; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030331 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030331
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationscaffold6:26507118..26509684
RNA-Seq ExpressionSpg030331
SyntenySpg030331
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0030245 - cellulose catabolic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008810 - cellulase activity (molecular function)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149348.1 small ubiquitin-related modifier 1 [Cucumis sativus]1.6e-4697.98Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG I
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI

XP_018812104.1 small ubiquitin-related modifier 1 [Juglans regia]5.7e-4496.84Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

XP_022158763.1 small ubiquitin-related modifier 1-like [Momordica charantia]2.1e-4697.98Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG I
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI

XP_023895256.1 small ubiquitin-related modifier 1 [Quercus suber]1.3e-4395.79Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD++SIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

XP_038905908.1 small ubiquitin-related modifier 1 [Benincasa hispida]2.1e-4696.97Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG +
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI

TrEMBL top hitse value%identityAlignment
A0A0A0L2Y3 Small ubiquitin-related modifier7.7e-4797.98Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG I
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI

A0A1S3BKS1 Small ubiquitin-related modifier7.7e-4797.98Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG I
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI

A0A2I4DY72 Small ubiquitin-related modifier2.7e-4496.84Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

A0A6A1VQH5 Small ubiquitin-related modifier2.7e-4496.84Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

A0A6J1DX09 Small ubiquitin-related modifier1.0e-4697.98Show/hide
Query:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI
        MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSV+LNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG I
Subjt:  MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEI

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt32.0e-2357.45Show/hide
Query:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +G T+Q++ K  T+   HINLKV GQD NEVFF+IKK+T+  KLM  YC RQ   +NS+ FL DG R+R +QTP EL+MEDGD+I+A+L Q GG
Subjt:  SGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

P55852 Small ubiquitin-related modifier 11.9e-4291.3Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG

P55857 Small ubiquitin-related modifier 16.3e-3886.81Show/hide
Query:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        EEDKKP       AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+N+IAFLFDGRRLR EQTP+ELEMEDGDEIDAMLHQTGG
Subjt:  EEDKKPT---DQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

Q9FLP5 Small ubiquitin-related modifier 35.9e-2055.06Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ KKS  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

Q9FLP6 Small ubiquitin-related modifier 23.6e-4192.31Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGE
        EEDKKP DQ AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG +
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGE

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 11.3e-4391.3Show/hide
Query:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG
        NQEEDKKP D  AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD+NSIAFLFDGRRLRAEQTP+EL+MEDGDEIDAMLHQTGG G
Subjt:  NQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGG

AT5G55160.1 small ubiquitin-like modifier 22.5e-4292.31Show/hide
Query:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGE
        EEDKKP DQ AHINLKVKGQDGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTGGG +
Subjt:  EEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGE

AT5G55160.2 small ubiquitin-like modifier 21.5e-3980.77Show/hide
Query:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG
        EEDKKP DQ AHINLKVKGQ             DGNEVFFRIK+STQLKKLMNAYCDRQSVD NSIAFLFDGRRLRAEQTP+ELEMEDGDEIDAMLHQTG
Subjt:  EEDKKPTDQSAHINLKVKGQ-------------DGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTG

Query:  GGGE
        GG +
Subjt:  GGGE

AT5G55170.1 small ubiquitin-like modifier 34.2e-2155.06Show/hide
Query:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        +D KP D  Q AH+ LKVK QDG+EV F+ KKS  LKKLM  YCDR+ + L++ AF+F+G R+   +TP+EL+MEDGD IDA    +GG
Subjt:  EDKKPTD--QSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG

AT5G55856.1 Ubiquitin-like superfamily protein1.0e-1951.16Show/hide
Query:  DKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG
        DKKP   S+HI +KVK QD   V+FRIK+  +L+K+M+AY D+  V+++++ FLFDG R++  QTP EL +ED DEI+A   Q GG
Subjt:  DKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGGCGTCACCAACCAAGAGGAGGACAAGAAGCCTACCGATCAGTCCGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAA
AAAGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGAGCAGAGCAGA
CTCCAGAAGAGCTGGAAATGGAGGATGGAGATGAGATCGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGAAATAACAGTACTTGTGAAGGAGCTGTACTCAAAGGAA
TACACGGTTTCACCAAGGAGGCTTAATTCTGCAGCTGTACTCAAAGCTTGGGAAGCTAAGTGTATCATTCAGGAGCCATTAAGGTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGGCGTCACCAACCAAGAGGAGGACAAGAAGCCTACCGATCAGTCCGCTCATATCAACCTCAAAGTCAAGGGCCAGGATGGGAATGAAGTTTTCTTCCGGATCAA
AAAGAGTACCCAACTGAAGAAGCTAATGAATGCTTACTGTGACAGGCAGTCGGTTGATTTGAACTCCATTGCATTCTTGTTTGACGGCCGCCGACTGCGAGCAGAGCAGA
CTCCAGAAGAGCTGGAAATGGAGGATGGAGATGAGATCGATGCAATGCTTCATCAGACTGGAGGTGGAGGTGAAATAACAGTACTTGTGAAGGAGCTGTACTCAAAGGAA
TACACGGTTTCACCAAGGAGGCTTAATTCTGCAGCTGTACTCAAAGCTTGGGAAGCTAAGTGTATCATTCAGGAGCCATTAAGGTGTTAA
Protein sequenceShow/hide protein sequence
MSGVTNQEEDKKPTDQSAHINLKVKGQDGNEVFFRIKKSTQLKKLMNAYCDRQSVDLNSIAFLFDGRRLRAEQTPEELEMEDGDEIDAMLHQTGGGGEITVLVKELYSKE
YTVSPRRLNSAAVLKAWEAKCIIQEPLRC