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Spg030322 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030322
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold6:25351366..25353269
RNA-Seq ExpressionSpg030322
SyntenySpg030322
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030495102.1 uncharacterized protein LOC115710889 [Cannabis sativa]1.6e-2752.44Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVE
        +YM KNDAV+QSQAASLRNLEVQ+GQLA++ KNRP GTLPS+ E P+  GKE C A+TLR G+ L +N  A + +E +  + + + + K+K  + ++   
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVE

Query:  P-EKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
        P E Q       E    K P PFPQR +KK D+ QF++FL VL +LHINIPLVEALE+MP+Y K
Subjt:  P-EKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

XP_030497803.1 uncharacterized protein LOC115713460 [Cannabis sativa]1.1e-2852.44Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGN-VEVTPV
        +YM KND V+QSQAASLRNLEVQ+GQLA++ KNRP GTLPS+ E P+  GKE C A+TLR G+ + +N  A   +E +    E + + K   + VE+ PV
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGN-VEVTPV

Query:  EPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
             +    EK     KPP PFPQR +K+ D+ QF++FL VL +LHINIPLVEALE+MP+Y K
Subjt:  EPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]3.7e-2951.53Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVE
        +YM KNDAV+QSQAASLRNLEVQ+GQLA++ KNRP GTLPS+ E P+  GKE C A+TLR G+ + +N  A   +E +    E + + K   +    P E
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVE

Query:  PEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
         ++  +    ++P   KPP+PFPQR +K+ D+ QF++FL VL +LHINIPLVEALE+MP+Y K
Subjt:  PEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]1.9e-2851.83Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVT-PV
        +YM KNDAV+QSQAASLRNLEVQ+GQLA++ KNRP GTLPS+ + P+  GKE C A+TLR G+ + +N  A   +E +    E + +  Q  +V +  P 
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVT-PV

Query:  EPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
          E      +EK     KPP+PFPQR +K+ D+ QF++FL VL +LHINIPLVEALE+MP+Y K
Subjt:  EPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]3.0e-2650.6Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAP-EPDPQPKQKGNVEVTPV
        +YM KNDAV+QSQAASLRNLE+Q+G LA+E K RP G+LPS+ E P+  GKEQC ++ LR G+ L   N     + S EP   + D +  +K   E+   
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAP-EPDPQPKQKGNVEVTPV

Query:  EP----EKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
         P      Q+   ++  P   KPP+PFPQR RK+  + QFKKFL VL +LHINIPLVEALE+MP+Y K
Subjt:  EP----EKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

TrEMBL top hitse value%identityAlignment
A0A2P5B4G5 Uncharacterized protein (Fragment)3.6e-2244.97Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLA-SEKNRPVGTLPSNIEAPKGKEQCHALTLRCGRQLSTNNPA---PAQEESNEPAPEPDPQPKQKGNV-EVTP
        +YM KNDA++Q+QAASLRNLE Q+G+LA +  +RP G LPSN E    KEQC+ +TLR  +Q+   N +        ++ P+     QP Q   + E   
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLA-SEKNRPVGTLPSNIEAPKGKEQCHALTLRCGRQLSTNNPA---PAQEESNEPAPEPDPQPKQKGNV-EVTP

Query:  VEPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAKKIQQ
        VEPEK K K     P+ Y PP+PFPQR  K N + QF KFL V  +LHINI   E L + P+Y K +++
Subjt:  VEPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAKKIQQ

A0A6J0ZX64 LOW QUALITY PROTEIN: uncharacterized protein LOC1104129451.9e-2347.56Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLA-SEKNRPVGTLPSNIEA-PKGKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVEP
        +Y+ K DA++QSQ ASLRNLE QVGQLA S  NRP G+LPS+ +  PKGKEQC A+TLR G+++         E  N+ A E + +   K  +    +E 
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLA-SEKNRPVGTLPSNIEA-PKGKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVEP

Query:  EKQKEKQKEKE--PDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
        +++ + + E +       PP PFPQRL+K+  E QF+KFL V  +LHINIP  EALE+MPSY K
Subjt:  EKQKEKQKEKE--PDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

A0A6J1BDW4 uncharacterized protein LOC1104265841.1e-2346.47Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLA-SEKNRPVGTLPSNIEA-PKGKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVEP
        +Y+ K DA++QSQ ASLRNLE QVGQLA S  NRP G+LPS+ +  PKGKEQC A+TLR G+++   N    + E        D +   +  +E+   + 
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLA-SEKNRPVGTLPSNIEA-PKGKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVEP

Query:  EKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK--KIQQPK
        +K + K   +      PP PFPQRL+K+  E QF+KFL V  +LHINIP  EALE+MP Y K  K   PK
Subjt:  EKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK--KIQQPK

A0A6J1GJ68 uncharacterized protein LOC1114543442.7e-2545.98Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVE
        EYM KND V+QSQ ASL+NLEVQVGQLA+E +NRP+G LP++ E PK  GKEQC A+ LR G+++ +     A++  +      D Q  Q+ +      E
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVE

Query:  PEKQKEKQKE-----------KEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
          K   K KE           +E   Y P  PFPQR+++K +EA F+KF+ +L E+HINIP VEAL++MP+Y K
Subjt:  PEKQKEKQKE-----------KEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

A0A6J1H7K8 uncharacterized protein LOC1114611671.7e-2444.32Show/hide
Query:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLST----------------------NNPAPAQEESN
        EYM KND V+QSQ ASLRNLEVQVGQLA+E +NRP+G LPS+ E PK  G EQC A+ LR G+++S+                         A  QEE N
Subjt:  EYMEKNDAVVQSQAASLRNLEVQVGQLASE-KNRPVGTLPSNIEAPK--GKEQCHALTLRCGRQLST----------------------NNPAPAQEESN

Query:  EPAPEPDPQPKQKGNVEVTPVEPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK
        +   E   Q +   N       P+ Q      +E   Y P  PFPQR+++K +EA F+KF+ +  E+HINIPLVEAL++M +Y K
Subjt:  EPAPEPDPQPKQKGNVEVTPVEPEKQKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAGAATTCATGGCAAGTCAGAATGAATATATGGAAAAAAATGATGCAGTAGTCCAAAGTCAAGCCGCATCATTGAGAAATTTGGAAGTCCAAGTGGGACAGCT
TGCGTCAGAAAAAAATAGACCTGTTGGGACATTACCGAGCAACATAGAAGCTCCAAAAGGAAAGGAACAGTGTCACGCATTGACTCTCCGCTGTGGAAGACAACTCTCAA
CTAACAACCCTGCACCAGCGCAGGAAGAATCAAACGAACCTGCACCTGAACCTGACCCTCAACCTAAACAGAAAGGTAACGTAGAGGTGACTCCAGTAGAGCCTGAAAAG
CAGAAAGAAAAGCAAAAGGAAAAAGAACCTGACGCATATAAACCTCCGATACCCTTTCCGCAAAGGTTAAGAAAGAAGAACGATGAAGCACAATTTAAGAAGTTTCTTTG
TGTATTGCCAGAACTTCACATCAACATTCCTTTAGTTGAAGCATTGGAGAAAATGCCCAGTTATGCGAAAAAAATACAGCAGCCCAAGAGATCTTTCTTTGTTGCAAATC
TCACACGAACACCACCACGAGGATTCACCAGTAATCTCACGGGATTATGTGAAGAGGAGGATGGTGGAAGCCTAAGAATTTCTTGGGAGAAATTCTCTTCTGTATTCAGA
GAATTGCAGAGAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAGAATTCATGGCAAGTCAGAATGAATATATGGAAAAAAATGATGCAGTAGTCCAAAGTCAAGCCGCATCATTGAGAAATTTGGAAGTCCAAGTGGGACAGCT
TGCGTCAGAAAAAAATAGACCTGTTGGGACATTACCGAGCAACATAGAAGCTCCAAAAGGAAAGGAACAGTGTCACGCATTGACTCTCCGCTGTGGAAGACAACTCTCAA
CTAACAACCCTGCACCAGCGCAGGAAGAATCAAACGAACCTGCACCTGAACCTGACCCTCAACCTAAACAGAAAGGTAACGTAGAGGTGACTCCAGTAGAGCCTGAAAAG
CAGAAAGAAAAGCAAAAGGAAAAAGAACCTGACGCATATAAACCTCCGATACCCTTTCCGCAAAGGTTAAGAAAGAAGAACGATGAAGCACAATTTAAGAAGTTTCTTTG
TGTATTGCCAGAACTTCACATCAACATTCCTTTAGTTGAAGCATTGGAGAAAATGCCCAGTTATGCGAAAAAAATACAGCAGCCCAAGAGATCTTTCTTTGTTGCAAATC
TCACACGAACACCACCACGAGGATTCACCAGTAATCTCACGGGATTATGTGAAGAGGAGGATGGTGGAAGCCTAAGAATTTCTTGGGAGAAATTCTCTTCTGTATTCAGA
GAATTGCAGAGAGAATGA
Protein sequenceShow/hide protein sequence
MMKEFMASQNEYMEKNDAVVQSQAASLRNLEVQVGQLASEKNRPVGTLPSNIEAPKGKEQCHALTLRCGRQLSTNNPAPAQEESNEPAPEPDPQPKQKGNVEVTPVEPEK
QKEKQKEKEPDAYKPPIPFPQRLRKKNDEAQFKKFLCVLPELHINIPLVEALEKMPSYAKKIQQPKRSFFVANLTRTPPRGFTSNLTGLCEEEDGGSLRISWEKFSSVFR
ELQRE