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Spg030359 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030359
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:26714701..26716920
RNA-Seq ExpressionSpg030359
SyntenySpg030359
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052217.1 hypothetical protein E6C27_scaffold207G00280 [Cucumis melo var. makuwa]1.5e-0553.85Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT
        VE+ELLVPDT  TSAESS S S S         +  DDV WLH +FR K  GGPG GVT  +  T
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT

KAA0060199.1 uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa]4.4e-0557.63Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVT
        VE+EL VPDT  TSAES  S+S ST        +  DDV WLH +FR K AGGPG GVT
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVT

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]4.4e-0541.57Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQ--------------------------EGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFR
        VE+EL VPDT  TSAES  S+SS+  +                          EG    +  DDV WLHT+FR K+AGGPG GVT+R +
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQ--------------------------EGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFR

TYK00845.1 zf-CCHC domain-containing protein [Cucumis melo var. makuwa]2.3e-0652Show/hide
Query:  EVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLTGVYQRLTLIDS
        E+EL VPDT STSAESS S+S S         +  DDV WLH IFR K+ GGPG GVT     T  YQ+ T  +S
Subjt:  EVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLTGVYQRLTLIDS

TYK01784.1 hypothetical protein E5676_scaffold113G00120 [Cucumis melo var. makuwa]1.5e-0553.85Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT
        VE+ELLVPDT  TSAESS S S S         +  DDV WLH +FR K  GGPG GVT  +  T
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT

TrEMBL top hitse value%identityAlignment
A0A5A7UCL6 Reverse transcriptase domain-containing protein7.4e-0653.85Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT
        VE+ELLVPDT  TSAESS S S S         +  DDV WLH +FR K  GGPG GVT  +  T
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT

A0A5A7VIY9 Uncharacterized protein2.1e-0541.57Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQ--------------------------EGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFR
        VE+EL VPDT  TSAES  S+SS+  +                          EG    +  DDV WLHT+FR K+AGGPG GVT+R +
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQ--------------------------EGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFR

A0A5D3BAD1 Retrotrans_gag domain-containing protein2.1e-0557.63Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVT
        VE+EL VPDT  TSAES  S+S ST        +  DDV WLH +FR K AGGPG GVT
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVT

A0A5D3BNX1 Zf-CCHC domain-containing protein1.1e-0652Show/hide
Query:  EVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLTGVYQRLTLIDS
        E+EL VPDT STSAESS S+S S         +  DDV WLH IFR K+ GGPG GVT     T  YQ+ T  +S
Subjt:  EVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLTGVYQRLTLIDS

A0A5D3BRJ2 Reverse transcriptase domain-containing protein7.4e-0653.85Show/hide
Query:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT
        VE+ELLVPDT  TSAESS S S S         +  DDV WLH +FR K  GGPG GVT  +  T
Subjt:  VEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGAAATGGAAAACAGAGCACAGAATTTTCGTGCAAACCTGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGATTGTACAAGTTGAATCAGAAGC
TCTATTTGTTCTTCAGGTAGAGGTCGAGCTCTTGGTGCCTGATACACAGTCAACGTCTGCTGAAAGTTCCAGATCAAGTTCCAGTTCAACGTTTCAGGAGGGTCAACAGG
TATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACACCATCTTTCGGACTAAGCTAGCAGGTGGTCCGGGTAGGGGTGTGACAGATAGATTTCGATTAACCGGAGTTTAT
CAGCGATTGACACTGATAGACTCTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGAAATGGAAAACAGAGCACAGAATTTTCGTGCAAACCTGGAGGATCTCTGGTTTTCTCTGGTTTTTCGAGCATTCTGGATTGTACAAGTTGAATCAGAAGC
TCTATTTGTTCTTCAGGTAGAGGTCGAGCTCTTGGTGCCTGATACACAGTCAACGTCTGCTGAAAGTTCCAGATCAAGTTCCAGTTCAACGTTTCAGGAGGGTCAACAGG
TATCGTTAGAGGAGGACGATGTCCGTTGGCTTCACACCATCTTTCGGACTAAGCTAGCAGGTGGTCCGGGTAGGGGTGTGACAGATAGATTTCGATTAACCGGAGTTTAT
CAGCGATTGACACTGATAGACTCTGAATAA
Protein sequenceShow/hide protein sequence
MVFEMENRAQNFRANLEDLWFSLVFRAFWIVQVESEALFVLQVEVELLVPDTQSTSAESSRSSSSSTFQEGQQVSLEEDDVRWLHTIFRTKLAGGPGRGVTDRFRLTGVY
QRLTLIDSE