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Spg030349 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030349
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:26294188..26297506
RNA-Seq ExpressionSpg030349
SyntenySpg030349
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025361.1 uncharacterized protein E6C27_scaffold1204G00450 [Cucumis melo var. makuwa]2.4e-2266.04Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL
        MTEILS RLYGTVCTQ                 VEIELPV DTL   AE      SYF NQVMSGLH V    FNVSVGST IVRGDDVCWLHAVFRAK 
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL

Query:  AGGPGG
        AGGPGG
Subjt:  AGGPGG

KAA0062407.1 uncharacterized protein E6C27_scaffold154G002090 [Cucumis melo var. makuwa]2.6e-2466.35Show/hide
Query:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAES----------------------YFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLA
        MTEILS RLYGTVCTQV+IELP+PDTLPTSAES                      YF NQVMSGLH V    FNVSVGSTGIVRGDDVCWLHAVFR K A
Subjt:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAES----------------------YFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLA

Query:  GGPG
          PG
Subjt:  GGPG

KAA0064296.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.2e-1878.08Show/hide
Query:  VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGG
        VEIEL VPDTLPTSAE      SYF NQVMSGLH V    FNVSVGSTGIVRGDDVC LH VFRAK AGGPGG
Subjt:  VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGG

TYK01041.1 uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa]1.7e-2362.61Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL
        MTEILS RL+GTVCTQ                 VEIELPVPDTLPTS E      SYF NQVMSGLH V    FN+SV STGIVRGDDVCWLHAVFRAK 
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL

Query:  AGGP-GGVRNRKEER
         GGP GGV   +  R
Subjt:  AGGP-GGVRNRKEER

TYK05030.1 uncharacterized protein E5676_scaffold143G002850 [Cucumis melo var. makuwa]3.3e-1957.41Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESYFPNQ--------VMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRA
        MTEILS +LY TVCT                  VEIELPVPDTLPTSAES+  NQ        ++S      F RFNVSVGS GI+RGDDVCWLHAVFRA
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESYFPNQ--------VMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRA

Query:  KLAGGPGG
        K+AG P G
Subjt:  KLAGGPGG

TrEMBL top hitse value%identityAlignment
A0A5A7V638 Uncharacterized protein1.3e-2466.35Show/hide
Query:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAES----------------------YFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLA
        MTEILS RLYGTVCTQV+IELP+PDTLPTSAES                      YF NQVMSGLH V    FNVSVGSTGIVRGDDVCWLHAVFR K A
Subjt:  MTEILSPRLYGTVCTQVEIELPVPDTLPTSAES----------------------YFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLA

Query:  GGPG
          PG
Subjt:  GGPG

A0A5A7VD33 Putative DNA/RNA polymerases superfamily protein6.0e-1978.08Show/hide
Query:  VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGG
        VEIEL VPDTLPTSAE      SYF NQVMSGLH V    FNVSVGSTGIVRGDDVC LH VFRAK AGGPGG
Subjt:  VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGG

A0A5D3BMJ4 Retrotrans_gag domain-containing protein8.1e-2462.61Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL
        MTEILS RL+GTVCTQ                 VEIELPVPDTLPTS E      SYF NQVMSGLH V    FN+SV STGIVRGDDVCWLHAVFRAK 
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL

Query:  AGGP-GGVRNRKEER
         GGP GGV   +  R
Subjt:  AGGP-GGVRNRKEER

A0A5D3C0X3 Retrotrans_gag domain-containing protein1.6e-1957.41Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESYFPNQ--------VMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRA
        MTEILS +LY TVCT                  VEIELPVPDTLPTSAES+  NQ        ++S      F RFNVSVGS GI+RGDDVCWLHAVFRA
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESYFPNQ--------VMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRA

Query:  KLAGGPGG
        K+AG P G
Subjt:  KLAGGPGG

A0A5D3DIE3 Retrotrans_gag domain-containing protein1.2e-2266.04Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL
        MTEILS RLYGTVCTQ                 VEIELPV DTL   AE      SYF NQVMSGLH V    FNVSVGST IVRGDDVCWLHAVFRAK 
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAE------SYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKL

Query:  AGGPGG
        AGGPGG
Subjt:  AGGPGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTACTTTCCAAA
CCAGGTTATGTCAGGGCTGCACCATGTGTATTTTGAAAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTCC
GGGCTAAGCTAGCAGGTGGTCCGGGAGGGGTCAGAAATCGGAAGGAGGAGAGAGTAGAAAACAGAATTCGAGTCCCCTTCTTCAGTGACGACGAGGGGTTTAAATACCTG
CTCATGCTCCTAGGATTTTTAGGAATTCGGAGGCGTTTCGGGACAAACCAGGCGAAACCGGGGCGACCAAAGGCAGCAGGGACTGAACGGAGCCGGACGAGCTCAGCCCG
CACAAGGCCGAGGCCGAGCAGGGGGTCGGGCCAAAAGCTCGACCCCTTCGGTCTTGGCCCGACCTATTGGCCTGTTTCGCCTCTGGGGCCATCTTCCAGCCCTATTTCTG
TCCGGTTGTCCTCGTCAACTCCTTGTACATTGGAATCCAGGGCTTATCCACAAGGTCGACCTCGGCTTGGTCGGCCTCAGCCTGGTCGGCCTCAGCTTAGGCCAGGTGAA
CCTGTCTTAGAAGAAGTGCATGAGCTCGAGCCAGATGGGGTGAGGAAAACAGAGGAAAAGCTGGAATTTCCCAAGACCGTTCCGAGTCATCCGCGGGTCGTTGTTGACGA
GTCTTCTTCGCACCTAACCGGCTGTTTTGACCCCGAAACTGACTGGACAACTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTACTTTCCAAA
CCAGGTTATGTCAGGGCTGCACCATGTGTATTTTGAAAGGTTCAACGTTTCAGTAGGGTCAACAGGGATCGTTAGAGGTGACGATGTCTGTTGGCTTCACGCCGTCTTCC
GGGCTAAGCTAGCAGGTGGTCCGGGAGGGGTCAGAAATCGGAAGGAGGAGAGAGTAGAAAACAGAATTCGAGTCCCCTTCTTCAGTGACGACGAGGGGTTTAAATACCTG
CTCATGCTCCTAGGATTTTTAGGAATTCGGAGGCGTTTCGGGACAAACCAGGCGAAACCGGGGCGACCAAAGGCAGCAGGGACTGAACGGAGCCGGACGAGCTCAGCCCG
CACAAGGCCGAGGCCGAGCAGGGGGTCGGGCCAAAAGCTCGACCCCTTCGGTCTTGGCCCGACCTATTGGCCTGTTTCGCCTCTGGGGCCATCTTCCAGCCCTATTTCTG
TCCGGTTGTCCTCGTCAACTCCTTGTACATTGGAATCCAGGGCTTATCCACAAGGTCGACCTCGGCTTGGTCGGCCTCAGCCTGGTCGGCCTCAGCTTAGGCCAGGTGAA
CCTGTCTTAGAAGAAGTGCATGAGCTCGAGCCAGATGGGGTGAGGAAAACAGAGGAAAAGCTGGAATTTCCCAAGACCGTTCCGAGTCATCCGCGGGTCGTTGTTGACGA
GTCTTCTTCGCACCTAACCGGCTGTTTTGACCCCGAAACTGACTGGACAACTTTCTAG
Protein sequenceShow/hide protein sequence
MTEILSPRLYGTVCTQVEIELPVPDTLPTSAESYFPNQVMSGLHHVYFERFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGVRNRKEERVENRIRVPFFSDDEGFKYL
LMLLGFLGIRRRFGTNQAKPGRPKAAGTERSRTSSARTRPRPSRGSGQKLDPFGLGPTYWPVSPLGPSSSPISVRLSSSTPCTLESRAYPQGRPRLGRPQPGRPQLRPGE
PVLEEVHELEPDGVRKTEEKLEFPKTVPSHPRVVVDESSSHLTGCFDPETDWTTF