; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030244 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030244
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncalmodulin-like
Genome locationscaffold6:15286689..15286961
RNA-Seq ExpressionSpg030244
SyntenySpg030244
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]9.3e-3277.78Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI
        M R SKTY    +LSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP YRARHALFH DSDRDGFI EKDFELL+NYA +R+YTVI
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3382.95Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYT
        M R SKTYQ  PKLSREQLS+IFRNHD DGDGRL+T+ELT AFRYIGA LPSYRA HAL HTDSD DGFIGEKDFELL+NYA KRKYT
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYT

KAG6600744.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]7.9e-3174.44Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI
        MPR +KTY   P++SREQL LIFRNHDD+GDGRL+++ELT+AF YIGALLPS+RA HAL +TDSDRDGFI EKDFE LI+YA KR+YTVI
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3483.33Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI
        M R SKTYQ  PKLSREQLS+IFRNHD DGDGRL+T+ELT AFRYIGA LPSYRA HAL HTDSD DGFIGEKDFELL+NYA KRKYTVI
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]7.9e-3175.56Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI
        M R SK Y    KLSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP+YRARHAL H DSDRDGFIGEKDFE L+NYA +R+YT+I
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein3.8e-3175.56Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI
        M R SK Y    KLSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP+YRARHAL H DSDRDGFIGEKDFE L+NYA +R+YT+I
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI

A0A438DYH7 Uncharacterized protein3.6e-1347.56Show/hide
Query:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKY
        KT      L  +QL  IF+ HD +GDG+LN +EL +AF+++GAL+P +RA  AL H D+D DG I EK+ + L+ YA K  Y
Subjt:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKY

A0A5A7VDB9 Putative calcium-binding protein CML274.5e-3277.78Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI
        M R SKTY    +LSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP YRARHALFH DSDRDGFI EKDFELL+NYA +R+YTVI
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI

A0A5N6RQV2 Uncharacterized protein4.7e-1350.67Show/hide
Query:  SREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTV
        +R+QL  IFR+HD DGDG+L+  E+  AF Y+G+   SYRA  AL H DSD DG++GE++ + L++YA K  YT+
Subjt:  SREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTV

A5AWP8 Uncharacterized protein3.3e-1447.62Show/hide
Query:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTV
        KT      L  +QL  IF+ HD +GDG+LN +EL +AF+++GAL+P +RA  AL H D+D DG I EK+ + L+ YA K  YT+
Subjt:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTV

SwissProt top hitse value%identityAlignment
O81701 Polcalcin Aln g 42.3e-0437.04Show/hide
Query:  IFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        IF+  D +GDG+++ SEL +A + +G++ P    +H +   D+D DGFI  ++F
Subjt:  IFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF

Q0DJV6 Probable calcium-binding protein CML181.2e-0537.93Show/hide
Query:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        +L  +FR +D +GDG+++  EL    R +GA L     R  +   DSDRDGF+   +F
Subjt:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF

Q39419 Polcalcin Bet v 41.0e-0436.51Show/hide
Query:  KLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        K  RE+   IF+  D +GDG+++ +EL EA + +G++ P    +H +   D+D DGFI  ++F
Subjt:  KLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML153.8e-0431.25Show/hide
Query:  PKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        P  + ++   +FR  D +GDGR++ +EL   FR +G  +        +   DSD DG+I   +F
Subjt:  PKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF

Q8L3R2 Probable calcium-binding protein CML411.2e-0534.72Show/hide
Query:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        N K++Q     S+E+L  +F + D DGDG+++  EL   F  +G  +    A+ A+   D+D DG +G +DF
Subjt:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF

Arabidopsis top hitse value%identityAlignment
AT1G73630.1 EF hand calcium-binding protein family1.8e-0432.76Show/hide
Query:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        +L  +F   D +GDG+++ SEL   F+ +G           L   D D DGFI +++F
Subjt:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF

AT3G50770.1 calmodulin-like 418.5e-0734.72Show/hide
Query:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        N K++Q     S+E+L  +F + D DGDG+++  EL   F  +G  +    A+ A+   D+D DG +G +DF
Subjt:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF

AT4G03290.1 EF hand calcium-binding protein family3.6e-0531.03Show/hide
Query:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF
        +L+ +F+  D DGDG++ T EL E+F+ +G ++P       +   D + DG +  ++F
Subjt:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCAACAGCAAAACATACCAGCAGATGCCGAAGCTGTCAAGGGAGCAACTAAGCCTAATCTTCAGAAATCACGATGACGACGGCGACGGCCGCCTCAATACCTC
CGAGCTAACCGAAGCCTTCCGGTACATCGGCGCCCTTCTTCCATCGTATAGAGCACGCCACGCTCTTTTTCACACCGATTCCGATAGAGACGGATTTATCGGCGAGAAGG
ATTTCGAATTGCTCATCAATTATGCCCACAAACGGAAATACACCGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCAACAGCAAAACATACCAGCAGATGCCGAAGCTGTCAAGGGAGCAACTAAGCCTAATCTTCAGAAATCACGATGACGACGGCGACGGCCGCCTCAATACCTC
CGAGCTAACCGAAGCCTTCCGGTACATCGGCGCCCTTCTTCCATCGTATAGAGCACGCCACGCTCTTTTTCACACCGATTCCGATAGAGACGGATTTATCGGCGAGAAGG
ATTTCGAATTGCTCATCAATTATGCCCACAAACGGAAATACACCGTCATTTGA
Protein sequenceShow/hide protein sequence
MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARHALFHTDSDRDGFIGEKDFELLINYAHKRKYTVI