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Spg030266 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030266
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEF hand calcium-binding protein family
Genome locationscaffold6:15451827..15452099
RNA-Seq ExpressionSpg030266
SyntenySpg030266
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064376.1 putative calcium-binding protein CML27 [Cucumis melo var. makuwa]8.7e-3074.44Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM
        M R SKTY    +LSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP YRAR AL H+DSDRDGFI EKDFELL+NYA +R+YTV+
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM

KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3281.82Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYT
        M R SKTYQ  PKLSREQLS+IFRNHD DGDGRL+T+ELT AFRYIGA LPSYRA  ALLH+DSD DGFIGEKDFELL+NYA KRKYT
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYT

KAG6600744.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2972.22Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM
        MPR +KTY   P++SREQL LIFRNHDD+GDGRL+++ELT+AF YIGALLPS+RA  ALL++DSDRDGFI EKDFE LI+YA KR+YTV+
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3381.11Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM
        M R SKTYQ  PKLSREQLS+IFRNHD DGDGRL+T+ELT AFRYIGA LPSYRA  ALLH+DSD DGFIGEKDFELL+NYA KRKYTV+
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM

KGN55185.1 hypothetical protein Csa_012915 [Cucumis sativus]5.1e-3074.44Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM
        M R SK Y    KLSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP+YRAR ALLH+DSDRDGFIGEKDFE L+NYA +R+YT++
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein2.5e-3074.44Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM
        M R SK Y    KLSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP+YRAR ALLH+DSDRDGFIGEKDFE L+NYA +R+YT++
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM

A0A438DYH7 Uncharacterized protein1.6e-1348.78Show/hide
Query:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKY
        KT      L  +QL  IF+ HD +GDG+LN +EL +AF+++GAL+P +RA RAL H+D+D DG I EK+ + L+ YA K  Y
Subjt:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKY

A0A5A7VDB9 Putative calcium-binding protein CML274.2e-3074.44Show/hide
Query:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM
        M R SKTY    +LSREQL LIFRNHD D DGRL+T+ELTEAFRYIGA LP YRAR AL H+DSDRDGFI EKDFELL+NYA +R+YTV+
Subjt:  MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM

A0A5N6RQV2 Uncharacterized protein1.2e-1352Show/hide
Query:  SREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTV
        +R+QL  IFR+HD DGDG+L+  E+  AF Y+G+   SYRA  ALLH+DSD DG++GE++ + L++YA K  YT+
Subjt:  SREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTV

A5AWP8 Uncharacterized protein1.5e-1448.81Show/hide
Query:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTV
        KT      L  +QL  IF+ HD +GDG+LN +EL +AF+++GAL+P +RA RAL H+D+D DG I EK+ + L+ YA K  YT+
Subjt:  KTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTV

SwissProt top hitse value%identityAlignment
P58171 Polcalcin Syr v 31.3e-0435.59Show/hide
Query:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFE
        +L  IF+  D +GDG++++SEL E  + +G++ P    +R +   D+D DGFI  ++F+
Subjt:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFE

Q0DJV6 Probable calcium-binding protein CML185.4e-0639.66Show/hide
Query:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF
        +L  +FR +D +GDG+++  EL    R +GA L     RR +   DSDRDGF+   +F
Subjt:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF

Q6L4D4 Probable calcium-binding protein CML155.9e-0532.81Show/hide
Query:  PKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF
        P  + ++   +FR  D +GDGR++ +EL   FR +G  +      R +  +DSD DG+I   +F
Subjt:  PKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF

Q84V36 Polcalcin Che a 31.3e-0438.89Show/hide
Query:  IFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF
        IF+  D +GDG++++SEL +A + +G++ P    RR +   D+D DGFI   +F
Subjt:  IFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF

Q8L3R2 Probable calcium-binding protein CML412.0e-0534.72Show/hide
Query:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF
        N K++Q     S+E+L  +F + D DGDG+++  EL   F  +G  +    A+ A+   D+D DG +G +DF
Subjt:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein3.6e-0533.87Show/hide
Query:  EQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELL
        E+L  +F   D +GDG+++  EL   F+ +G         R L   D+DRDG+I   +F  L
Subjt:  EQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELL

AT1G18210.2 Calcium-binding EF-hand family protein3.6e-0533.87Show/hide
Query:  EQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELL
        E+L  +F   D +GDG+++  EL   F+ +G         R L   D+DRDG+I   +F  L
Subjt:  EQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELL

AT1G73630.1 EF hand calcium-binding protein family1.0e-0434.48Show/hide
Query:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF
        +L  +F   D +GDG+++ SEL   F+ +G         R L   D D DGFI +++F
Subjt:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF

AT3G50770.1 calmodulin-like 411.4e-0634.72Show/hide
Query:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF
        N K++Q     S+E+L  +F + D DGDG+++  EL   F  +G  +    A+ A+   D+D DG +G +DF
Subjt:  NSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF

AT4G03290.1 EF hand calcium-binding protein family3.6e-0531.03Show/hide
Query:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF
        +L+ +F+  D DGDG++ T EL E+F+ +G ++P     + +   D + DG +  ++F
Subjt:  QLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCAACAGCAAAACATACCAGCAGATGCCGAAGCTGTCAAGGGAGCAACTAAGCCTAATCTTCAGAAACCACGATGACGACGGCGACGGCCGCCTCAATACCTC
TGAGCTAACCGAAGCCTTCCGGTACATCGGCGCCCTTCTTCCATCGTATAGAGCACGCCGCGCTCTTCTTCACTCCGATTCCGATAGAGACGGATTCATCGGCGAGAAGG
ATTTCGAATTGCTCATCAATTATGCCCACAAACGCAAATACACCGTCATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCAACAGCAAAACATACCAGCAGATGCCGAAGCTGTCAAGGGAGCAACTAAGCCTAATCTTCAGAAACCACGATGACGACGGCGACGGCCGCCTCAATACCTC
TGAGCTAACCGAAGCCTTCCGGTACATCGGCGCCCTTCTTCCATCGTATAGAGCACGCCGCGCTCTTCTTCACTCCGATTCCGATAGAGACGGATTCATCGGCGAGAAGG
ATTTCGAATTGCTCATCAATTATGCCCACAAACGCAAATACACCGTCATGTGA
Protein sequenceShow/hide protein sequence
MPRNSKTYQQMPKLSREQLSLIFRNHDDDGDGRLNTSELTEAFRYIGALLPSYRARRALLHSDSDRDGFIGEKDFELLINYAHKRKYTVM