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Spg030365 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030365
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLIM and calponin domains-containing protein 1, putative
Genome locationscaffold6:25815335..25815880
RNA-Seq ExpressionSpg030365
SyntenySpg030365
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008480 - Protein of unknown function DUF761, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055857.1 putative LIM and calponin domains-containing protein 1 [Cucumis melo var. makuwa]3.5e-6275.92Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS
        MNKFKKS+ILVLLGLT LL ITPLLSSSLRPTYLYFIFNLLIIALG +AGLL      NDPP   +DK NKLS+T+PE   S++  S  KKHRALEKAHS
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS

Query:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA-EEVEEEVVGG----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
        DKI +GN KME LKKC SASSIF+IGEGDSE ++T   E++EEEVVGG    NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQK F
Subjt:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA-EEVEEEVVGG----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

KAG6577458.1 hypothetical protein SDJN03_25032, partial [Cucurbita argyrosperma subsp. sororia]6.7e-4560.22Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSGKKHRALEKAHSDKIPA
        M++ K+S+++++L LT LL ITPLLSSSLRPTYLYF+FNLLI+      GLLSSAFP+N           + +   + S  +S   HRALEKAHSD IP 
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSGKKHRALEKAHSDKIPA

Query:  GNPKMEVLKKCASASSIFFIGEGDSEVDDTAAEEVEEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
         NPK+E L KC SAS+IFFIG+GDSE    A EE      GGNGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+HGFY+K F
Subjt:  GNPKMEVLKKCASASSIFFIGEGDSEVDDTAAEEVEEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

KAG7015529.1 hypothetical protein SDJN02_23165, partial [Cucurbita argyrosperma subsp. argyrosperma]3.4e-4159.2Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSGKKHRALEKAHSDKIPA
        M++ K+S+++++L LT LL ITPLLSSSLRPTYLYF+FNLLI+      GLLSSAFP+N           + +   + S  +S   HRALEKAHSD IP 
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSGKKHRALEKAHSDKIPA

Query:  GNPKMEVLKKCASASSIFFIGEGDSEVDDTAAEEVEEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIH
         NPK+E L KC S S+IFFIG+GDSE    A EE      GGNGQ+LFAQAETFIGNFYKQL+MQK+ESWKN+H
Subjt:  GNPKMEVLKKCASASSIFFIGEGDSEVDDTAAEEVEEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIH

KGN56109.1 hypothetical protein Csa_011766 [Cucumis sativus]1.2e-5973.58Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS
        MNKFKKS+I+VLL LT LL ITPLLSSSLRPTYLYFIFNLLIIALG +AGLL      NDPP   +DK NKLS+T+PE   S++  S+ KKHRALEKAHS
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS

Query:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA--EEVEEEVVGG-----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
        DKI +GN KME LKKC SASSIF+IGEGDSE ++T    E+ EEEVV G     NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQK F
Subjt:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA--EEVEEEVVGG-----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

XP_021687628.1 uncharacterized protein LOC110670015 [Hevea brasiliensis]9.0e-4258.29Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNN------KLSVTAPESASAES--------SGKK
        M+KFKKSQI++L  L ALL +TPLLSSSLRP YLYFI NLLIIALGAEAGLLS+ F +   P EDK +      K  VTA E++S+          S KK
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNN------KLSVTAPESASAES--------SGKK

Query:  HRALEKAHSDKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAAEEV----EEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
           +EK+ S+KI   + K+E +KK  S+ S+FFIG G++EV+D A EE+    EEEV G +GQELF +AETFIGNFY QLKMQ+EESWK IHGFYQK F
Subjt:  HRALEKAHSDKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAAEEV----EEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

TrEMBL top hitse value%identityAlignment
A0A067F414 Uncharacterized protein3.1e-4059.69Show/hide
Query:  FKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSG-----KKHRALEKAHSDKI
        FKKSQIL+L  L +LL ITPLLSSSLRPTYLYF+FN+LIIALGAEAGLLSS  PS  PP++ KN + + T  E+  A +S      KK +A+EK+ S+KI
Subjt:  FKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSG-----KKHRALEKAHSDKI

Query:  PAGNPKMEVLKKCASASSIFFIGEGDSEV-------DDTAAEEVEEEVVGG-NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
         +G  K+  LKKC S  S+FFIG G++E         D   EE EEE VGG +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  PAGNPKMEVLKKCASASSIFFIGEGDSEV-------DDTAAEEVEEEVVGG-NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

A0A0A0L509 Uncharacterized protein6.0e-6073.58Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS
        MNKFKKS+I+VLL LT LL ITPLLSSSLRPTYLYFIFNLLIIALG +AGLL      NDPP   +DK NKLS+T+PE   S++  S+ KKHRALEKAHS
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS

Query:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA--EEVEEEVVGG-----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
        DKI +GN KME LKKC SASSIF+IGEGDSE ++T    E+ EEEVV G     NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQK F
Subjt:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA--EEVEEEVVGG-----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

A0A2H5QMS9 Uncharacterized protein1.8e-4059.69Show/hide
Query:  FKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSG-----KKHRALEKAHSDKI
        FKKSQIL+L  L +LL ITPLLSSSLRPTYLYF+FN+LIIALGAEAGLLSS  PS  PP++ KN + + T  E+  A +S      KK +A+EK+ S+KI
Subjt:  FKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSG-----KKHRALEKAHSDKI

Query:  PAGNPKMEVLKKCASASSIFFIGEGDSE-------VDDTAAEEVEEEVVGG-NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
         +G  K+  LKKC S  S+FFIG G++E       + D   EE EEE VGG +GQELF +AE FIGNFYKQLKMQ+E+SWK I GFYQK F
Subjt:  PAGNPKMEVLKKCASASSIFFIGEGDSE-------VDDTAAEEVEEEVVGG-NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

A0A5D3DK86 Putative LIM and calponin domains-containing protein 11.7e-6275.92Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS
        MNKFKKS+ILVLLGLT LL ITPLLSSSLRPTYLYFIFNLLIIALG +AGLL      NDPP   +DK NKLS+T+PE   S++  S  KKHRALEKAHS
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPP--DEDKNNKLSVTAPE---SASAESSGKKHRALEKAHS

Query:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA-EEVEEEVVGG----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
        DKI +GN KME LKKC SASSIF+IGEGDSE ++T   E++EEEVVGG    NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQK F
Subjt:  DKIPAGNPKMEVLKKCASASSIFFIGEGDSEVDDTAA-EEVEEEVVGG----NGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

B9STZ2 Uncharacterized protein1.1e-4056.19Show/hide
Query:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPE-----SASAESSGKKHRALEKAHS
        M+KFKKSQ+L+L  L ALL +TPLLSSS+RP YLYFI NLLI+ALGAEAGLLS+AF S    D D+ + + V+  +     S+  ++   K R +EK+ S
Subjt:  MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPE-----SASAESSGKKHRALEKAHS

Query:  DKIPAGN--PKMEVLKKCASASSIFFIGEGDSEVDDT------AAEEVEEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF
        +KI   +   K+E +KKC S  S+FFIG G++EV D         E  EEEV G +GQELF +AETFIGNFYKQLKMQ+EESWK IHGFYQK F
Subjt:  DKIPAGN--PKMEVLKKCASASSIFFIGEGDSEVDDT------AAEEVEEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAGTTCAAGAAATCTCAAATTCTAGTGCTTTTGGGCCTCACAGCGCTCCTAGGAATCACACCTCTTCTTTCCTCATCCCTAAGGCCTACCTATCTCTACTTCAT
CTTCAACCTCCTCATCATTGCCCTTGGAGCAGAAGCTGGGCTTCTCTCATCAGCCTTCCCAAGTAATGATCCTCCAGATGAGGACAAGAACAACAAGCTTTCTGTGACTG
CACCCGAAAGCGCTTCCGCAGAAAGCTCCGGGAAGAAGCACAGGGCTTTGGAGAAGGCTCACTCCGACAAGATTCCTGCTGGTAATCCGAAAATGGAAGTTCTGAAGAAG
TGTGCCTCTGCTTCGAGCATCTTCTTCATCGGAGAGGGCGACAGTGAGGTGGATGACACGGCGGCGGAGGAGGTGGAAGAGGAGGTTGTCGGCGGAAATGGGCAAGAACT
GTTTGCCCAAGCTGAGACGTTTATTGGCAACTTCTACAAGCAGTTGAAGATGCAGAAAGAGGAGTCTTGGAAAAACATTCATGGTTTCTATCAGAAGGGCTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAGTTCAAGAAATCTCAAATTCTAGTGCTTTTGGGCCTCACAGCGCTCCTAGGAATCACACCTCTTCTTTCCTCATCCCTAAGGCCTACCTATCTCTACTTCAT
CTTCAACCTCCTCATCATTGCCCTTGGAGCAGAAGCTGGGCTTCTCTCATCAGCCTTCCCAAGTAATGATCCTCCAGATGAGGACAAGAACAACAAGCTTTCTGTGACTG
CACCCGAAAGCGCTTCCGCAGAAAGCTCCGGGAAGAAGCACAGGGCTTTGGAGAAGGCTCACTCCGACAAGATTCCTGCTGGTAATCCGAAAATGGAAGTTCTGAAGAAG
TGTGCCTCTGCTTCGAGCATCTTCTTCATCGGAGAGGGCGACAGTGAGGTGGATGACACGGCGGCGGAGGAGGTGGAAGAGGAGGTTGTCGGCGGAAATGGGCAAGAACT
GTTTGCCCAAGCTGAGACGTTTATTGGCAACTTCTACAAGCAGTTGAAGATGCAGAAAGAGGAGTCTTGGAAAAACATTCATGGTTTCTATCAGAAGGGCTTTTAA
Protein sequenceShow/hide protein sequence
MNKFKKSQILVLLGLTALLGITPLLSSSLRPTYLYFIFNLLIIALGAEAGLLSSAFPSNDPPDEDKNNKLSVTAPESASAESSGKKHRALEKAHSDKIPAGNPKMEVLKK
CASASSIFFIGEGDSEVDDTAAEEVEEEVVGGNGQELFAQAETFIGNFYKQLKMQKEESWKNIHGFYQKGF