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Spg030361 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030361
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:26232580..26234879
RNA-Seq ExpressionSpg030361
SyntenySpg030361
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596946.1 hypothetical protein SDJN03_10126, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1148.67Show/hide
Query:  RIIFKPNPF------PVIENHWPCLLGQRYAK--ASKKDDDGGDEKAADQRSKTDRAPSMAEEFDRVAAEKQLKEAAEEEEVADQRVGKESEGLDKTA--
        RIIF  NP         ++ HWP LL +RY K    +KD     EK  D RS TDRAPSMAEEF+R+A EK LKEA            K+SE   KTA  
Subjt:  RIIFKPNPF------PVIENHWPCLLGQRYAK--ASKKDDDGGDEKAADQRSKTDRAPSMAEEFDRVAAEKQLKEAAEEEEVADQRVGKESEGLDKTA--

Query:  --LDQGPGYRPCS
          LD GP YRPCS
Subjt:  --LDQGPGYRPCS
TrEMBL top hitse value%identityAlignment
A0A0A0L2C8 Uncharacterized protein5.3e-0443.62Show/hide
Query:  PCLLGQRYAKASKKDDDGGDEKAADQRSKTDRAPSMAEEFDRVAAEKQLKEAAEEEEVA---DQRVGKESE-GLDKT-----ALDQGPGYRPCS
        P L  +RY K SK +     E +  +RSK +RAPS AEEF+R+A EKQ K+  EEE  A     +  KESE  ++K+      +++GP YRPCS
Subjt:  PCLLGQRYAKASKKDDDGGDEKAADQRSKTDRAPSMAEEFDRVAAEKQLKEAAEEEEVA---DQRVGKESE-GLDKT-----ALDQGPGYRPCS
A0A1S4DY64 uncharacterized protein LOC107990980 isoform X19.1e-0441.05Show/hide
Query:  NHWPCLLGQR--YAKASKKDDDGGDEKAADQRSKTDRAPSMAEEFDRVAAEKQLKEAAEEEEVADQRVGKESEGLDKTA-----LDQGPGYRPCS
        +++P  L  R  Y K   KD+    E++  +RSK +RAPS AEEF+R+A EK+ K+  EE +  D +V KES  + K++     +++GP YRPCS
Subjt:  NHWPCLLGQR--YAKASKKDDDGGDEKAADQRSKTDRAPSMAEEFDRVAAEKQLKEAAEEEEVADQRVGKESEGLDKTA-----LDQGPGYRPCS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCCCACAATCCTCCCTTTAAGATTACTCTAGAGAATACCAGTGCAATTCTAGTGGTGGTGTTCTTGGTGAATTTTGGAGAGAAATCCAGCAGAGATCGTGATTT
CGGAGCTATTGTCTTTTACAGAAAAGATCCACGGAGTTGGTGGAGAATTCGGTCAAGTCACAACGAAGGCTACGTCTTCTCCCCTTCAAACAAATTTATCTTGGTGGCAC
GTGAAGGTCAGCTTCACTCCAACAAACTTTTGACTTCACAGTCACAGAAGATGAAGATGAAGGTGAGGATGTGTACGCATATTTTGGATGGTAGGATCATCTTCAAGCCA
AATCCATTTCCAGTGATTGAGAATCATTGGCCATGTCTTTTGGGTCAGCGCTATGCCAAAGCAAGTAAAAAGGACGACGACGGCGGAGATGAAAAGGCCGCTGATCAGAG
ATCAAAGACCGACAGAGCTCCGTCGATGGCGGAGGAGTTCGATAGGGTGGCGGCTGAGAAGCAGCTGAAGGAGGCAGCGGAGGAGGAAGAGGTGGCTGATCAGAGGGTCG
GCAAGGAATCTGAAGGCTTGGATAAAACTGCCTTAGACCAAGGGCCTGGCTACCGCCCTTGTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCCCACAATCCTCCCTTTAAGATTACTCTAGAGAATACCAGTGCAATTCTAGTGGTGGTGTTCTTGGTGAATTTTGGAGAGAAATCCAGCAGAGATCGTGATTT
CGGAGCTATTGTCTTTTACAGAAAAGATCCACGGAGTTGGTGGAGAATTCGGTCAAGTCACAACGAAGGCTACGTCTTCTCCCCTTCAAACAAATTTATCTTGGTGGCAC
GTGAAGGTCAGCTTCACTCCAACAAACTTTTGACTTCACAGTCACAGAAGATGAAGATGAAGGTGAGGATGTGTACGCATATTTTGGATGGTAGGATCATCTTCAAGCCA
AATCCATTTCCAGTGATTGAGAATCATTGGCCATGTCTTTTGGGTCAGCGCTATGCCAAAGCAAGTAAAAAGGACGACGACGGCGGAGATGAAAAGGCCGCTGATCAGAG
ATCAAAGACCGACAGAGCTCCGTCGATGGCGGAGGAGTTCGATAGGGTGGCGGCTGAGAAGCAGCTGAAGGAGGCAGCGGAGGAGGAAGAGGTGGCTGATCAGAGGGTCG
GCAAGGAATCTGAAGGCTTGGATAAAACTGCCTTAGACCAAGGGCCTGGCTACCGCCCTTGTAGCTGA
Protein sequenceShow/hide protein sequence
MGSHNPPFKITLENTSAILVVVFLVNFGEKSSRDRDFGAIVFYRKDPRSWWRIRSSHNEGYVFSPSNKFILVAREGQLHSNKLLTSQSQKMKMKVRMCTHILDGRIIFKP
NPFPVIENHWPCLLGQRYAKASKKDDDGGDEKAADQRSKTDRAPSMAEEFDRVAAEKQLKEAAEEEEVADQRVGKESEGLDKTALDQGPGYRPCS