; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030271 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030271
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGirdin-like
Genome locationscaffold6:13613290..13614604
RNA-Seq ExpressionSpg030271
SyntenySpg030271
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK18656.1 girdin-like [Cucumis melo var. makuwa]2.5e-2933.68Show/hide
Query:  VTPEYLQWRI-KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE
        VT EY  W+  +R+ I   +R+ V      + ++PNQ   +  +L  +N+ L+ ENEKL++E  + M+ +     +LE+ +   KN+ K E+D +  D+E
Subjt:  VTPEYLQWRI-KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE

Query:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ
         RR+ K N +L+NE   L+    S++  IKDL  GKE  LE                           +T+DNL + M  +SEE E  K+Y  SL  QL 
Subjt:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ

Query:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        A Q +S++++ E   L   Y  ++ DY +   D Q+++ +V+QT+  +++M++RA GFAEWA DLR     M  +A++L +FL  I R+LG
Subjt:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

TYK23632.1 girdin-like [Cucumis melo var. makuwa]3.3e-2933.57Show/hide
Query:  KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHAL
        +R  I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + ++  T    +LE+ +   KN+ K E+D + LD+E RR+ K N  L
Subjt:  KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHAL

Query:  RNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSL
        +NE   L+    SQ+  IKDL  GKE  LE                           +T+D+L + M  +SEE E  K+Y  SL  QL A Q +S++++ 
Subjt:  RNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSL

Query:  ERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        E   L   Y  ++ DY +   D Q+++ +V+QT+  ++++++RA GFAEWA DLR N   +  +A++L  FL  I R+LG
Subjt:  ERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

TYK23955.1 girdin-like [Cucumis melo var. makuwa]7.3e-2932.99Show/hide
Query:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE
        VT  Y  W+  R K I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + M+       +LE+ +   KN+ K E++ + LD+E
Subjt:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE

Query:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ
         RR+ K N +L+NE   L+    S++  IKDL  GKE  LE                           + +D+L + M  +SEE E  K+Y  SL  QL 
Subjt:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ

Query:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        AFQ +S++++ E   LK  Y  ++ DY +   D Q+++ +++QT+  ++++++RA  FAEWA DLR N   + S+A++L  FL  I ++LG
Subjt:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

XP_016900531.1 PREDICTED: girdin-like [Cucumis melo]7.3e-2932.99Show/hide
Query:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE
        VT  Y  W+  R K I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + M+       +LE+ +   KN+ K E++ + LD+E
Subjt:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE

Query:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ
         RR+ K N +L+NE   L+    S++  IKDL  GKE  LE                           + +D+L + M  +SEE E  K+Y  SL  QL 
Subjt:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ

Query:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        AFQ +S++++ E   LK  Y  ++ DY +   D Q+++ +++QT+  ++++++RA  FAEWA DLR N   + S+A++L  FL  I ++LG
Subjt:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

XP_031738551.1 LOW QUALITY PROTEIN: uncharacterized protein LOC101203611 [Cucumis sativus]7.8e-3132.8Show/hide
Query:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE
        VT  Y  W+  R K +  T R+ V      ++++P+Q   +  +L  +N+ L+ ENEKLQ+E  + ++  T    +LE+ +   KN+ K E++ ++LDEE
Subjt:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE

Query:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ
         RR+ K N +L+NE   L+    SQ+  IKDL   KE  LE                           +T+D+L V M   SE+ +  K+Y+ SL  QL 
Subjt:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ

Query:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLGR--RTRIME
        AFQ +SE++  E   LK  Y  ++ DY + R D Q ++ +V+QT+  ++I++RRA GFAEWA DLR N   +  ++++L  FL  I R+LG   + +++ 
Subjt:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLGR--RTRIME

Query:  EKGEQEKTKRDIEE
        E  +     +D ++
Subjt:  EKGEQEKTKRDIEE

TrEMBL top hitse value%identityAlignment
A0A1S4DX26 girdin-like3.5e-2932.99Show/hide
Query:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE
        VT  Y  W+  R K I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + M+       +LE+ +   KN+ K E++ + LD+E
Subjt:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE

Query:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ
         RR+ K N +L+NE   L+    S++  IKDL  GKE  LE                           + +D+L + M  +SEE E  K+Y  SL  QL 
Subjt:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ

Query:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        AFQ +S++++ E   LK  Y  ++ DY +   D Q+++ +++QT+  ++++++RA  FAEWA DLR N   + S+A++L  FL  I ++LG
Subjt:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

A0A5A7T6E2 Girdin-like7.3e-2734.36Show/hide
Query:  DKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHALRNENAALRRATRSQENMIKDL
        ++PNQ   +  EL  +N+ L+ ENEKL++E  + M+  T    KLE+ +   KN+ K E+D + LD+E RR+ K N +L+NE    +    SQ+  IKDL
Subjt:  DKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHALRNENAALRRATRSQENMIKDL

Query:  SKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGDYAIMRE
          GKE  L+                           +T+D+L + M   SEE E  K+Y+ SL  QL A Q +S++++ E   L   Y  ++ DY +   
Subjt:  SKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGDYAIMRE

Query:  DMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        D Q+++ +V+QT+  ++++++RA  FAE A DLR N   M  +A++L  FL  I R+LG
Subjt:  DMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

A0A5D3D533 Girdin-like1.2e-2933.68Show/hide
Query:  VTPEYLQWRI-KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE
        VT EY  W+  +R+ I   +R+ V      + ++PNQ   +  +L  +N+ L+ ENEKL++E  + M+ +     +LE+ +   KN+ K E+D +  D+E
Subjt:  VTPEYLQWRI-KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE

Query:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ
         RR+ K N +L+NE   L+    S++  IKDL  GKE  LE                           +T+DNL + M  +SEE E  K+Y  SL  QL 
Subjt:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ

Query:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        A Q +S++++ E   L   Y  ++ DY +   D Q+++ +V+QT+  +++M++RA GFAEWA DLR     M  +A++L +FL  I R+LG
Subjt:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

A0A5D3DJ95 Girdin-like1.6e-2933.57Show/hide
Query:  KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHAL
        +R  I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + ++  T    +LE+ +   KN+ K E+D + LD+E RR+ K N  L
Subjt:  KRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRRLIKDNHAL

Query:  RNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSL
        +NE   L+    SQ+  IKDL  GKE  LE                           +T+D+L + M  +SEE E  K+Y  SL  QL A Q +S++++ 
Subjt:  RNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSL

Query:  ERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        E   L   Y  ++ DY +   D Q+++ +V+QT+  ++++++RA GFAEWA DLR N   +  +A++L  FL  I R+LG
Subjt:  ERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

A0A5D3DK34 Girdin-like3.5e-2932.99Show/hide
Query:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE
        VT  Y  W+  R K I   +R+ V      + ++PNQ   +  EL  +N+ L+ ENEKL++E  + M+       +LE+ +   KN+ K E++ + LD+E
Subjt:  VTPEYLQWRIKRSK-IPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEE

Query:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ
         RR+ K N +L+NE   L+    S++  IKDL  GKE  LE                           + +D+L + M  +SEE E  K+Y  SL  QL 
Subjt:  NRRLIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLE---------------------------RTLDNLRVNMQAQSEESEAFKSYSSSLERQLQ

Query:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG
        AFQ +S++++ E   LK  Y  ++ DY +   D Q+++ +++QT+  ++++++RA  FAEWA DLR N   + S+A++L  FL  I ++LG
Subjt:  AFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGKVNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATAGTCATTCTGAGGGAAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCTTCTAATAG
AGCAGCAGATAAGCCTAACCAGCTAGCGACAGAGCGGAAAGAGTTGGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGA
TGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGG
TTGATTAAGGATAATCATGCTCTGAGGAATGAAAATGCTGCATTACGAAGGGCAACTCGTTCACAAGAGAACATGATCAAAGACCTTTCAAAAGGCAAAGAGACTCTCTT
AGAGCGAACACTGGACAATCTACGCGTGAACATGCAGGCTCAATCAGAAGAGTCTGAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAA
GGGCAAGCGAACAATTGTCACTAGAGAGAGGACAACTAAAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAA
GTAAATCAAACCATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGA
GGAGTTGTTTGAGTTTTTAGGGAAGATTCGTAGAGACCTAGGGCGTAGAACAAGGATTATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATTGAGGAAATCA
GGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAAAATGATTGCAGATACGACTACACCAGACACTCCGATTGGAAACCCTCAAGCTGGCCTACCATTTCCA
CCCAGTTTCGCTTCACAT
mRNA sequenceShow/hide mRNA sequence
ATGGCAATAGTCATTCTGAGGGAAGTTACTCCAGAATATTTGCAATGGCGCATTAAGAGGAGCAAGATCCCAATTACGACTCGTGACAATGTGGGAGAATCTTCTAATAG
AGCAGCAGATAAGCCTAACCAGCTAGCGACAGAGCGGAAAGAGTTGGTGGGAAGAAATCAAACATTGAAGCTAGAAAATGAAAAGTTACAGCAAGAGGTCAAACGTTTGA
TGAACCAGGTAACTCAAGCTAGTGGCAAACTCGAAGAAGTAGAGAGAGTTTCAAAAAACCGAGCCAAGCGAGAAAGAGATTATGATATATTGGACGAGGAGAATAGAAGG
TTGATTAAGGATAATCATGCTCTGAGGAATGAAAATGCTGCATTACGAAGGGCAACTCGTTCACAAGAGAACATGATCAAAGACCTTTCAAAAGGCAAAGAGACTCTCTT
AGAGCGAACACTGGACAATCTACGCGTGAACATGCAGGCTCAATCAGAAGAGTCTGAAGCTTTTAAAAGTTATTCAAGCTCGTTGGAACGTCAGCTCCAAGCATTTCAAA
GGGCAAGCGAACAATTGTCACTAGAGAGAGGACAACTAAAGGAAAAATACTCCTCATTAAGGGGAGATTATGCCATTATGAGAGAAGACATGCAAATAATTCTTGGGAAA
GTAAATCAAACCATGAACACTATCAAGATCATGGCTAGGAGAGCCCGAGGATTTGCAGAATGGGCAAGGGATCTGCGAGAGAATACATCACCTATGGCCTCTAATGCGGA
GGAGTTGTTTGAGTTTTTAGGGAAGATTCGTAGAGACCTAGGGCGTAGAACAAGGATTATGGAAGAAAAGGGTGAACAAGAGAAGACTAAGCGGGACATTGAGGAAATCA
GGGAAAAGGTTGATGCAATCATTGCCGCTTTAGAAAAGGGCAAAATGATTGCAGATACGACTACACCAGACACTCCGATTGGAAACCCTCAAGCTGGCCTACCATTTCCA
CCCAGTTTCGCTTCACAT
Protein sequenceShow/hide protein sequence
MAIVILREVTPEYLQWRIKRSKIPITTRDNVGESSNRAADKPNQLATERKELVGRNQTLKLENEKLQQEVKRLMNQVTQASGKLEEVERVSKNRAKRERDYDILDEENRR
LIKDNHALRNENAALRRATRSQENMIKDLSKGKETLLERTLDNLRVNMQAQSEESEAFKSYSSSLERQLQAFQRASEQLSLERGQLKEKYSSLRGDYAIMREDMQIILGK
VNQTMNTIKIMARRARGFAEWARDLRENTSPMASNAEELFEFLGKIRRDLGRRTRIMEEKGEQEKTKRDIEEIREKVDAIIAALEKGKMIADTTTPDTPIGNPQAGLPFP
PSFASH