; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030372 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030372
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:26928915..26949020
RNA-Seq ExpressionSpg030372
SyntenySpg030372
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]6.9e-1245.83Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQE
        F+K  LLPTTH  TVS+DR+LL+ ++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L + G +D   +AR+  TQE
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.2e-1332.4Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL------QRT
        F+K RLLPTTH  TVS+DR+LL+ ++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L + G +D   +AR+      + T
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL------QRT

Query:  QEARQGGLVCGIHN-----IQEQLQLLSSR--------------MEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP
        Q+           N     I +QL+ L  R              ++   +Q Q FW Y        ++     F  P P
Subjt:  QEARQGGLVCGIHN-----IQEQLQLLSSR--------------MEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]6.3e-1330.94Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQEAR--
        F+K RLLPTTH  TVS+DR+LL++++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L   G +D   +AR+  TQE +  
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQEAR--

Query:  ------------------QGGLVCGIHNIQEQLQL-------LSSRMEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP
                           G ++  +  ++++L         + S ++   +Q Q FW Y        ++     F  P P
Subjt:  ------------------QGGLVCGIHNIQEQLQL-------LSSRMEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]6.3e-1333.93Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL---------
        F+K RLLPTTH   VS+DR+LL+ ++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L + G +D   +AR+         
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL---------

Query:  QRTQEARQGGLVCGIHN--IQEQLQLLSSRM---EFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP
        Q+   +R         N  + +QL+ L  R+   E   +Q Q FW Y        ++     F  P P
Subjt:  QRTQEARQGGLVCGIHN--IQEQLQLLSSRM---EFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.9e-1029.34Show/hide
Query:  MGFIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILM---DKGIMDTPNLARLQRTQ
        + FI+  L PTTHDS++S ++++L++ +    +I+VGK++   I  C +++ GKLFFP+ I  L  +AG+P   +D+++    +K  +D   +++L+   
Subjt:  MGFIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILM---DKGIMDTPNLARLQRTQ

Query:  EARQGGLVCGI-HNIQEQLQLLSSRMEF-AERQFQMFWNYGSVETLCKQRRDATLFVLPKPRALQRR
        E  +G  + G+   ++E L+   S M+F  E++ +M      VE L   + D T  +    R +++R
Subjt:  EARQGGLVCGI-HNIQEQLQLLSSRMEF-AERQFQMFWNYGSVETLCKQRRDATLFVLPKPRALQRR

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.4e-1245.83Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQE
        F+K  LLPTTH  TVS+DR+LL+ ++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L + G +D   +AR+  TQE
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)1.0e-1332.4Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL------QRT
        F+K RLLPTTH  TVS+DR+LL+ ++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L + G +D   +AR+      + T
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL------QRT

Query:  QEARQGGLVCGIHN-----IQEQLQLLSSR--------------MEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP
        Q+           N     I +QL+ L  R              ++   +Q Q FW Y        ++     F  P P
Subjt:  QEARQGGLVCGIHN-----IQEQLQLLSSR--------------MEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP

A0A2P5CEY2 Uncharacterized protein3.0e-1330.94Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQEAR--
        F+K RLLPTTH  TVS+DR+LL++++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L   G +D   +AR+  TQE +  
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQEAR--

Query:  ------------------QGGLVCGIHNIQEQLQL-------LSSRMEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP
                           G ++  +  ++++L         + S ++   +Q Q FW Y        ++     F  P P
Subjt:  ------------------QGGLVCGIHNIQEQLQL-------LSSRMEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP

A0A2P5CXU3 Uncharacterized protein (Fragment)1.8e-1042.86Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL
        F+K RLLPTTH   VS++ VLL++++    SI+VG+II  EI +C  +K G LFFP+ IT +C+ A  P    +  L + G +D   +AR+
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL

A0A2P5DXM3 Uncharacterized protein3.0e-1333.93Show/hide
Query:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL---------
        F+K RLLPTTH   VS+DR+LL+ ++    SI+VG++I SEI +C  +K G LFFP+ IT LC+ A  P    +  L + G +D   +AR+         
Subjt:  FIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARL---------

Query:  QRTQEARQGGLVCGIHN--IQEQLQLLSSRM---EFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP
        Q+   +R         N  + +QL+ L  R+   E   +Q Q FW Y        ++     F  P P
Subjt:  QRTQEARQGGLVCGIHN--IQEQLQLLSSRM---EFAERQFQMFWNYGSVETLCKQRRDATLFVLPKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTATCAAGCAAAGGTTGCTTCCTACAACTCATGACTCCACAGTTTCTCGGGATAGAGTTCTTCTAGTTTTTGCGATTTTCAGATCACTGAGTATTGACGTCGG
CAAGATCATCTCCAGTGAGATTCATAGTTGCTGGAGAAAGAAGGTGGGCAAATTGTTTTTCCCTAACACGATCACTATGCTATGCCAAAGGGCAGGGCTTCCCACAAGCG
CTGAAGATGTGATATTAATGGACAAAGGGATTATGGACACACCAAACTTGGCAAGGCTGCAAAGGACGCAGGAAGCTCGCCAAGGTGGACTGGTGTGCGGCATCCACAAT
ATCCAAGAACAACTTCAACTTTTGTCTAGCCGTATGGAATTTGCTGAAAGGCAATTTCAAATGTTCTGGAACTATGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGA
CGCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAAGGTAGCGTCGCGACGCTACCCCCAATCCGGGCCTATAAAAAGGCACCCTTGG
GTGCCTCATTTACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGT
GGGAAATATTTTGGGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGAGTTGCCTGACATTGAGGATGAGCATGA
AATGCATAAAAAAGATTACTTGGTAGATAATTTTGAGTCTGATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGAATGCATGAACCCTGATAATGTTA
ATACCTTTGATTCGTGTCCTGATAATGTATATAGCATAGAATCTGACCCAGAGGAACTCGAATCTGTGCATAGTATAGAATCTGACCCTGAAGAGCTTGAATTCTTTAAT
TCTGATAGTGAGCCATGTGATAGCCTAGTCGAATCATTTTTTAATACTGAGTCTGAGGAATCTGAGGAGCATGTAAATGTTTTTTCTGATGAATGGTCTGGCATGATTGA
TAGGCCATCTTTAGATCCTAGACCGGTAGATATTATAACTCTTGATGACTCGGTTAACAATTGCTTTGTGAATAGAGACTTAGAAAAGAGATTTGATGTTGTTACATATT
TTCTGCAATGTTATTATGATAATCTCTTTAGTGATGATGGGCCAAGGGAAAGTTTTTTTTCTCCCCTGTTTGCGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGAC
GCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAAGGTAGCGTCGCGACGCTACCCCCAATCCGGGCCTATAAAAAGGCACCCTTGGG
TGCCTCATTTACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGTG
GGAAATATTTTGGGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGGCTTAGGAGAAGTGCCTATGGATGATGAG
GATTTTGATCACAATGCATATTTGAATAATCCTCTGTTTGAGAATGATTTAGAACTGCCTGACTTTGAAAATGAATTAGACTTGCCTGCTTGTGACAATGAAAGATCTGC
AGTTGATGATTTACCTTCCTTTGAGAATGAATTAGATTTGCCTGAAATGGATAATTTTGATGATGATATAGAGTTGCCTGACATTGAGGATGAGCATGAAATGCATAAAA
AAGATTACTTGGTAGATAATTTTGAGTCTGATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGAATGCATGAACCCTGATAATGTTAATACCTTTGAT
TCGTGTCCTGATAATGTATATAGCATAGAATCTGACCCAGAGGAACTCGAATCTGTGCATAGTATAGAATCTGACCCTGAAGAGCTTGAATTCTTTAATTCTGATAGTGA
GCCATGTGATAGCCTAGTCGAATCATTTTTTAATACTGAGTCTGAGGAATCTGAGGAGCATGTAAATGTTTTTTCTGATGAATGGTCTGGCATGATTGATAGGCCATCTT
TAGATCCTAGACCGGTAGATATTATAACTCTTGATGACTCGGTTAACAATTGCTTTGTGAATAGAGACTTAGAAAAGAGATTTGATGTTGTTACATATTTTCTGCAATGT
TATTATGATAATCTCTTTAGTGATGATGGGCCAAGGGAAAGTTTTTTTTCTCCCCTGTTTGCGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGACGCTACCCTTTT
CGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAAGGTAGAAAAGAAGATAAAAGCAGGATGGCAGGCACAACAAGAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTTATCAAGCAAAGGTTGCTTCCTACAACTCATGACTCCACAGTTTCTCGGGATAGAGTTCTTCTAGTTTTTGCGATTTTCAGATCACTGAGTATTGACGTCGG
CAAGATCATCTCCAGTGAGATTCATAGTTGCTGGAGAAAGAAGGTGGGCAAATTGTTTTTCCCTAACACGATCACTATGCTATGCCAAAGGGCAGGGCTTCCCACAAGCG
CTGAAGATGTGATATTAATGGACAAAGGGATTATGGACACACCAAACTTGGCAAGGCTGCAAAGGACGCAGGAAGCTCGCCAAGGTGGACTGGTGTGCGGCATCCACAAT
ATCCAAGAACAACTTCAACTTTTGTCTAGCCGTATGGAATTTGCTGAAAGGCAATTTCAAATGTTCTGGAACTATGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGA
CGCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAAGGTAGCGTCGCGACGCTACCCCCAATCCGGGCCTATAAAAAGGCACCCTTGG
GTGCCTCATTTACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGT
GGGAAATATTTTGGGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGAGTTGCCTGACATTGAGGATGAGCATGA
AATGCATAAAAAAGATTACTTGGTAGATAATTTTGAGTCTGATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGAATGCATGAACCCTGATAATGTTA
ATACCTTTGATTCGTGTCCTGATAATGTATATAGCATAGAATCTGACCCAGAGGAACTCGAATCTGTGCATAGTATAGAATCTGACCCTGAAGAGCTTGAATTCTTTAAT
TCTGATAGTGAGCCATGTGATAGCCTAGTCGAATCATTTTTTAATACTGAGTCTGAGGAATCTGAGGAGCATGTAAATGTTTTTTCTGATGAATGGTCTGGCATGATTGA
TAGGCCATCTTTAGATCCTAGACCGGTAGATATTATAACTCTTGATGACTCGGTTAACAATTGCTTTGTGAATAGAGACTTAGAAAAGAGATTTGATGTTGTTACATATT
TTCTGCAATGTTATTATGATAATCTCTTTAGTGATGATGGGCCAAGGGAAAGTTTTTTTTCTCCCCTGTTTGCGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGAC
GCTACCCTTTTCGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAAGGTAGCGTCGCGACGCTACCCCCAATCCGGGCCTATAAAAAGGCACCCTTGGG
TGCCTCATTTACCATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGTG
GGAAATATTTTGGGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGGCTTAGGAGAAGTGCCTATGGATGATGAG
GATTTTGATCACAATGCATATTTGAATAATCCTCTGTTTGAGAATGATTTAGAACTGCCTGACTTTGAAAATGAATTAGACTTGCCTGCTTGTGACAATGAAAGATCTGC
AGTTGATGATTTACCTTCCTTTGAGAATGAATTAGATTTGCCTGAAATGGATAATTTTGATGATGATATAGAGTTGCCTGACATTGAGGATGAGCATGAAATGCATAAAA
AAGATTACTTGGTAGATAATTTTGAGTCTGATCGTGATTACACTGAATCTATTGAGTCTGATCTTGACATTCCTGAATGCATGAACCCTGATAATGTTAATACCTTTGAT
TCGTGTCCTGATAATGTATATAGCATAGAATCTGACCCAGAGGAACTCGAATCTGTGCATAGTATAGAATCTGACCCTGAAGAGCTTGAATTCTTTAATTCTGATAGTGA
GCCATGTGATAGCCTAGTCGAATCATTTTTTAATACTGAGTCTGAGGAATCTGAGGAGCATGTAAATGTTTTTTCTGATGAATGGTCTGGCATGATTGATAGGCCATCTT
TAGATCCTAGACCGGTAGATATTATAACTCTTGATGACTCGGTTAACAATTGCTTTGTGAATAGAGACTTAGAAAAGAGATTTGATGTTGTTACATATTTTCTGCAATGT
TATTATGATAATCTCTTTAGTGATGATGGGCCAAGGGAAAGTTTTTTTTCTCCCCTGTTTGCGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGACGCTACCCTTTT
CGTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAAGGTAGAAAAGAAGATAAAAGCAGGATGGCAGGCACAACAAGAAACTAA
Protein sequenceShow/hide protein sequence
MGFIKQRLLPTTHDSTVSRDRVLLVFAIFRSLSIDVGKIISSEIHSCWRKKVGKLFFPNTITMLCQRAGLPTSAEDVILMDKGIMDTPNLARLQRTQEARQGGLVCGIHN
IQEQLQLLSSRMEFAERQFQMFWNYGSVETLCKQRRDATLFVLPKPRALQRRDAVQGSVATLPPIRAYKKAPLGASFTINQFILQSILSFLWLLWSLSQGFLAFLREFFS
GKYFGEFWEHLRKLKGVFGGALSAKRRELPDIEDEHEMHKKDYLVDNFESDRDYTESIESDLDIPECMNPDNVNTFDSCPDNVYSIESDPEELESVHSIESDPEELEFFN
SDSEPCDSLVESFFNTESEESEEHVNVFSDEWSGMIDRPSLDPRPVDIITLDDSVNNCFVNRDLEKRFDVVTYFLQCYYDNLFSDDGPRESFFSPLFAGSVETLCKQRRD
ATLFVLPKPRALQRRDAVQGSVATLPPIRAYKKAPLGASFTINQFILQSILSFLWLLWSLSQGFLAFLREFFSGKYFGEFWEHLRKLKGVFGGALSAKRRGLGEVPMDDE
DFDHNAYLNNPLFENDLELPDFENELDLPACDNERSAVDDLPSFENELDLPEMDNFDDDIELPDIEDEHEMHKKDYLVDNFESDRDYTESIESDLDIPECMNPDNVNTFD
SCPDNVYSIESDPEELESVHSIESDPEELEFFNSDSEPCDSLVESFFNTESEESEEHVNVFSDEWSGMIDRPSLDPRPVDIITLDDSVNNCFVNRDLEKRFDVVTYFLQC
YYDNLFSDDGPRESFFSPLFAGSVETLCKQRRDATLFVLPKPRALQRRDAVQGRKEDKSRMAGTTRN