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Spg030391 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030391
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-protease polyprotein
Genome locationscaffold6:24884825..24887738
RNA-Seq ExpressionSpg030391
SyntenySpg030391
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025730.1 hypothetical protein E6C27_scaffold653G00110 [Cucumis melo var. makuwa]7.0e-0450.94Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ LKGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

KAA0053405.1 hypothetical protein E6C27_scaffold428G00740 [Cucumis melo var. makuwa]7.0e-0449.06Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P+I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ +KGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

TYK06160.1 hypothetical protein E5676_scaffold287G00090 [Cucumis melo var. makuwa]7.0e-0450.94Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ LKGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

TYK15886.1 hypothetical protein E5676_scaffold637G00670 [Cucumis melo var. makuwa]7.0e-0449.06Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P+I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ +KGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

TrEMBL top hitse value%identityAlignment
A0A5A7SHV1 Uncharacterized protein3.4e-0450.94Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ LKGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

A0A5A7UI79 Uncharacterized protein3.4e-0449.06Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P+I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ +KGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

A0A5D3C4A5 Uncharacterized protein3.4e-0450.94Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ LKGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

A0A5D3C9R3 Uncharacterized protein5.8e-0450.94Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P  ++ +  P+ PL+NN FEVQP N++PSRA E+VGP+VQ  ++ LKGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

A0A5D3CZK8 Uncharacterized protein3.4e-0449.06Show/hide
Query:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL
        P+I++ +  P+ PL+NN F+VQP N++PSRA E+VGP+VQ  ++ +KGT   L
Subjt:  PRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRLYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATCTGTTTATGATCCAATCAATAAACAGCAATTCCAATCGGGCCAGGAGAGGATGGGTGCCCTTGTTCAAGACCCGGAATCAGCCTTTAAGGGAACACACATC
TGCTTACCCCAATAGGGGAAGGAGTGAATTCCATCTTGTAATGTTATGTTCCCAGCCCCCACTTGGTCTTGCCCCTGAAATGGATACCCCCACTCACATGTCTCCTACAT
GGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGTCGTATCACATAATGTTACCAGAATAAGCAACCCTCTTGTGCGAACACCACCAATCGGCTACACCGGT
ATATCTCTAAGACTTCTTGAAGCAGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAACCAAGTTAGTGTTCATTC
GTTAATTGTGGGTCACTCCACTAAAGACCCTCAGCTGCACTCTTCTCACTGTAGAATATTTCTGTGTCCACGGATATCAACCAATACTACAATCCCCAGTGCTCCTCTAA
TGAACAACCTGTTTGAGGTCCAACCAACAAACAGAAGTCCCTCTCGTGCCATAGAGAGGGTTGGGCCCATTGTTCAAGTCCCGGAGACACCACTTAAGGGAACACGCCTC
TACTTACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAATCTGTTTATGATCCAATCAATAAACAGCAATTCCAATCGGGCCAGGAGAGGATGGGTGCCCTTGTTCAAGACCCGGAATCAGCCTTTAAGGGAACACACATC
TGCTTACCCCAATAGGGGAAGGAGTGAATTCCATCTTGTAATGTTATGTTCCCAGCCCCCACTTGGTCTTGCCCCTGAAATGGATACCCCCACTCACATGTCTCCTACAT
GGATGCTTTGGATCATTGCATCTGTATCGAATACAAAGTGGGTCGTATCACATAATGTTACCAGAATAAGCAACCCTCTTGTGCGAACACCACCAATCGGCTACACCGGT
ATATCTCTAAGACTTCTTGAAGCAGTGGGACCTAATGGACCTACAGATCAGAAGCTCCAACGATACGAGACTAATCGGCTTAAACTCATTAACCAAGTTAGTGTTCATTC
GTTAATTGTGGGTCACTCCACTAAAGACCCTCAGCTGCACTCTTCTCACTGTAGAATATTTCTGTGTCCACGGATATCAACCAATACTACAATCCCCAGTGCTCCTCTAA
TGAACAACCTGTTTGAGGTCCAACCAACAAACAGAAGTCCCTCTCGTGCCATAGAGAGGGTTGGGCCCATTGTTCAAGTCCCGGAGACACCACTTAAGGGAACACGCCTC
TACTTACCCTAG
Protein sequenceShow/hide protein sequence
MNNLFMIQSINSNSNRARRGWVPLFKTRNQPLREHTSAYPNRGRSEFHLVMLCSQPPLGLAPEMDTPTHMSPTWMLWIIASVSNTKWVVSHNVTRISNPLVRTPPIGYTG
ISLRLLEAVGPNGPTDQKLQRYETNRLKLINQVSVHSLIVGHSTKDPQLHSSHCRIFLCPRISTNTTIPSAPLMNNLFEVQPTNRSPSRAIERVGPIVQVPETPLKGTRL
YLP