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Spg030254 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030254
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationscaffold6:15538192..15538470
RNA-Seq ExpressionSpg030254
SyntenySpg030254
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]4.9e-2872.83Show/hide
Query:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI
        M R  +TY  R +LSREQL LIFRNHD D+DGRLS  ELTEAFRYIGA LPP+RA  AL H DSDRDG  FI +KDFELLVNYAE+R+YTVI
Subjt:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2773.33Show/hide
Query:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYT
        M R+ +TY+ RPKLSREQL +IFRNHDGD DGRLS  ELT AFRYIGA LP +RA  ALLH DSD DG  FI +KDFELLVNYAE+RKYT
Subjt:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYT

KAG6600743.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia]4.6e-2669.57Show/hide
Query:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI
        M R+ + Y QRPK+SR+QL +IFRNHD D DGRLS AELT+AF YIGALLP FRA  ALL+ DSDRDG  FID+KDFE L++YAE+R+YTVI
Subjt:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]4.9e-2873.91Show/hide
Query:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI
        M R+ +TY+ RPKLSREQL +IFRNHDGD DGRLS  ELT AFRYIGA LP +RA  ALLH DSD DG  FI +KDFELLVNYAE+RKYTVI
Subjt:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]2.7e-2670.65Show/hide
Query:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI
        M R+ + Y  R KLSREQL LIFRNHD D+DGRLS  ELTEAFRYIGA LP +RA  ALLH DSDRDG  FI +KDFE LVNYAE+R+YT+I
Subjt:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein1.3e-2670.65Show/hide
Query:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI
        M R+ + Y  R KLSREQL LIFRNHD D+DGRLS  ELTEAFRYIGA LP +RA  ALLH DSDRDG  FI +KDFE LVNYAE+R+YT+I
Subjt:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI

A0A5A7VDB9 Putative calcium-binding protein CML272.4e-2872.83Show/hide
Query:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI
        M R  +TY  R +LSREQL LIFRNHD D+DGRLS  ELTEAFRYIGA LPP+RA  AL H DSDRDG  FI +KDFELLVNYAE+R+YTVI
Subjt:  MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI

A0A5N6RQU3 Uncharacterized protein8.5e-1050Show/hide
Query:  LSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTV
        L+ EQL  IFR HD +RDG LS AEL  AF+ +GAL+P  RAF  L   D++ DG  FI +++   LV YA +  YTV
Subjt:  LSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTV

A0A6J1CS20 calmodulin-like protein 56.5e-1047.5Show/hide
Query:  KLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI
        KL RE++  IFR HD + DG LS  EL+ AF  +GALLP +RA C +L  D+D DG   I  ++ E +V+YA + KY +I
Subjt:  KLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI

A5AWP8 Uncharacterized protein2.5e-0943.02Show/hide
Query:  ETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTV
        +T   +  L  +QL  IF+ HD + DG+L+ AEL +AF+++GAL+P +RA  AL H D+D DG   I +K+ + LV YA +  YT+
Subjt:  ETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTV

SwissProt top hitse value%identityAlignment
Q0DJV6 Probable calcium-binding protein CML185.1e-0437.74Show/hide
Query:  IFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQ
        +FR +D + DG++S  EL    R +GA L P      +  +DSDRDGF+ + +
Subjt:  IFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQ

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein9.0e-0433.8Show/hide
Query:  IFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLV----NYAEERK
        +F   D +RDGR+S  EL ++F+ +G  +    A  A+   D D DG   +D  +F LL+     + EE K
Subjt:  IFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLV----NYAEERK

AT1G76650.1 calmodulin-like 385.3e-0432.39Show/hide
Query:  QLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERK
        +L  +F   D +RDGR+S  EL ++F  +G  L    A  A+   D+D DG +  ++    + V+  EE+K
Subjt:  QLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERK

AT1G76650.3 calmodulin-like 385.3e-0432.39Show/hide
Query:  QLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERK
        +L  +F   D +RDGR+S  EL ++F  +G  L    A  A+   D+D DG +  ++    + V+  EE+K
Subjt:  QLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATCGCGAAGTCGAAACGTACGAGCAGAGGCCGAAGCTATCAAGAGAGCAACTATGCCTAATCTTCAGAAACCATGATGGCGACCGTGACGGCCGCCTTAGCTTCGC
CGAGCTCACTGAAGCTTTTCGGTACATCGGAGCCCTTCTACCGCCGTTTAGAGCTTTCTGCGCTCTTCTTCATGTTGATTCTGATAGAGATGGATTCATCTTCATCGACC
AGAAGGATTTCGAATTGCTTGTCAATTATGCCGAGGAACGGAAATACACCGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATCGCGAAGTCGAAACGTACGAGCAGAGGCCGAAGCTATCAAGAGAGCAACTATGCCTAATCTTCAGAAACCATGATGGCGACCGTGACGGCCGCCTTAGCTTCGC
CGAGCTCACTGAAGCTTTTCGGTACATCGGAGCCCTTCTACCGCCGTTTAGAGCTTTCTGCGCTCTTCTTCATGTTGATTCTGATAGAGATGGATTCATCTTCATCGACC
AGAAGGATTTCGAATTGCTTGTCAATTATGCCGAGGAACGGAAATACACCGTCATTTGA
Protein sequenceShow/hide protein sequence
MHREVETYEQRPKLSREQLCLIFRNHDGDRDGRLSFAELTEAFRYIGALLPPFRAFCALLHVDSDRDGFIFIDQKDFELLVNYAEERKYTVI