; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030316 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030316
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold6:24670424..24674056
RNA-Seq ExpressionSpg030316
SyntenySpg030316
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY13933.1 Uncharacterized protein TCM_032752 [Theobroma cacao]1.2e-1535.67Show/hide
Query:  EQPDEGPQLPYNRFVNNLARAKY-------PESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVRE
        E+  E P LPY   +N+L R +Y       P  V   VV +FYA + E       VRG  V +   AIN L    N  + EY +      ++  ++ +  
Subjt:  EQPDEGPQLPYNRFVNNLARAKY-------PESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVRE

Query:  VGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIA
        + IEGAQ + S  E  +F+ S +K+E   W+ F+  RLLP+TH S V+++R +L +AI+   SIDVGK+I+
Subjt:  VGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIA

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.5e-1327.78Show/hide
Query:  KYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREAN
        ++P +    +V +FYAN+ + +   V V+ V+V ++  AIN+++ L+     EY + A   ++EQL   + EV IEGA  ++S     T     LKR A 
Subjt:  KYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREAN

Query:  TWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII----------------------------ARVPENEGDVMLYDKGIIDTPTLARLQR
         W  F+  R +P+TH  TV+++RVLL ++IL  +S+++ +I                             A VP ++ + ++++ G I T +++R+ +
Subjt:  TWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII----------------------------ARVPENEGDVMLYDKGIIDTPTLARLQR

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.0e-1333.57Show/hide
Query:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREA
        AK+P  VNA +V +FY+NI E +   V+VRG+ + ++P AIN  + LQ          A    +E     + ++ + G +    + +++T     L    
Subjt:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREA

Query:  NTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII
          W  F+K +L+PT+H++TVS +R+LL  +IL   +ID+GKII
Subjt:  NTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII

PIN20995.1 hypothetical protein CDL12_06316 [Handroanthus impetiginosus]2.0e-1333.53Show/hide
Query:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNL--QNFPHAEYNEMAVAPSN-EQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLK
        AK P++    VV++FYAN+   DG   ++RG +V +S   IN  + +  Q     E+NE   A +  + + + + +  +E +  R     +++F+SS L 
Subjt:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNL--QNFPHAEYNEMAVAPSN-EQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLK

Query:  REANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIARVPENEGDVMLYDKGIIDTP
        RE+  W+RFI  R+LPT+H S VS+ER +L +AI   + ID+G +I  V +       +D G  D P
Subjt:  REANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIARVPENEGDVMLYDKGIIDTP

XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]3.3e-1633.88Show/hide
Query:  AEDQEVVQKVVEDTEEVREGNTEEVKE---------KQSEDVQEE--QAEVAPEGGNEQEARVEVIMSEVPKRRRIKRKAGHVKEKKEAEEKAREEAE--
        AE+  V + VV + E  R+  T E  E         K S  V EE   AEVA E   E E ++EV+  +  K++  +RKAG   E+ E EEK  EE E  
Subjt:  AEDQEVVQKVVEDTEEVREGNTEEVKE---------KQSEDVQEE--QAEVAPEGGNEQEARVEVIMSEVPKRRRIKRKAGHVKEKKEAEEKAREEAE--

Query:  KKAEEEQLLKQRAE-------------RGKSVAEASEQPDEGPQLPYNRFVNNLARAK------YPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSP
        KK EEE+ LK+  E             +GK +AE  ++     +    R    LA AK         S  A VV DFY          V ++   V +S 
Subjt:  KKAEEEQLLKQRAE-------------RGKSVAEASEQPDEGPQLPYNRFVNNLARAK------YPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSP

Query:  GAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSID
          IN +Y +++ P+A  N++   P+ +Q+ DA++ +   G +  +S     T  S  L  E   W+  +K+RL+ TTHD TVSR+RV+  + I+RS+ ID
Subjt:  GAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSID

Query:  VGKIIAR
        VG++IAR
Subjt:  VGKIIAR

TrEMBL top hitse value%identityAlignment
A0A061FAJ6 Uncharacterized protein6.0e-1635.67Show/hide
Query:  EQPDEGPQLPYNRFVNNLARAKY-------PESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVRE
        E+  E P LPY   +N+L R +Y       P  V   VV +FYA + E       VRG  V +   AIN L    N  + EY +      ++  ++ +  
Subjt:  EQPDEGPQLPYNRFVNNLARAKY-------PESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVRE

Query:  VGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIA
        + IEGAQ + S  E  +F+ S +K+E   W+ F+  RLLP+TH S V+++R +L +AI+   SIDVGK+I+
Subjt:  VGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIA

A0A2G9HTZ4 Uncharacterized protein9.6e-1433.53Show/hide
Query:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNL--QNFPHAEYNEMAVAPSN-EQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLK
        AK P++    VV++FYAN+   DG   ++RG +V +S   IN  + +  Q     E+NE   A +  + + + + +  +E +  R     +++F+SS L 
Subjt:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNL--QNFPHAEYNEMAVAPSN-EQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLK

Query:  REANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIARVPENEGDVMLYDKGIIDTP
        RE+  W+RFI  R+LPT+H S VS+ER +L +AI   + ID+G +I  V +       +D G  D P
Subjt:  REANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIARVPENEGDVMLYDKGIIDTP

A0A2P5DAQ2 Uncharacterized protein9.6e-1437.06Show/hide
Query:  YPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREANT
        +PE     +V +FY N+   D   V +RGV+V  S  AIN +++L + P  E++E     +  +L   +  V I GA+  +S     T   S L   A  
Subjt:  YPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREANT

Query:  WMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAR
        W  F+K RLLPTTH  TVS+E V L +++L   SI+VG++I R
Subjt:  WMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIAR

A0A6A2ZUE4 Uncharacterized protein9.6e-1433.57Show/hide
Query:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREA
        AK+P  VNA +V +FY+NI E +   V+VRG+ + ++P AIN  + LQ          A    +E     + ++ + G +    + +++T     L    
Subjt:  AKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREA

Query:  NTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII
          W  F+K +L+PT+H++TVS +R+LL  +IL   +ID+GKII
Subjt:  NTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII

W9QTD9 Uncharacterized protein7.3e-1427.78Show/hide
Query:  KYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREAN
        ++P +    +V +FYAN+ + +   V V+ V+V ++  AIN+++ L+     EY + A   ++EQL   + EV IEGA  ++S     T     LKR A 
Subjt:  KYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALYNLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREAN

Query:  TWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII----------------------------ARVPENEGDVMLYDKGIIDTPTLARLQR
         W  F+  R +P+TH  TV+++RVLL ++IL  +S+++ +I                             A VP ++ + ++++ G I T +++R+ +
Subjt:  TWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII----------------------------ARVPENEGDVMLYDKGIIDTPTLARLQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTTTTTCCTGAAGCTCTATTTATTCACGAGCCTTCGGTACCTGTTACCCCTGAGGTACAGAAAGTGAAAGCGAAGAAAAAGAGAACGCTGGAGGAAAAGGAAGC
CAAAAGAAGGAGAAGGCAACAACGGGCTGAGGATCAAGAAGTTGTACAAAAGGTTGTTGAAGATACAGAGGAAGTGCGAGAAGGGAATACAGAGGAGGTAAAAGAAAAGC
AGTCTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAGGAGGTAATGAGCAGGAGGCTCGAGTGGAGGTGATAATGTCGGAAGTACCGAAACGTCGCCGCATT
AAGCGAAAAGCGGGCCACGTCAAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGAAGCAGAGAAGAAGGCTGAAGAGGAACAGTTGCTCAAGCAAAGGGCAGAAAG
GGGCAAGAGTGTTGCTGAAGCATCGGAGCAACCTGACGAAGGGCCACAGTTGCCGTATAACCGCTTCGTCAACAATCTTGCAAGAGCAAAATATCCTGAATCTGTGAACG
CGCAGGTGGTGCACGATTTCTATGCAAATATTGACGAAGAAGATGGTTTCCGAGTGATCGTTCGAGGTGTAGAGGTCGACTGGAGTCCTGGTGCTATTAATGCATTATAT
AACCTTCAAAATTTCCCCCACGCAGAATACAATGAGATGGCTGTGGCGCCATCTAATGAGCAGCTGAGCGATGCTGTGCGGGAAGTTGGTATTGAAGGGGCGCAGTGTAG
GCTTTCAAAAACTGAGAAGAGGACATTCCAGTCATCCTATCTGAAGAGGGAAGCAAATACATGGATGAGATTTATCAAACAGAGGTTGCTTCCAACAACTCACGACTCGA
CGGTTTCTAGGGAACGGGTTCTGTTGGCTTTCGCGATCTTAAGGTCTCTTAGTATTGATGTAGGGAAGATAATTGCTAGGGTTCCGGAGAATGAAGGAGATGTCATGTTA
TATGACAAGGGGATCATCGATACGCCTACCTTGGCACGGCTTCAGCGTACGCAAGAGGCACATCAGGGTGGGCTTGTTTACAGCATCAACACGATGTTAGAACAACTTGC
ACTGTCGGCCAGCAGGCAAGAGTTTGCCGAGACGCAGGCTTTAACTTTCTGGACTATCTTGGACTGGTTAAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTT
TTGCTTCAGCATTTCTTCTAGCCTGGTCATTGCTGCGGCGAGAAGATTTTAAGGTAAAGGTTGAAGAATATATTGCTGAGCGTATGGAGGGAGCAAAATCTGTGCTGGAG
CAAAGCGAGGAGCAAAACTGCCACGTCACAACTCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCTTTTTCCTGAAGCTCTATTTATTCACGAGCCTTCGGTACCTGTTACCCCTGAGGTACAGAAAGTGAAAGCGAAGAAAAAGAGAACGCTGGAGGAAAAGGAAGC
CAAAAGAAGGAGAAGGCAACAACGGGCTGAGGATCAAGAAGTTGTACAAAAGGTTGTTGAAGATACAGAGGAAGTGCGAGAAGGGAATACAGAGGAGGTAAAAGAAAAGC
AGTCTGAGGATGTGCAAGAAGAACAGGCAGAGGTTGCACCTGAAGGAGGTAATGAGCAGGAGGCTCGAGTGGAGGTGATAATGTCGGAAGTACCGAAACGTCGCCGCATT
AAGCGAAAAGCGGGCCACGTCAAGGAGAAGAAAGAGGCCGAGGAAAAAGCAAGAGAGGAAGCAGAGAAGAAGGCTGAAGAGGAACAGTTGCTCAAGCAAAGGGCAGAAAG
GGGCAAGAGTGTTGCTGAAGCATCGGAGCAACCTGACGAAGGGCCACAGTTGCCGTATAACCGCTTCGTCAACAATCTTGCAAGAGCAAAATATCCTGAATCTGTGAACG
CGCAGGTGGTGCACGATTTCTATGCAAATATTGACGAAGAAGATGGTTTCCGAGTGATCGTTCGAGGTGTAGAGGTCGACTGGAGTCCTGGTGCTATTAATGCATTATAT
AACCTTCAAAATTTCCCCCACGCAGAATACAATGAGATGGCTGTGGCGCCATCTAATGAGCAGCTGAGCGATGCTGTGCGGGAAGTTGGTATTGAAGGGGCGCAGTGTAG
GCTTTCAAAAACTGAGAAGAGGACATTCCAGTCATCCTATCTGAAGAGGGAAGCAAATACATGGATGAGATTTATCAAACAGAGGTTGCTTCCAACAACTCACGACTCGA
CGGTTTCTAGGGAACGGGTTCTGTTGGCTTTCGCGATCTTAAGGTCTCTTAGTATTGATGTAGGGAAGATAATTGCTAGGGTTCCGGAGAATGAAGGAGATGTCATGTTA
TATGACAAGGGGATCATCGATACGCCTACCTTGGCACGGCTTCAGCGTACGCAAGAGGCACATCAGGGTGGGCTTGTTTACAGCATCAACACGATGTTAGAACAACTTGC
ACTGTCGGCCAGCAGGCAAGAGTTTGCCGAGACGCAGGCTTTAACTTTCTGGACTATCTTGGACTGGTTAAGCTTAATTAGATCAAGGTATTCTGATCTCCAGAAACCTT
TTGCTTCAGCATTTCTTCTAGCCTGGTCATTGCTGCGGCGAGAAGATTTTAAGGTAAAGGTTGAAGAATATATTGCTGAGCGTATGGAGGGAGCAAAATCTGTGCTGGAG
CAAAGCGAGGAGCAAAACTGCCACGTCACAACTCGTTAG
Protein sequenceShow/hide protein sequence
MILFPEALFIHEPSVPVTPEVQKVKAKKKRTLEEKEAKRRRRQQRAEDQEVVQKVVEDTEEVREGNTEEVKEKQSEDVQEEQAEVAPEGGNEQEARVEVIMSEVPKRRRI
KRKAGHVKEKKEAEEKAREEAEKKAEEEQLLKQRAERGKSVAEASEQPDEGPQLPYNRFVNNLARAKYPESVNAQVVHDFYANIDEEDGFRVIVRGVEVDWSPGAINALY
NLQNFPHAEYNEMAVAPSNEQLSDAVREVGIEGAQCRLSKTEKRTFQSSYLKREANTWMRFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIARVPENEGDVML
YDKGIIDTPTLARLQRTQEAHQGGLVYSINTMLEQLALSASRQEFAETQALTFWTILDWLSLIRSRYSDLQKPFASAFLLAWSLLRREDFKVKVEEYIAERMEGAKSVLE
QSEEQNCHVTTR