG6577377.1 hypothetical protein SDJN03_24951, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4349.66Show/hide
Query:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFG----PRAGPGVEGDAINIGAGP-------------KAGPWAGPGGKG-VSNF-------
        M SLKY LL PFVFLCLS TFAN++ NS+   GSG D+G G    P AGPGVE    N+ AGP             KAGP AGPG +G VS+        
Subjt:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFG----PRAGPGVEGDAINIGAGP-------------KAGPWAGPGGKG-VSNF-------

Query:  -GAGPKAGPGG---VSHVGGGPR----AGPGIEGRVSSV--------GAGPEIERGVS-VGAGPRAGP---------------GARRGVDPIVNGVGVGI
          AGPKAGPG    VS V  GPR    AGPG EG VS V         AGP  E  VS V AGP  GP               G RR VDP++NG+G+G+
Subjt:  -GAGPKAGPGG---VSHVGGGPR----AGPGIEGRVSSV--------GAGPEIERGVS-VGAGPRAGP---------------GARRGVDPIVNGVGVGI

Query:  GV--GYRPGF------GPGWNGPGI---GGGLYGDCILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVEINWAK-SKPVAMAQHG
        GV  GYR GF      G  W GPGI   GGG+  +C LGYVCP   RR C+KF+Y +C+++ FHPL ASM LHEVE+ WAK SKP A  Q+G
Subjt:  GV--GYRPGF------GPGWNGPGI---GGGLYGDCILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVEINWAK-SKPVAMAQHG

KGN56231.1 hypothetical protein Csa_011503 [Cucumis sativus]3.7e-4350.6Show/hide
Query:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGP------GGVSHVGG---
        M+SLKY LL PF+FLCLS TFAN + N + G      +GFG  + P  +             P AGP  +GVSNFG GPKAGP      GG+S+V     
Subjt:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGP------GGVSHVGG---

Query:  -GPRAGPGIEGRVSSVGAGPEIER-GV-SVGAGPRAGPGARRGVDPIVNGVGVGIGV-----------GYRPGFGPGWNGPG-IGGGLYGDCILGYVCPA
         GP+AGPG++  +S+VGAGP + + GV S+ AGPRAGP   +GVDPIV G+GVG+GV           G RPG G GW GPG I    Y +C+LGYVCP 
Subjt:  -GPRAGPGIEGRVSSVGAGPEIER-GV-SVGAGPRAGPGARRGVDPIVNGVGVGIGV-----------GYRPGFGPGWNGPG-IGGGLYGDCILGYVCPA

Query:  NERRECNKFAYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS
        N    C K  Y  CES+NF PL+AS +LH+V+INWAKSK V  AQHG+S
Subjt:  NERRECNKFAYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS

XP_022929340.1 fibroin heavy chain-like [Cucurbita moschata]2.0e-4450.58Show/hide
Query:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFG----PRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGPGGVSHVG------
        M SLKY LL PFVFLCLS TFAN++ NS+   GSG D+G G    P AGPGVE    N+ AGP A  W      G+    AGPKAGPG    V       
Subjt:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFG----PRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGPGGVSHVG------

Query:  -GGPRAGPGIEGRVSSVGAGPEIERGVSVGAGPRAGP-----------GARRGVDPIVNGVGVGIGV--GYRPGF------GPGWNGPGI---GGGLYGD
          GP+AGPG EG VS+V AGP +        GPRA P           G RR VDP++NG+G+G+GV  GYR GF      G  W GPGI   GGG+  +
Subjt:  -GGPRAGPGIEGRVSSVGAGPEIERGVSVGAGPRAGP-----------GARRGVDPIVNGVGVGIGV--GYRPGF------GPGWNGPGI---GGGLYGD

Query:  CILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVEINWAK-SKPVAMAQHG
        C LGYVCP   RR C+KF+Y +C+++ FHPL ASM LHEVE+ WAK SKP A  Q+G
Subjt:  CILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVEINWAK-SKPVAMAQHG

XP_023551823.1 fibroin heavy chain-like isoform X1 [Cucurbita pepo subsp. pepo]1.7e-3550.93Show/hide
Query:  GPRAGPGVEGDAINIGAGPKAGPWAGPGG-KGVSNFGAGPKAGP-------GGVSHVGGGPR----AGPGIEGRVSSVGAGPEIERGVSVGAGPRAGP--
        GP+AGPG EG   ++ AGP+AG  AGPG  + VS+  AGP+AGP       G VS V  GPR    AGPG EG V++V AGP +        GPRA P  
Subjt:  GPRAGPGVEGDAINIGAGPKAGPWAGPGG-KGVSNFGAGPKAGP-------GGVSHVGGGPR----AGPGIEGRVSSVGAGPEIERGVSVGAGPRAGP--

Query:  ---------GARRGVDPIVNGVGVGIGV--GYRPGF------GPGWNGPGIGG-GLYGDCILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVE
                 G RR VDP++NG+G+G+GV  GYR GF      G  W GPGIGG G+  +C LGYVCP   RR C+KF+Y +C+S+ FHPL ASM LHEVE
Subjt:  ---------GARRGVDPIVNGVGVGIGV--GYRPGF------GPGWNGPGIGG-GLYGDCILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVE

Query:  INWAK-SKPVAMAQHG
        + WAK SKP A  Q+G
Subjt:  INWAK-SKPVAMAQHG

TrEMBL top hitse value%identityAlignment
A0A0A0L7X7 Uncharacterized protein1.8e-4350.6Show/hide
Query:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGP------GGVSHVGG---
        M+SLKY LL PF+FLCLS TFAN + N + G      +GFG  + P  +             P AGP  +GVSNFG GPKAGP      GG+S+V     
Subjt:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGP------GGVSHVGG---

Query:  -GPRAGPGIEGRVSSVGAGPEIER-GV-SVGAGPRAGPGARRGVDPIVNGVGVGIGV-----------GYRPGFGPGWNGPG-IGGGLYGDCILGYVCPA
         GP+AGPG++  +S+VGAGP + + GV S+ AGPRAGP   +GVDPIV G+GVG+GV           G RPG G GW GPG I    Y +C+LGYVCP 
Subjt:  -GPRAGPGIEGRVSSVGAGPEIER-GV-SVGAGPRAGPGARRGVDPIVNGVGVGIGV-----------GYRPGFGPGWNGPG-IGGGLYGDCILGYVCPA

Query:  NERRECNKFAYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS
        N    C K  Y  CES+NF PL+AS +LH+V+INWAKSK V  AQHG+S
Subjt:  NERRECNKFAYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS

A0A5A7V4J6 Uncharacterized protein6.8e-3549.58Show/hide
Query:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYG--HGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPG-GKGVSNFGAGPKAGPGGVSHVGGGPRAGP
        M+SLKY LL PF+FLCLS TFA+ + N ++G   GS       P AGPGV+    NIG GPKAGP AG G G G+S+    P            GP+AGP
Subjt:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYG--HGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPG-GKGVSNFGAGPKAGPGGVSHVGGGPRAGP

Query:  GIEGRVSSVGAGPEIERGVS-VGAGPRAGPGARRGVDPIVNGVGVGIGVGYRPGFG----------PGWNGPG-IGGGLYGDCILGYVCPANERRECNKF
           G       G ++  GVS + AGPRAGP         VNG GVG+GV   P FG           GW  PG I    YG+C+LGYVCP N    C+KF
Subjt:  GIEGRVSSVGAGPEIERGVS-VGAGPRAGPGARRGVDPIVNGVGVGIGVGYRPGFG----------PGWNGPG-IGGGLYGDCILGYVCPANERRECNKF

Query:  AYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS
        AY  C+S+NFHPL+AS DLHEV+INWAKSKP A AQHG+S
Subjt:  AYESCESFNFHPLTASMDLHEVEINWAKSKPVAMAQHGKS

A0A6J1EU53 fibroin heavy chain-like9.5e-4550.58Show/hide
Query:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFG----PRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGPGGVSHVG------
        M SLKY LL PFVFLCLS TFAN++ NS+   GSG D+G G    P AGPGVE    N+ AGP A  W      G+    AGPKAGPG    V       
Subjt:  MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFG----PRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGPGGVSHVG------

Query:  -GGPRAGPGIEGRVSSVGAGPEIERGVSVGAGPRAGP-----------GARRGVDPIVNGVGVGIGV--GYRPGF------GPGWNGPGI---GGGLYGD
          GP+AGPG EG VS+V AGP +        GPRA P           G RR VDP++NG+G+G+GV  GYR GF      G  W GPGI   GGG+  +
Subjt:  -GGPRAGPGIEGRVSSVGAGPEIERGVSVGAGPRAGP-----------GARRGVDPIVNGVGVGIGV--GYRPGF------GPGWNGPGI---GGGLYGD

Query:  CILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVEINWAK-SKPVAMAQHG
        C LGYVCP   RR C+KF+Y +C+++ FHPL ASM LHEVE+ WAK SKP A  Q+G
Subjt:  CILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVEINWAK-SKPVAMAQHG

A0A7R9G286 Hypothetical protein1.1e-0846.31Show/hide
Query:  GHGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGV-----SNFGAGPKAGPGGV--------SHVGGGPRAGPGIEGRVS---SVGAGPEIER
        G G GP +G GP  GPGV G     G G   GP  GPGG G      S  G GP  GPGGV          VGGGP  GPG  G       VG GP    
Subjt:  GHGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGV-----SNFGAGPKAGPGGV--------SHVGGGPRAGPGIEGRVS---SVGAGPEIER

Query:  GVSVGAGPRAGPGARRGVDPIVNGVGVGIGVGYRPGFGPGWNGPGIGGG
        G  VG GP  GPG   G      GVGVG G G   G GPG+ GPG+GGG
Subjt:  GVSVGAGPRAGPGARRGVDPIVNGVGVGIGVGYRPGFGPGWNGPGIGGG

U3KJI4 Uncharacterized protein1.1e-0851.72Show/hide
Query:  GFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGPGGVSHVGGGPRAGPGIEGRVSSVGAGPEIERGVSVGAGPRAGPGARRGVDPIVNG
        G GP AGPG  G     GAGP AGP AGPG    +  GAGP AGPG  +  G GP AGPG     +  GAGP    G   GAGP AGPGA  G  P   G
Subjt:  GFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGPGGVSHVGGGPRAGPGIEGRVSSVGAGPEIERGVSVGAGPRAGPGARRGVDPIVNG

Query:  VGVGIGVGYRPGFGPG
         G G G G  PG GPG
Subjt:  VGVGIGVGYRPGFGPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCTCAAATATCTCCTTCTCTGTCCCTTTGTTTTCCTCTGCTTAAGCTCCACCTTCGCCAACAAACTTCTCAACTCCAACTATGGACACGGTTCTGGTCCCGA
TATCGGGTTTGGACCGAGAGCTGGGCCGGGTGTTGAGGGAGACGCAATCAATATCGGAGCTGGTCCAAAAGCCGGGCCATGGGCTGGGCCGGGAGGTAAGGGAGTAAGCA
ATTTTGGGGCTGGTCCGAAAGCTGGGCCGGGAGGAGTAAGCCATGTCGGAGGTGGCCCGAGAGCTGGGCCGGGAATTGAGGGAAGAGTAAGCAGTGTCGGGGCTGGGCCG
GAAATTGAGAGAGGAGTGAGTGTCGGGGCTGGGCCGAGAGCGGGGCCGGGAGCTAGGAGAGGTGTTGATCCAATTGTTAATGGAGTCGGAGTTGGAATCGGAGTTGGATA
CAGGCCAGGATTTGGGCCGGGCTGGAATGGGCCAGGAATTGGTGGTGGGCTGTACGGTGATTGCATATTGGGCTACGTTTGTCCAGCGAATGAACGTAGAGAATGCAACA
AATTTGCTTATGAAAGTTGCGAATCTTTTAACTTTCATCCATTGACTGCTTCGATGGATCTGCACGAAGTTGAAATCAATTGGGCCAAAAGCAAGCCTGTTGCAATGGCC
CAACATGGCAAATCTGAACTACACACATCACCGCCCACTAAGAAGGCCCAACATGGTGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCCCTCAAATATCTCCTTCTCTGTCCCTTTGTTTTCCTCTGCTTAAGCTCCACCTTCGCCAACAAACTTCTCAACTCCAACTATGGACACGGTTCTGGTCCCGA
TATCGGGTTTGGACCGAGAGCTGGGCCGGGTGTTGAGGGAGACGCAATCAATATCGGAGCTGGTCCAAAAGCCGGGCCATGGGCTGGGCCGGGAGGTAAGGGAGTAAGCA
ATTTTGGGGCTGGTCCGAAAGCTGGGCCGGGAGGAGTAAGCCATGTCGGAGGTGGCCCGAGAGCTGGGCCGGGAATTGAGGGAAGAGTAAGCAGTGTCGGGGCTGGGCCG
GAAATTGAGAGAGGAGTGAGTGTCGGGGCTGGGCCGAGAGCGGGGCCGGGAGCTAGGAGAGGTGTTGATCCAATTGTTAATGGAGTCGGAGTTGGAATCGGAGTTGGATA
CAGGCCAGGATTTGGGCCGGGCTGGAATGGGCCAGGAATTGGTGGTGGGCTGTACGGTGATTGCATATTGGGCTACGTTTGTCCAGCGAATGAACGTAGAGAATGCAACA
AATTTGCTTATGAAAGTTGCGAATCTTTTAACTTTCATCCATTGACTGCTTCGATGGATCTGCACGAAGTTGAAATCAATTGGGCCAAAAGCAAGCCTGTTGCAATGGCC
CAACATGGCAAATCTGAACTACACACATCACCGCCCACTAAGAAGGCCCAACATGGTGTCTAA
Protein sequenceShow/hide protein sequence
MSSLKYLLLCPFVFLCLSSTFANKLLNSNYGHGSGPDIGFGPRAGPGVEGDAINIGAGPKAGPWAGPGGKGVSNFGAGPKAGPGGVSHVGGGPRAGPGIEGRVSSVGAGP
EIERGVSVGAGPRAGPGARRGVDPIVNGVGVGIGVGYRPGFGPGWNGPGIGGGLYGDCILGYVCPANERRECNKFAYESCESFNFHPLTASMDLHEVEINWAKSKPVAMA
QHGKSELHTSPPTKKAQHGV