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Spg030386 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030386
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold6:25295584..25297011
RNA-Seq ExpressionSpg030386
SyntenySpg030386
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]5.1e-0826.2Show/hide
Query:  KWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALL-DCLDDDFLSAVLLAVARPGAKWDGNGTAR-TLKSQ
        KW     +P S   +LV +FY          + VRG  I F+S  IN  + LQ+V   +G+A+  +  D +    VL  +     +W+G  T+R ++  +
Subjt:  KWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALL-DCLDDDFLSAVLLAVARPGAKWDGNGTAR-TLKSQ

Query:  LLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEV
         L+  A LW H+                             PID+GRI+V  +     K   A   P L+T+LCR   +   + +E+
Subjt:  LLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEV

KAF4378427.1 hypothetical protein F8388_021621 [Cannabis sativa]7.8e-0927.12Show/hide
Query:  MTEQISQRKWENVCQNPRSYAPALVSDFY----RAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKW--
        + E I +RKWE +C++P S    +V +FY     ++W     +++VR   + FS   IN  ++L+++   E +     L D  +  ++  + +PGA+W  
Subjt:  MTEQISQRKWENVCQNPRSYAPALVSDFY----RAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKW--

Query:  DGNGTARTLKSQLLEFEATLWMHWGTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRK
        D +G  R  +S L      L       +++G+++   +   A + KG  F P L+T LCR +  +P   E+    RK
Subjt:  DGNGTARTLKSQLLEFEATLWMHWGTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]6.0e-0927.87Show/hide
Query:  MTEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWD--GNG
        + + I Q  W+  C +P      LV +FY    + + D V +RG  +  S   IN+++ L D P  E +  ++ +    L  VL  VA  GA+W+    G
Subjt:  MTEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWD--GNG

Query:  TARTLKSQLLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCR
            L+S  L   A +W H+                           G  I++GR++   +C  AA+  GA F P L+TS+CR
Subjt:  TARTLKSQLLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCR

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]2.0e-1233.05Show/hide
Query:  MTEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWDGNGTA
        +T  I +  W+   Q P    P +V DFYR   H+  D V  +G T+ FS+ +IN +Y+++D P+A GN ++D   ++ +   L  +A+PG +W  +   
Subjt:  MTEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWDGNGTA

Query:  -RTLKSQLLEFEATLWMH
         RTL+S+ L  +  LW++
Subjt:  -RTLKSQLLEFEATLWMH

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]1.1e-0723.67Show/hide
Query:  TEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWDGN-GTA
        T  + +  WE   Q      P +V  FY+ + H   D V+++G  + FS+  IN +Y+++D+P+A GN ++D   ++ +   L  + + G +W  +    
Subjt:  TEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWDGN-GTA

Query:  RTLKSQLLEFEATLWMHWGTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRKDFDEQWWARVTSTRNRRLQGSTQQPTAPA
        +TL S  L  EA LW++    +   RI+  +  +T ++ +       ++ + C A  +L      + A  K+  ++   +  S R    + +T  P    
Subjt:  RTLKSQLLEFEATLWMHWGTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRKDFDEQWWARVTSTRNRRLQGSTQQPTAPA

Query:  SQPTEPS
          P+EP+
Subjt:  SQPTEPS

TrEMBL top hitse value%identityAlignment
A0A2G9G807 Uncharacterized protein1.8e-0624.9Show/hide
Query:  ISQRKWENVCQNPRSYAPALVSDFY-RAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVP-NAEGNALLDCLDDDFLSAVLLAVARPGAKWD-GNGTAR
        + +RKW+    +P S    LV +FY  A  H  L + LVRG  + F S  IN +Y +  +  +A  N   + +D + L+  L      GA+W    G   
Subjt:  ISQRKWENVCQNPRSYAPALVSDFY-RAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVP-NAEGNALLDCLDDDFLSAVLLAVARPGAKWD-GNGTAR

Query:  TLKSQLLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRKDFD
        + KS  L+  A +W+ +                           G   D+G+I+ D++ Q+A   +   + P L+T LC  + +     EE+   R   D
Subjt:  TLKSQLLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRKDFD

Query:  EQWWARVTSTRNRRLQGSTQQPTAPASQPTEPSPAPEAQKKKRRKQTAGRYHRPAIQ
             R+ +  +    G         SQP  P P P   KK      + + HR A++
Subjt:  EQWWARVTSTRNRRLQGSTQQPTAPASQPTEPSPAPEAQKKKRRKQTAGRYHRPAIQ

A0A2P5DAQ2 Uncharacterized protein2.9e-0927.87Show/hide
Query:  MTEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWD--GNG
        + + I Q  W+  C +P      LV +FY    + + D V +RG  +  S   IN+++ L D P  E +  ++ +    L  VL  VA  GA+W+    G
Subjt:  MTEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWD--GNG

Query:  TARTLKSQLLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCR
            L+S  L   A +W H+                           G  I++GR++   +C  AA+  GA F P L+TS+CR
Subjt:  TARTLKSQLLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCR

A0A6A3ASF6 Uncharacterized protein1.0e-0625.97Show/hide
Query:  QNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALL-DCLDDDFLSAVLLAVARPGAKWDGNGTAR-TLKSQLLEFEA
        ++P S   +LV +FY          + VRG  I F+S  IN  + LQ+V   +G+A+L +  D +    VL  +     +W+G  T+R ++  + L+  A
Subjt:  QNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALL-DCLDDDFLSAVLLAVARPGAKWDGNGTAR-TLKSQLLEFEA

Query:  TLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEV
         LW H+                             PID+GRI+V  +     K   A   P L+T+LC    +   + +E+
Subjt:  TLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEV

A0A6A3BU96 Uncharacterized protein2.5e-0826.2Show/hide
Query:  KWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALL-DCLDDDFLSAVLLAVARPGAKWDGNGTAR-TLKSQ
        KW     +P S   +LV +FY          + VRG  I F+S  IN  + LQ+V   +G+A+  +  D +    VL  +     +W+G  T+R ++  +
Subjt:  KWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALL-DCLDDDFLSAVLLAVARPGAKWDGNGTAR-TLKSQ

Query:  LLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEV
         L+  A LW H+                             PID+GRI+V  +     K   A   P L+T+LCR   +   + +E+
Subjt:  LLEFEATLWMHW---------------------------GTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEV

A0A7J6G6G2 Fanconi-associated nuclease3.8e-0927.12Show/hide
Query:  MTEQISQRKWENVCQNPRSYAPALVSDFY----RAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKW--
        + E I +RKWE +C++P S    +V +FY     ++W     +++VR   + FS   IN  ++L+++   E +     L D  +  ++  + +PGA+W  
Subjt:  MTEQISQRKWENVCQNPRSYAPALVSDFY----RAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKW--

Query:  DGNGTARTLKSQLLEFEATLWMHWGTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRK
        D +G  R  +S L      L       +++G+++   +   A + KG  F P L+T LCR +  +P   E+    RK
Subjt:  DGNGTARTLKSQLLEFEATLWMHWGTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGCAAATCTCCCAGCGCAAATGGGAAAATGTCTGCCAAAATCCTCGCAGCTATGCTCCTGCGCTAGTCTCTGACTTCTACCGAGCGCAGTGGCATGACGAGCT
TGACGAAGTCTTAGTGCGAGGCCACACCATCGCCTTTTCCTCCGCCCACATCAACAGTGTATATGAGCTACAAGACGTTCCCAACGCAGAAGGGAATGCGCTCCTTGACT
GTCTAGATGATGACTTCCTAAGCGCAGTACTTCTTGCGGTGGCCAGACCTGGGGCCAAATGGGATGGAAATGGAACTGCTAGGACCCTCAAATCGCAACTGCTCGAGTTT
GAGGCCACGCTTTGGATGCACTGGGGCACCCCAATCGACCTCGGCCGCATCCTTGTAGACACCTTGTGCCAGACTGCTGCAAAACCTAAGGGCGCAAAATTCTGTCCAGG
ACTGGTCACATCCCTTTGCCGCGCATCAAATCTATTGCCCGCATCAGATGAGGAAGTACGAGCAATGCGGAAGGACTTTGATGAGCAATGGTGGGCGCGTGTTACAAGCA
CTCGCAATAGGCGTCTGCAAGGAAGCACGCAACAGCCAACAGCCCCCGCATCTCAACCCACCGAGCCTTCGCCTGCGCCTGAGGCACAAAAGAAGAAAAGGCGTAAGCAA
ACCGCAGGCCGGTACCATCGCCCAGCTATACAGACGCCTCAACACACTTCTCCAACGCAGGAAAGCACTGCCACGGATGTATTGCGACCAGAGGAGAATGCTGAAGACAC
ATTACCGAACCCCATTCGCAATGAGGAAGTTCCTGCGCCGAACCCTCTGCTGCAAGCCTCTGCGAGTACCACTCAGGATGGGACCGATCTCACGATTGATGTGGACGAAG
CACTTATCTTCTCGCAGATGCGGCAAATAATTCACGAAAAGTATAGAGCCCTTGCGACTACAGCAAGAGAGGATGTGCCAGCAGCAAGAGTTGCTGCACAAGCAACAAGA
AGAACTATCACAAAGGGTGAATGCATTAGTCCTCTTCTTGACACGATGGACGGACTCATTTGGTCGCCTACCTGTCGCACCAAACTTGTTCATACGACCAGCTGCAGCAC
AAAGACCTTCTGGTGCGGGCCCTTCTCACATGTGTCCTCGAAGAGTACCACCCGCTCCAAGAGATCCAAGACCACCGCCACCACCACCGCAGGAATAGAGAAATCACTTA
CTTTCCTTTTCATCTTTTGTTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGAGCAAATCTCCCAGCGCAAATGGGAAAATGTCTGCCAAAATCCTCGCAGCTATGCTCCTGCGCTAGTCTCTGACTTCTACCGAGCGCAGTGGCATGACGAGCT
TGACGAAGTCTTAGTGCGAGGCCACACCATCGCCTTTTCCTCCGCCCACATCAACAGTGTATATGAGCTACAAGACGTTCCCAACGCAGAAGGGAATGCGCTCCTTGACT
GTCTAGATGATGACTTCCTAAGCGCAGTACTTCTTGCGGTGGCCAGACCTGGGGCCAAATGGGATGGAAATGGAACTGCTAGGACCCTCAAATCGCAACTGCTCGAGTTT
GAGGCCACGCTTTGGATGCACTGGGGCACCCCAATCGACCTCGGCCGCATCCTTGTAGACACCTTGTGCCAGACTGCTGCAAAACCTAAGGGCGCAAAATTCTGTCCAGG
ACTGGTCACATCCCTTTGCCGCGCATCAAATCTATTGCCCGCATCAGATGAGGAAGTACGAGCAATGCGGAAGGACTTTGATGAGCAATGGTGGGCGCGTGTTACAAGCA
CTCGCAATAGGCGTCTGCAAGGAAGCACGCAACAGCCAACAGCCCCCGCATCTCAACCCACCGAGCCTTCGCCTGCGCCTGAGGCACAAAAGAAGAAAAGGCGTAAGCAA
ACCGCAGGCCGGTACCATCGCCCAGCTATACAGACGCCTCAACACACTTCTCCAACGCAGGAAAGCACTGCCACGGATGTATTGCGACCAGAGGAGAATGCTGAAGACAC
ATTACCGAACCCCATTCGCAATGAGGAAGTTCCTGCGCCGAACCCTCTGCTGCAAGCCTCTGCGAGTACCACTCAGGATGGGACCGATCTCACGATTGATGTGGACGAAG
CACTTATCTTCTCGCAGATGCGGCAAATAATTCACGAAAAGTATAGAGCCCTTGCGACTACAGCAAGAGAGGATGTGCCAGCAGCAAGAGTTGCTGCACAAGCAACAAGA
AGAACTATCACAAAGGGTGAATGCATTAGTCCTCTTCTTGACACGATGGACGGACTCATTTGGTCGCCTACCTGTCGCACCAAACTTGTTCATACGACCAGCTGCAGCAC
AAAGACCTTCTGGTGCGGGCCCTTCTCACATGTGTCCTCGAAGAGTACCACCCGCTCCAAGAGATCCAAGACCACCGCCACCACCACCGCAGGAATAGAGAAATCACTTA
CTTTCCTTTTCATCTTTTGTTTATAG
Protein sequenceShow/hide protein sequence
MTEQISQRKWENVCQNPRSYAPALVSDFYRAQWHDELDEVLVRGHTIAFSSAHINSVYELQDVPNAEGNALLDCLDDDFLSAVLLAVARPGAKWDGNGTARTLKSQLLEF
EATLWMHWGTPIDLGRILVDTLCQTAAKPKGAKFCPGLVTSLCRASNLLPASDEEVRAMRKDFDEQWWARVTSTRNRRLQGSTQQPTAPASQPTEPSPAPEAQKKKRRKQ
TAGRYHRPAIQTPQHTSPTQESTATDVLRPEENAEDTLPNPIRNEEVPAPNPLLQASASTTQDGTDLTIDVDEALIFSQMRQIIHEKYRALATTAREDVPAARVAAQATR
RTITKGECISPLLDTMDGLIWSPTCRTKLVHTTSCSTKTFWCGPFSHVSSKSTTRSKRSKTTATTTAGIEKSLTFLFIFCL