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Spg030333 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030333
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationscaffold6:24730249..24734265
RNA-Seq ExpressionSpg030333
SyntenySpg030333
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030494694.1 uncharacterized protein LOC115710474 [Cannabis sativa]1.2e-1568.12Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLE
        +M++YM + DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+CKE  KAVTLRSGK +E
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLE

XP_030494874.1 uncharacterized protein LOC115710657 [Cannabis sativa]9.3e-1653.92Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQDVGKNSDENVVVEKEL--ETGQ
        +M++YMA+ DA IQS  AS+R LELQ+G LANELKARPQG LPSDTE+PRR+ KEQ  A+ LRSGK L+  +E  K    G     ++ ++K+L  +T Q
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQDVGKNSDENVVVEKEL--ETGQ

Query:  AF
         F
Subjt:  AF

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]3.5e-1560.23Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEER------KEPSKPQDVGK
        +M++YMA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+ KE  KAVTLRSGK +E        KEPS  Q  G+
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEER------KEPSKPQDVGK

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]3.5e-1553.77Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEER------KEPSKPQDVG----KNSDENVVV
        +M++YMA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+ KE  KAVTLRSGK +E        KEPS  Q  G    K +  N  +
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEER------KEPSKPQDVG----KNSDENVVV

Query:  EKELET
         +E+ T
Subjt:  EKELET

XP_030510138.1 uncharacterized protein LOC115724905 [Cannabis sativa]9.3e-1657.89Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEER-------KEP--SKPQDVGKNSDE
        +M++YMA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+CKE  KAVTLRSGK +E         KEP  SK  ++ KN  +
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEER-------KEP--SKPQDVGKNSDE

TrEMBL top hitse value%identityAlignment
A0A6J1DW02 uncharacterized protein LOC1110248971.2e-1373.85Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSG
        MMKEYMARTDA IQS  ASMR    Q+G LANELK RPQG  P  TE PRRE KEQ KAVTLRSG
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSG

A0A6J1DWK1 uncharacterized protein LOC1110250534.6e-1342.31Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQDVGKNSDENVVVEKELETGQAF
        +MK+YMA  DA +QS  AS+R LELQVGQLA +LK+RP G LPSDTE P+R+ KEQ  A+TLRSGK L     P+ P       +   +V+ E ++ Q  
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQDVGKNSDENVVVEKELETGQAF

Query:  LLAWSDAAAKKILEVKVEECIAERLEGANS
                A+ ++ +  E+   +  EG N+
Subjt:  LLAWSDAAAKKILEVKVEECIAERLEGANS

A0A6J1DYG0 uncharacterized protein LOC1110257641.4e-1468Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPS
        MMKEYMARTDA IQS  ASMR  E Q+GQLANELK RPQG  P  TE P+RE KEQ KAVTLRSG   +E   P+
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPS

A0A6J1GJ68 uncharacterized protein LOC1114543442.3e-1250Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQ---------DVGKNSDENVVVE
        ++KEYMA+ D  IQS QAS++ LE+QVGQLA EL+ RP GKLP+DTE P+RE KEQ +A+ LRSGK +    E +  Q         D  + +DE   V+
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQ---------DVGKNSDENVVVE

Query:  KE
        KE
Subjt:  KE

A0A6J1H7K8 uncharacterized protein LOC1114611671.9e-1451.49Show/hide
Query:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQDVGKNSD--------ENVVVEK
        ++KEYMA+ D  IQS QAS+R LE+QVGQLANEL+ RP GKLPSDTE P+RE  EQ +A+ LRSGK +  R+E  K     ++ +        E  VV++
Subjt:  MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQDVGKNSD--------ENVVVEK

Query:  E
        E
Subjt:  E

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAGAGTATATGGCTCGTACAGATGCCGCAATTCAAAGTAATCAAGCTTCAATGAGAGCCCTGGAATTGCAAGTGGGTCAGCTAGCTAATGAGCTGAAGGCAAG
GCCTCAAGGGAAACTTCCTTCAGATACTGAACACCCTAGAAGGGAATGTAAGGAGCAGGTAAAGGCAGTAACTCTTAGGAGTGGTAAGCCACTAGAGGAAAGAAAAGAGC
CTAGTAAACCTCAGGATGTAGGAAAGAATAGTGATGAAAATGTTGTTGTTGAGAAAGAGTTGGAGACTGGTCAGGCCTTTCTTCTAGCCTGGTCTGATGCTGCGGCAAAG
AAGATTCTGGAGGTAAAGGTTGAAGAATGTATTGCTGAGCGACTGGAGGGAGCAAATTCTGTGCTGGAGCAAAGCGAGGAGCAAAACTGCCACGTCACAGCTCTTATGGA
CATGCTTACTCAGATTGTACCTCAAGAAGTGCAAGAAGAAGAATTCCAAGCTCCACCAGCTCAAGAAGAAGAACTTCAAGCTCCACCAGCTCAATCAAGCTCGAATGAAG
CTCCATGGGTGTCAACTTCAATTCAACCCAATCATGAGGCAATCATTATGCCACAAGCTCCAATGACAAGAGCTAGAGCTAAAAGACTACAAGAGGCATTAAATGGGTAT
TTCCAAGCTAAGTGCTTGATCGGTAGTACTTCATTGGGGTTGAAACACATTCCAAAAGATCCAGAGTTCTGGGAGGAATCTGCTAATAAGACTGCGAGAGTTTTGCATGA
TCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAGAGTATATGGCTCGTACAGATGCCGCAATTCAAAGTAATCAAGCTTCAATGAGAGCCCTGGAATTGCAAGTGGGTCAGCTAGCTAATGAGCTGAAGGCAAG
GCCTCAAGGGAAACTTCCTTCAGATACTGAACACCCTAGAAGGGAATGTAAGGAGCAGGTAAAGGCAGTAACTCTTAGGAGTGGTAAGCCACTAGAGGAAAGAAAAGAGC
CTAGTAAACCTCAGGATGTAGGAAAGAATAGTGATGAAAATGTTGTTGTTGAGAAAGAGTTGGAGACTGGTCAGGCCTTTCTTCTAGCCTGGTCTGATGCTGCGGCAAAG
AAGATTCTGGAGGTAAAGGTTGAAGAATGTATTGCTGAGCGACTGGAGGGAGCAAATTCTGTGCTGGAGCAAAGCGAGGAGCAAAACTGCCACGTCACAGCTCTTATGGA
CATGCTTACTCAGATTGTACCTCAAGAAGTGCAAGAAGAAGAATTCCAAGCTCCACCAGCTCAAGAAGAAGAACTTCAAGCTCCACCAGCTCAATCAAGCTCGAATGAAG
CTCCATGGGTGTCAACTTCAATTCAACCCAATCATGAGGCAATCATTATGCCACAAGCTCCAATGACAAGAGCTAGAGCTAAAAGACTACAAGAGGCATTAAATGGGTAT
TTCCAAGCTAAGTGCTTGATCGGTAGTACTTCATTGGGGTTGAAACACATTCCAAAAGATCCAGAGTTCTGGGAGGAATCTGCTAATAAGACTGCGAGAGTTTTGCATGA
TCAATAA
Protein sequenceShow/hide protein sequence
MMKEYMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRRECKEQVKAVTLRSGKPLEERKEPSKPQDVGKNSDENVVVEKELETGQAFLLAWSDAAAK
KILEVKVEECIAERLEGANSVLEQSEEQNCHVTALMDMLTQIVPQEVQEEEFQAPPAQEEELQAPPAQSSSNEAPWVSTSIQPNHEAIIMPQAPMTRARAKRLQEALNGY
FQAKCLIGSTSLGLKHIPKDPEFWEESANKTARVLHDQ