; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030354 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030354
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:25015149..25016865
RNA-Seq ExpressionSpg030354
SyntenySpg030354
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY08849.1 Uncharacterized protein TCM_024087 [Theobroma cacao]8.9e-2243.85Show/hide
Query:  WSQFCAKPEPVNSNIVREFYANIDDHEE----FKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRII
        W QFC +P+     +VREFYAN+ +H +     +GAQW+ S  E  +F+ + +K E   W+ F+  RLL +TH S V++DR +L +AI+   SIDVG++I
Subjt:  WSQFCAKPEPVNSNIVREFYANIDDHEE----FKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRII

Query:  SSEILDCWRKKVGKLFFPNTITMLCRRAGV
        S  IL   R K   + FP+ IT LC RAGV
Subjt:  SSEILDCWRKKVGKLFFPNTITMLCRRAGV

KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]4.4e-2128.82Show/hide
Query:  NNLARAKYVEMLR-RDFLFVRGF--GDD----LPRFLRTGIVNLGWSQFCAKPEPVNSNIVREFYANIDDHE-----------------------EFKGA
        + L + KY+  +R ++F   RG   GD+    +P +L   I    W Q C  P      +V+EFYAN   HE                         K  
Subjt:  NNLARAKYVEMLR-RDFLFVRGF--GDD----LPRFLRTGIVNLGWSQFCAKPEPVNSNIVREFYANIDDHE-----------------------EFKGA

Query:  QWRLSKTEKR------------TFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITML
         +  SK   +             F+   LK +      F++  LLPT+HDSTVSR+R+ + + I++   I+VG++I+ EI +C  +  GKLFF   IT  
Subjt:  QWRLSKTEKR------------TFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITML

Query:  CRRAGVPEDEDDVPLIDKGIID-TPNLARLQRTQEARQGGLVCGIHQMQEQLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNF
        CR A VP   D+ P+  KG++   P+ A  + T              M E+L  H +  + +  +LQT W+Y + RD  +   L+ N+
Subjt:  CRRAGVPEDEDDVPLIDKGIID-TPNLARLQRTQEARQGGLVCGIHQMQEQLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNF

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.1e-3031.91Show/hide
Query:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYAN--------------------------------IDDHEEF------------------KGAQWRLSKTE
        F+   I    W QFCA PE     +VREFYAN                                +D+H EF                   GA+W +S   
Subjt:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYAN--------------------------------IDDHEEF------------------KGAQWRLSKTE

Query:  KRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGI
          T   + L   A  W  F+K RLLPTTH  TVS+DR+LL  ++L   SI+VGR+I SEI  C  +K G LFFP+ IT LCR A  P   ++  L + G 
Subjt:  KRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGI

Query:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALP
        ID   +AR+ +   T+  +Q               G ++  +  ++++L      Q H  S ++   +Q Q  W+Y K RD AL+ ALQ+NF++P P  P
Subjt:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALP

Query:  VFPDDLLNPWIPPPPVEREEEDEEQGQED
         FP ++L         E E E ++ G  +
Subjt:  VFPDDLLNPWIPPPPVEREEEDEEQGQED

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.2e-2336.77Show/hide
Query:  LKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLAR
        L   A  W  F+K RLLPTTH  TVS+DR+LL +++L   SI+VGR+I SEI  C  +K G LFFP+ IT LCR A  P   ++  L   G ID   +AR
Subjt:  LKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLAR

Query:  LQRTQEAR--------------------QGGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDL
        +  TQE +                     G ++  +  ++++L      Q H  S ++   +Q Q  W+Y K RD AL+ ALQ+NF++P P  P FP +L
Subjt:  LQRTQEAR--------------------QGGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDL

Query:  LNPWIPPPPVEREEEDEEQGQED
        L         E E E ++ G  +
Subjt:  LNPWIPPPPVEREEEDEEQGQED

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.3e-2533.82Show/hide
Query:  VNLGWSQFCAKP-----EPVNSNIVREFYANIDDHE--------EFKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFA
        V + WS+          +PV+ +   EF  NI + E           GA+W +S     T   + L   A  W  F+K RLLPTTH   VS+DR+LL  +
Subjt:  VNLGWSQFCAKP-----EPVNSNIVREFYANIDDHE--------EFKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFA

Query:  ILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLARL--------------QRTQEARQGGLVCGIHQMQE
        +L   SI+VGR+I SEI  C  +K G LFFP+ IT LCR A    +E+   L + G ID   +AR+               R   A        + Q  +
Subjt:  ILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLARL--------------QRTQEARQGGLVCGIHQMQE

Query:  QLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDLLNPWIPPPPVEREEEDEEQGQED
         L+   S+ E   +Q Q  W+Y K RD AL+ ALQ+NF++P P  P FP ++L         E E E ++ G  +
Subjt:  QLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDLLNPWIPPPPVEREEEDEEQGQED

TrEMBL top hitse value%identityAlignment
A0A061F2U9 Uncharacterized protein4.3e-2243.85Show/hide
Query:  WSQFCAKPEPVNSNIVREFYANIDDHEE----FKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRII
        W QFC +P+     +VREFYAN+ +H +     +GAQW+ S  E  +F+ + +K E   W+ F+  RLL +TH S V++DR +L +AI+   SIDVG++I
Subjt:  WSQFCAKPEPVNSNIVREFYANIDDHEE----FKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRII

Query:  SSEILDCWRKKVGKLFFPNTITMLCRRAGV
        S  IL   R K   + FP+ IT LC RAGV
Subjt:  SSEILDCWRKKVGKLFFPNTITMLCRRAGV

A0A2P5BCG4 Uncharacterized protein (Fragment)1.5e-3031.91Show/hide
Query:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYAN--------------------------------IDDHEEF------------------KGAQWRLSKTE
        F+   I    W QFCA PE     +VREFYAN                                +D+H EF                   GA+W +S   
Subjt:  FLRTGIVNLGWSQFCAKPEPVNSNIVREFYAN--------------------------------IDDHEEF------------------KGAQWRLSKTE

Query:  KRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGI
          T   + L   A  W  F+K RLLPTTH  TVS+DR+LL  ++L   SI+VGR+I SEI  C  +K G LFFP+ IT LCR A  P   ++  L + G 
Subjt:  KRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGI

Query:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALP
        ID   +AR+ +   T+  +Q               G ++  +  ++++L      Q H  S ++   +Q Q  W+Y K RD AL+ ALQ+NF++P P  P
Subjt:  IDTPNLARLQR---TQEARQ---------------GGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALP

Query:  VFPDDLLNPWIPPPPVEREEEDEEQGQED
         FP ++L         E E E ++ G  +
Subjt:  VFPDDLLNPWIPPPPVEREEEDEEQGQED

A0A2P5CEY2 Uncharacterized protein6.0e-2436.77Show/hide
Query:  LKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLAR
        L   A  W  F+K RLLPTTH  TVS+DR+LL +++L   SI+VGR+I SEI  C  +K G LFFP+ IT LCR A  P   ++  L   G ID   +AR
Subjt:  LKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLAR

Query:  LQRTQEAR--------------------QGGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDL
        +  TQE +                     G ++  +  ++++L      Q H  S ++   +Q Q  W+Y K RD AL+ ALQ+NF++P P  P FP +L
Subjt:  LQRTQEAR--------------------QGGLVCGIHQMQEQL------QLH-SSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDL

Query:  LNPWIPPPPVEREEEDEEQGQED
        L         E E E ++ G  +
Subjt:  LNPWIPPPPVEREEEDEEQGQED

A0A2P5DXM3 Uncharacterized protein6.4e-2633.82Show/hide
Query:  VNLGWSQFCAKP-----EPVNSNIVREFYANIDDHE--------EFKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFA
        V + WS+          +PV+ +   EF  NI + E           GA+W +S     T   + L   A  W  F+K RLLPTTH   VS+DR+LL  +
Subjt:  VNLGWSQFCAKP-----EPVNSNIVREFYANIDDHE--------EFKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFA

Query:  ILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLARL--------------QRTQEARQGGLVCGIHQMQE
        +L   SI+VGR+I SEI  C  +K G LFFP+ IT LCR A    +E+   L + G ID   +AR+               R   A        + Q  +
Subjt:  ILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITMLCRRAGVPEDEDDVPLIDKGIIDTPNLARL--------------QRTQEARQGGLVCGIHQMQE

Query:  QLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDLLNPWIPPPPVEREEEDEEQGQED
         L+   S+ E   +Q Q  W+Y K RD AL+ ALQ+NF++P P  P FP ++L         E E E ++ G  +
Subjt:  QLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDLLNPWIPPPPVEREEEDEEQGQED

A0A7J6FZ22 Uncharacterized protein2.1e-2128.82Show/hide
Query:  NNLARAKYVEMLR-RDFLFVRGF--GDD----LPRFLRTGIVNLGWSQFCAKPEPVNSNIVREFYANIDDHE-----------------------EFKGA
        + L + KY+  +R ++F   RG   GD+    +P +L   I    W Q C  P      +V+EFYAN   HE                         K  
Subjt:  NNLARAKYVEMLR-RDFLFVRGF--GDD----LPRFLRTGIVNLGWSQFCAKPEPVNSNIVREFYANIDDHE-----------------------EFKGA

Query:  QWRLSKTEKR------------TFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITML
         +  SK   +             F+   LK +      F++  LLPT+HDSTVSR+R+ + + I++   I+VG++I+ EI +C  +  GKLFF   IT  
Subjt:  QWRLSKTEKR------------TFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITML

Query:  CRRAGVPEDEDDVPLIDKGIID-TPNLARLQRTQEARQGGLVCGIHQMQEQLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNF
        CR A VP   D+ P+  KG++   P+ A  + T              M E+L  H +  + +  +LQT W+Y + RD  +   L+ N+
Subjt:  CRRAGVPEDEDDVPLIDKGIID-TPNLARLQRTQEARQGGLVCGIHQMQEQLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAA
AGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGTTGAGGAACAAGAAAAGGCAACAGAGGCAGAAGAGGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGG
AGGTGATCATGCCGGAGGTACCAAAGCGTCGTCGCGTTAAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTGATACTCCTTCGCCTCCGACAACTGATTCTGAAAGA
GAAAATGCAAGAAGAGAGGAACGGGAAAAGAAGGAAGCTGAGGACAAGGCAAGAGAAGAAGAAGCAAAGAAAGCGGAAGAGGAGATTTTGCTCAAGCGAAGGGCGGAAAA
GGGCAAAAGCGTGGCTGAAGCATCGGAAGAACCTGACGAGACTGAGGAATCGAGATTTCCGTACAATCGCTTCGTCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGC
TGAGAAGGGACTTCCTGTTTGTACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCT
GTTAATTCCAACATTGTTCGAGAATTTTATGCCAATATTGACGATCACGAAGAATTTAAGGGGGCCCAGTGGAGACTGTCGAAGACGGAAAAGCGCACATTTCAGGCTGC
TTATTTGAAGAGCGAGGCCAATACATGGATGGGTTTCATCAAGCTGCGCTTACTGCCGACAACTCACGACTCAACGGTGTCTCGAGACCGGGTTTTGCTTGCCTTTGCTA
TTCTTCGTTCCATGAGTATTGATGTGGGTAGGATAATTTCTTCTGAGATTCTTGATTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACAATGCTA
TGCCGAAGGGCAGGGGTGCCAGAGGATGAGGATGATGTGCCATTAATAGACAAGGGGATAATTGACACACCAAATCTGGCTAGGCTTCAGAGGACGCAGGAAGCACGCCA
AGGAGGTTTGGTGTGCGGCATCCACCAAATGCAGGAGCAATTACAGCTGCATTCCAGTAGGATGGAATTTGTTGAAAGACAATTGCAGACTTTATGGAGCTATGTGAAAA
GGAGGGATGCCGCGTTGAGGGTAGCCTTGCAGTCGAATTTTTCCAAGCCATATCCGGCTTTACCCGTATTCCCTGACGACCTACTGAACCCTTGGATCCCGCCCCCACCT
GTTGAGAGAGAGGAAGAAGATGAGGAGCAGGGTCAGGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAAACGAGAGCTAGAAAAGAGAGGGAGAATGAGGACGAAGAGGTACCTGTTACCCCTGTAGCACAGAAAGCGAAAACGAAAAAGAAGAAGACGCCAGAGGAGAA
AGAAGCGAAAAGGAGGAGAAAGCAACAGAGGGTTGAGGAACAAGAAAAGGCAACAGAGGCAGAAGAGGTTCAGGTAACGGATAATGAGCCAGTGCAGGAGGCTCAAGTGG
AGGTGATCATGCCGGAGGTACCAAAGCGTCGTCGCGTTAAGAGGAAAGCAGGCCGCGCTAGGGTTGTCCGAACTGATACTCCTTCGCCTCCGACAACTGATTCTGAAAGA
GAAAATGCAAGAAGAGAGGAACGGGAAAAGAAGGAAGCTGAGGACAAGGCAAGAGAAGAAGAAGCAAAGAAAGCGGAAGAGGAGATTTTGCTCAAGCGAAGGGCGGAAAA
GGGCAAAAGCGTGGCTGAAGCATCGGAAGAACCTGACGAGACTGAGGAATCGAGATTTCCGTACAATCGCTTCGTCAATAACCTTGCTCGGGCAAAGTATGTTGAGATGC
TGAGAAGGGACTTCCTGTTTGTACGAGGATTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGTGAACCTCGGCTGGAGTCAATTTTGTGCGAAGCCGGAACCT
GTTAATTCCAACATTGTTCGAGAATTTTATGCCAATATTGACGATCACGAAGAATTTAAGGGGGCCCAGTGGAGACTGTCGAAGACGGAAAAGCGCACATTTCAGGCTGC
TTATTTGAAGAGCGAGGCCAATACATGGATGGGTTTCATCAAGCTGCGCTTACTGCCGACAACTCACGACTCAACGGTGTCTCGAGACCGGGTTTTGCTTGCCTTTGCTA
TTCTTCGTTCCATGAGTATTGATGTGGGTAGGATAATTTCTTCTGAGATTCTTGATTGCTGGCGGAAAAAGGTGGGGAAGCTGTTTTTCCCCAACACTATCACAATGCTA
TGCCGAAGGGCAGGGGTGCCAGAGGATGAGGATGATGTGCCATTAATAGACAAGGGGATAATTGACACACCAAATCTGGCTAGGCTTCAGAGGACGCAGGAAGCACGCCA
AGGAGGTTTGGTGTGCGGCATCCACCAAATGCAGGAGCAATTACAGCTGCATTCCAGTAGGATGGAATTTGTTGAAAGACAATTGCAGACTTTATGGAGCTATGTGAAAA
GGAGGGATGCCGCGTTGAGGGTAGCCTTGCAGTCGAATTTTTCCAAGCCATATCCGGCTTTACCCGTATTCCCTGACGACCTACTGAACCCTTGGATCCCGCCCCCACCT
GTTGAGAGAGAGGAAGAAGATGAGGAGCAGGGTCAGGAAGATTGA
Protein sequenceShow/hide protein sequence
MAKTRARKERENEDEEVPVTPVAQKAKTKKKKTPEEKEAKRRRKQQRVEEQEKATEAEEVQVTDNEPVQEAQVEVIMPEVPKRRRVKRKAGRARVVRTDTPSPPTTDSER
ENARREEREKKEAEDKAREEEAKKAEEEILLKRRAEKGKSVAEASEEPDETEESRFPYNRFVNNLARAKYVEMLRRDFLFVRGFGDDLPRFLRTGIVNLGWSQFCAKPEP
VNSNIVREFYANIDDHEEFKGAQWRLSKTEKRTFQAAYLKSEANTWMGFIKLRLLPTTHDSTVSRDRVLLAFAILRSMSIDVGRIISSEILDCWRKKVGKLFFPNTITML
CRRAGVPEDEDDVPLIDKGIIDTPNLARLQRTQEARQGGLVCGIHQMQEQLQLHSSRMEFVERQLQTLWSYVKRRDAALRVALQSNFSKPYPALPVFPDDLLNPWIPPPP
VEREEEDEEQGQED