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Spg030297 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030297
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalpain-type cysteine protease DEK1
Genome locationscaffold10:21576579..21578656
RNA-Seq ExpressionSpg030297
SyntenySpg030297
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5D3CI74 Calpain-type cysteine protease DEK16.2e-0434.38Show/hide
Query:  FRSYPQHGRLVESAMLATLTHADQRIISYKQDFIVSSGLRTSY-LDVCRSLTDREATEISCLLSLLVNQSFHHGGRDTTFLTPEPYAGFSCASFFR
        F   P  G      +   L H       +  DF+V +G   S+     R+L+DRE + +  L+SLL + SF  G RD T  +P P  GF C SFF+
Subjt:  FRSYPQHGRLVESAMLATLTHADQRIISYKQDFIVSSGLRTSY-LDVCRSLTDREATEISCLLSLLVNQSFHHGGRDTTFLTPEPYAGFSCASFFR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGAGCGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTTTTCGATCTTATCCCCAACATGGTAGGCTTGTTGAGTCGGCGATGCTGGCCACTCTCACCCA
TGCAGATCAAAGGATAATCTCGTATAAACAGGATTTCATAGTTAGCTCAGGATTAAGAACGAGTTACCTAGACGTTTGTCGCTCCCTCACTGATCGAGAAGCGACAGAGA
TCTCTTGCCTTCTTTCCTTGTTGGTTAACCAGTCGTTTCACCATGGGGGTAGGGACACTACGTTCTTGACCCCTGAGCCTTATGCGGGCTTCTCTTGTGCCTCTTTTTTT
CGAATCAGGAGGAGCACCTTCATCACTTACTTTCGGATTGTCAGTTTTCCTGCTCCATATGGAGTCAGTTCTTCAGAGCTTTTGGGGTTGCTTTGGCTCGTAACATTGTT
TGTTCTTCTATTGTTGAGGAAGTTCTTTGGCATCCCCCTTTCCATGACAAAGGGAGAGTTCTTTGGCAGGCTTGCGTTTTTGCTATTTCTGGGGTATTTGGCTTGTGAGG
AATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGGAGCGAATTCCGTCTTGCGAAACTATGTCCCCAGCTATCTTTTCGATCTTATCCCCAACATGGTAGGCTTGTTGAGTCGGCGATGCTGGCCACTCTCACCCA
TGCAGATCAAAGGATAATCTCGTATAAACAGGATTTCATAGTTAGCTCAGGATTAAGAACGAGTTACCTAGACGTTTGTCGCTCCCTCACTGATCGAGAAGCGACAGAGA
TCTCTTGCCTTCTTTCCTTGTTGGTTAACCAGTCGTTTCACCATGGGGGTAGGGACACTACGTTCTTGACCCCTGAGCCTTATGCGGGCTTCTCTTGTGCCTCTTTTTTT
CGAATCAGGAGGAGCACCTTCATCACTTACTTTCGGATTGTCAGTTTTCCTGCTCCATATGGAGTCAGTTCTTCAGAGCTTTTGGGGTTGCTTTGGCTCGTAACATTGTT
TGTTCTTCTATTGTTGAGGAAGTTCTTTGGCATCCCCCTTTCCATGACAAAGGGAGAGTTCTTTGGCAGGCTTGCGTTTTTGCTATTTCTGGGGTATTTGGCTTGTGAGG
AATAG
Protein sequenceShow/hide protein sequence
MGRSEFRLAKLCPQLSFRSYPQHGRLVESAMLATLTHADQRIISYKQDFIVSSGLRTSYLDVCRSLTDREATEISCLLSLLVNQSFHHGGRDTTFLTPEPYAGFSCASFF
RIRRSTFITYFRIVSFPAPYGVSSSELLGLLWLVTLFVLLLLRKFFGIPLSMTKGEFFGRLAFLLFLGYLACEE