; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030396 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030396
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold6:26697825..26702919
RNA-Seq ExpressionSpg030396
SyntenySpg030396
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]4.4e-2435.68Show/hide
Query:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT
        F+TRVI Q+ W++FC H    +VPLV EF+  L + +   V V+   V F++  IN ++ ++  +     D     + +Q++  L  VA +G  W+ S  
Subjt:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT

Query:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILAC-GRKKAGKLFFGSLIIQLCQRVKIVPGPSQSSEAL
           T +  +LK  + +W HFL  R MP+TH  T++ +RV+LLYSI+ G+ +NI  I  +EI AC   +K G L+F SLI QL  +  +   P    EA+
Subjt:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILAC-GRKKAGKLFFGSLIIQLCQRVKIVPGPSQSSEAL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.8e-3038.39Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN
        ++ R    EKGF    S   G L  F+ +VI+Q+ W++FCAH ++ +VPLV EF+  L +   + V VRG  VS+S   IN V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN

Query:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG
         +   +   L+ VA  G +W  S     T + S L   + +W HFLK+ L+PTTH  T+S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF 
Subjt:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG

Query:  SLIIQLCQRVK
        SLI +LC+  +
Subjt:  SLIIQLCQRVK

PON41193.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii]2.6e-2436.26Show/hide
Query:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT
        F   VI+Q+ W+ FCA+ ++ ++PLV EF+  + +       +  ++  F    IN ++ ++ P+    ++ ++  +  ++   L+ VA    +W  S  
Subjt:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT

Query:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLC
           T + S L L + +W HFLK+ L+PTTH  T+S +R +LLYSI+ G  IN+G II +EI AC  KK G LFF SLII+LC
Subjt:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLC

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.1e-3030.48Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN
        ++ R    EKGF    S   G L  F+ +VI+Q+ W++FCAH ++ +VPLV EF+  L +   + V VRG  VS+S   IN V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN

Query:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG
         + + +   L+ VA  G +W  S     T + S L   + +W HFLK+RL+PTTH  T+S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF 
Subjt:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG

Query:  SLIIQLCQRVKI-------------------------------VPGPSQSSEALAIA-------YQQLDQIKDNL---------------------RTYW
        SLI +LC+  +                                   PS S  A A +        QQL  ++  L                     + +W
Subjt:  SLIIQLCQRVKI-------------------------------VPGPSQSSEALAIA-------YQQLDQIKDNL---------------------RTYW

Query:  AYAKERDEAIREFHLSIVQSIAPVFSDFSQSLLPQEEKDSDDEEDDENEDE
        AY+KERD A+++   +      P F  F Q +L   + + + E D +  +E
Subjt:  AYAKERDEAIREFHLSIVQSIAPVFSDFSQSLLPQEEKDSDDEEDDENEDE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.8e-2837.63Show/hide
Query:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT
        F+  VI Q+ WQ FCAH ++ +VPLV EF+  +       V +RG  V  S   IN ++ +  P+    ++ +++ +  ++   L+ VA  G +W  S  
Subjt:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT

Query:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLCQRVK
           T + S L   + +W HFLK+RL+PTTH  T+S E V LLYS++ G  IN+G +I  EI AC  +K+G LFF SLI  +C+  +
Subjt:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLCQRVK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)8.9e-3138.39Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN
        ++ R    EKGF    S   G L  F+ +VI+Q+ W++FCAH ++ +VPLV EF+  L +   + V VRG  VS+S   IN V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN

Query:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG
         +   +   L+ VA  G +W  S     T + S L   + +W HFLK+ L+PTTH  T+S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF 
Subjt:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG

Query:  SLIIQLCQRVK
        SLI +LC+  +
Subjt:  SLIIQLCQRVK

A0A2P5AXB5 Uncharacterized protein1.2e-2436.26Show/hide
Query:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT
        F   VI+Q+ W+ FCA+ ++ ++PLV EF+  + +       +  ++  F    IN ++ ++ P+    ++ ++  +  ++   L+ VA    +W  S  
Subjt:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT

Query:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLC
           T + S L L + +W HFLK+ L+PTTH  T+S +R +LLYSI+ G  IN+G II +EI AC  KK G LFF SLII+LC
Subjt:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLC

A0A2P5BCG4 Uncharacterized protein (Fragment)5.2e-3130.48Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN
        ++ R    EKGF    S   G L  F+ +VI+Q+ W++FCAH ++ +VPLV EF+  L +   + V VRG  VS+S   IN V+ +  P+    ++ I+N
Subjt:  MRKRDFLNEKGF----SNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKN

Query:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG
         + + +   L+ VA  G +W  S     T + S L   + +W HFLK+RL+PTTH  T+S +R++LL+S++ G  IN+G +I  EI AC  +K G LFF 
Subjt:  PSTKQMKEALKMVANKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFG

Query:  SLIIQLCQRVKI-------------------------------VPGPSQSSEALAIA-------YQQLDQIKDNL---------------------RTYW
        SLI +LC+  +                                   PS S  A A +        QQL  ++  L                     + +W
Subjt:  SLIIQLCQRVKI-------------------------------VPGPSQSSEALAIA-------YQQLDQIKDNL---------------------RTYW

Query:  AYAKERDEAIREFHLSIVQSIAPVFSDFSQSLLPQEEKDSDDEEDDENEDE
        AY+KERD A+++   +      P F  F Q +L   + + + E D +  +E
Subjt:  AYAKERDEAIREFHLSIVQSIAPVFSDFSQSLLPQEEKDSDDEEDDENEDE

A0A2P5DAQ2 Uncharacterized protein1.9e-2837.63Show/hide
Query:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT
        F+  VI Q+ WQ FCAH ++ +VPLV EF+  +       V +RG  V  S   IN ++ +  P+    ++ +++ +  ++   L+ VA  G +W  S  
Subjt:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT

Query:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLCQRVK
           T + S L   + +W HFLK+RL+PTTH  T+S E V LLYS++ G  IN+G +I  EI AC  +K+G LFF SLI  +C+  +
Subjt:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLCQRVK

W9QTD9 Uncharacterized protein2.1e-2435.68Show/hide
Query:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT
        F+TRVI Q+ W++FC H    +VPLV EF+  L + +   V V+   V F++  IN ++ ++  +     D     + +Q++  L  VA +G  W+ S  
Subjt:  FVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVANKGVQWKESQT

Query:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILAC-GRKKAGKLFFGSLIIQLCQRVKIVPGPSQSSEAL
           T +  +LK  + +W HFL  R MP+TH  T++ +RV+LLYSI+ G+ +NI  I  +EI AC   +K G L+F SLI QL  +  +   P    EA+
Subjt:  KVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILAC-GRKKAGKLFFGSLIIQLCQRVKIVPGPSQSSEAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAAGAGATTTCCTCAACGAGAAGGGATTCTCTAATAGAGCGGGGACACTGCGAGAGTTCGTAACCAGAGTTATCTCACAATACAAGTGGCAGGAGTTCTGTGC
TCACCTTCAGGAGGCTATGGTGCCTTTAGTTCTGGAATTTTGGGTCGGACTGAGGGAGAAAAGCATGAGTATGGTAGTAGTGAGAGGCAAGATGGTCAGCTTCTCTTCTG
TTGACATCAACCAGGTGTACAAAATTAAAGCACCCTTGCATCGAAGAGGGAACGATGCCATTAAGAACCCCTCGACCAAACAAATGAAAGAAGCACTGAAAATGGTGGCC
AACAAGGGAGTTCAGTGGAAAGAGTCCCAAACTAAGGTGAGGACATTAGTGCCAAGCGATCTCAAGCTAGAATCGGCATTGTGGCTTCACTTTCTGAAGAACAGGTTGAT
GCCAACAACCCATGACAGCACTATCTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTGGAGATCAACATTGGGAGCATTATCAGGGAGGAAATCCTTG
CCTGTGGAAGGAAGAAAGCAGGAAAGCTCTTCTTCGGGTCATTGATCATCCAACTATGTCAGAGGGTGAAGATAGTCCCTGGGCCCTCACAGTCATCTGAAGCCCTAGCA
ATTGCCTATCAACAACTGGACCAAATCAAGGACAACCTGAGGACTTATTGGGCTTATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTCACCTCTCTATCGTCCAGAG
TATTGCTCCTGTCTTTTCTGATTTCTCTCAATCGCTGCTGCCTCAAGAAGAAAAGGATTCTGATGATGAAGAAGATGATGAAAATGAAGATGAAAGAGAGAGTTCCTCGG
ATGAGGACTATGGGAGTTTTTCTGATCCCCCTTTACATGTTGTTTTTCTTGTGAACTTTGCTCGTAGCTGGATATCTTCACCACAAAGTGTCGATAAGCTAGAACGAAGG
AATTTGACCCAATTTGGTGTTGTGCAAGAAAACAGAGGAAAGTTGGAAATTGTCCAGAAATGCGACCGCATTTCTTGGAAGGCTAAAATCAAATGCGACCGCATTTCTGG
AAAAACAGAGGTCGTTCCGAGTCCGTCGCGGGTCGGCAAGCTGCCTAAGGTACCCTATAACAACTATAGGGTTATAGATTGCATTCGTGAATTATCTATGTTGAAGTCGA
GTCACAGAAATGTGCATAACGTGCTCCAGCCGCACCAGCGTCCAGACGTTGATGTCACAACATCTCGATGTTGTGACGTAATCGACTTGTTGCCCAAGTTGTTGCGGCAT
CGAGACGTTGTCCTCAGCGTCTCGACGCTGCCTTTCAGCTGGGAATCTGATCTTCACGGATTTGGGCTGAATTGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAAAGAGATTTCCTCAACGAGAAGGGATTCTCTAATAGAGCGGGGACACTGCGAGAGTTCGTAACCAGAGTTATCTCACAATACAAGTGGCAGGAGTTCTGTGC
TCACCTTCAGGAGGCTATGGTGCCTTTAGTTCTGGAATTTTGGGTCGGACTGAGGGAGAAAAGCATGAGTATGGTAGTAGTGAGAGGCAAGATGGTCAGCTTCTCTTCTG
TTGACATCAACCAGGTGTACAAAATTAAAGCACCCTTGCATCGAAGAGGGAACGATGCCATTAAGAACCCCTCGACCAAACAAATGAAAGAAGCACTGAAAATGGTGGCC
AACAAGGGAGTTCAGTGGAAAGAGTCCCAAACTAAGGTGAGGACATTAGTGCCAAGCGATCTCAAGCTAGAATCGGCATTGTGGCTTCACTTTCTGAAGAACAGGTTGAT
GCCAACAACCCATGACAGCACTATCTCAGTAGAGAGAGTTATGCTCCTCTACAGTATTATGAAGGGTTTGGAGATCAACATTGGGAGCATTATCAGGGAGGAAATCCTTG
CCTGTGGAAGGAAGAAAGCAGGAAAGCTCTTCTTCGGGTCATTGATCATCCAACTATGTCAGAGGGTGAAGATAGTCCCTGGGCCCTCACAGTCATCTGAAGCCCTAGCA
ATTGCCTATCAACAACTGGACCAAATCAAGGACAACCTGAGGACTTATTGGGCTTATGCCAAGGAGAGAGATGAAGCCATTAGAGAGTTTCACCTCTCTATCGTCCAGAG
TATTGCTCCTGTCTTTTCTGATTTCTCTCAATCGCTGCTGCCTCAAGAAGAAAAGGATTCTGATGATGAAGAAGATGATGAAAATGAAGATGAAAGAGAGAGTTCCTCGG
ATGAGGACTATGGGAGTTTTTCTGATCCCCCTTTACATGTTGTTTTTCTTGTGAACTTTGCTCGTAGCTGGATATCTTCACCACAAAGTGTCGATAAGCTAGAACGAAGG
AATTTGACCCAATTTGGTGTTGTGCAAGAAAACAGAGGAAAGTTGGAAATTGTCCAGAAATGCGACCGCATTTCTTGGAAGGCTAAAATCAAATGCGACCGCATTTCTGG
AAAAACAGAGGTCGTTCCGAGTCCGTCGCGGGTCGGCAAGCTGCCTAAGGTACCCTATAACAACTATAGGGTTATAGATTGCATTCGTGAATTATCTATGTTGAAGTCGA
GTCACAGAAATGTGCATAACGTGCTCCAGCCGCACCAGCGTCCAGACGTTGATGTCACAACATCTCGATGTTGTGACGTAATCGACTTGTTGCCCAAGTTGTTGCGGCAT
CGAGACGTTGTCCTCAGCGTCTCGACGCTGCCTTTCAGCTGGGAATCTGATCTTCACGGATTTGGGCTGAATTGTGTTTGA
Protein sequenceShow/hide protein sequence
MRKRDFLNEKGFSNRAGTLREFVTRVISQYKWQEFCAHLQEAMVPLVLEFWVGLREKSMSMVVVRGKMVSFSSVDINQVYKIKAPLHRRGNDAIKNPSTKQMKEALKMVA
NKGVQWKESQTKVRTLVPSDLKLESALWLHFLKNRLMPTTHDSTISVERVMLLYSIMKGLEINIGSIIREEILACGRKKAGKLFFGSLIIQLCQRVKIVPGPSQSSEALA
IAYQQLDQIKDNLRTYWAYAKERDEAIREFHLSIVQSIAPVFSDFSQSLLPQEEKDSDDEEDDENEDERESSSDEDYGSFSDPPLHVVFLVNFARSWISSPQSVDKLERR
NLTQFGVVQENRGKLEIVQKCDRISWKAKIKCDRISGKTEVVPSPSRVGKLPKVPYNNYRVIDCIRELSMLKSSHRNVHNVLQPHQRPDVDVTTSRCCDVIDLLPKLLRH
RDVVLSVSTLPFSWESDLHGFGLNCV