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Spg030454 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030454
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationscaffold6:34205726..34206901
RNA-Seq ExpressionSpg030454
SyntenySpg030454
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143661.1 uncharacterized protein LOC101216661 [Cucumis sativus]7.0e-0688.89Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MERKVLVVCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
XP_008467305.1 PREDICTED: uncharacterized protein LOC103504685 [Cucumis melo]7.0e-0688.89Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MERKVLVVCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
XP_022995248.1 uncharacterized protein LOC111490852 [Cucurbita maxima]3.5e-0583.33Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MER+VL+VCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
XP_023532125.1 uncharacterized protein LOC111794385 [Cucurbita pepo subsp. pepo]3.5e-0583.33Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MER+VL+VCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
XP_038874324.1 uncharacterized protein LOC120067025 [Benincasa hispida]7.0e-0688.89Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MERKVLVVCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
TrEMBL top hitse value%identityAlignment
A0A0A0KRK6 Uncharacterized protein3.4e-0688.89Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MERKVLVVCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
A0A1S3CT83 uncharacterized protein LOC1035046853.4e-0688.89Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MERKVLVVCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
A0A6J1DXZ3 uncharacterized protein LOC1110251912.2e-0583.33Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MER+VLVVCS+VGLLGILSA TGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
A0A6J1H3L5 uncharacterized protein LOC1114597091.7e-0583.33Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MER+VL+VCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
A0A6J1K7C7 uncharacterized protein LOC1114908521.7e-0583.33Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MER+VL+VCS+VGLLGILSAVTGFVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G17210.1 Protein of unknown function (DUF1218)1.7e-0563.89Show/hide
Query:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV
        MER+ +V+C ++ LLG+LSAVT FVAEATRIK + V
Subjt:  MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAAAGGTTTTGGTGGTGTGTTCAATTGTGGGTTTATTGGGAATTTTGTCAGCTGTTACTGGTTTTGTTGCTGAGGCTACAAGAATCAAGAATGCTGCAGTTGG
CAGTTGTTTCATGGGATTAATCAAGATTGAAGCTCCTTGTTGTCCTTGTGTATTTGTTTCTCAAGCATTAGCTTTGTATGCCGCTGGTTCAAAAATTGGCTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAAAGGTTTTGGTGGTGTGTTCAATTGTGGGTTTATTGGGAATTTTGTCAGCTGTTACTGGTTTTGTTGCTGAGGCTACAAGAATCAAGAATGCTGCAGTTGG
CAGTTGTTTCATGGGATTAATCAAGATTGAAGCTCCTTGTTGTCCTTGTGTATTTGTTTCTCAAGCATTAGCTTTGTATGCCGCTGGTTCAAAAATTGGCTTTGATTGA
Protein sequenceShow/hide protein sequence
MERKVLVVCSIVGLLGILSAVTGFVAEATRIKNAAVGSCFMGLIKIEAPCCPCVFVSQALALYAAGSKIGFD