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Spg030471 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030471
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold6:32409820..32411000
RNA-Seq ExpressionSpg030471
SyntenySpg030471
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]5.5e-1330Show/hide
Query:  AASPKNPSPEVFKDVNFQERM------EIMKKRDFLNEKGF---SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQN--------
        AA P + + +V  +  F +        E +  R+ + EKGF    +     P F+S +I    WQ FC HP + IV LV EFYA+L+  GQN        
Subjt:  AASPKNPSPEVFKDVNFQERM------EIMKKRDFLNEKGF---SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQN--------

Query:  ---------------------------SSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
                                   +  +Q+K+ LK +A  G QW  S     +    +L+P + VW HF+ +RL+ +TH  TIS +R +LLY ++ G
Subjt:  ---------------------------SSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.6e-1230.87Show/hide
Query:  PEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------SAKQMKDALKLVANKGVQWKESQ
        P F++R+I Q+ W+ FC HP   IV LV EFYA+L +  Q +                                   + +Q++  L  VA +G  W+ S 
Subjt:  PEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------SAKQMKDALKLVANKGVQWKESQ

Query:  TKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
            + +  +LK  + +W HF+  R MP+TH  T++ DRV+LLY I+ G
Subjt:  TKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.6e-1531.4Show/hide
Query:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +  +N+                                   
Subjt:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------

Query:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
        +   +   L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G
Subjt:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.2e-1527.12Show/hide
Query:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDG-----------------------------------QNS
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +                                     QN 
Subjt:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDG-----------------------------------QNS

Query:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRSVTS------SRPTIDL---S
        + + +   L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G      R + S      +R T  L   S
Subjt:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRSVTS------SRPTIDL---S

Query:  LIGKLQQNS-----IQRKDKASTSQATPQSGPNVASPSQHTPFTGPSPSSEALAIAYRHVDQIRENMKT----------------------------YWA
        LI +L +N+     +  +   +T +    +   +A          PS S  A A + R    I + +K                             +WA
Subjt:  LIGKLQQNS-----IQRKDKASTSQATPQSGPNVASPSQHTPFTGPSPSSEALAIAYRHVDQIRENMKT----------------------------YWA

Query:  YAKERDEAIREFYLSTAPSIALVFPNFPQSLLPQEDKDSDEEDDEEDNENDEEE
        Y+KERD A+++   +        FP FPQ +L   D + + E D +D  N+  E
Subjt:  YAKERDEAIREFYLSTAPSIALVFPNFPQSLLPQEDKDSDEEDDEEDNENDEEE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]2.7e-1228.12Show/hide
Query:  KAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASL----------------------
        KA   ++ + E+  + N Q R  +  +++F+ +   ++K    P F++ +I Q+ WQ FCAHP++ IV LV EFY ++                      
Subjt:  KAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASL----------------------

Query:  -------------REDGQNSSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
                      E  ++ +  ++   L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S + V LLY ++ G
Subjt:  -------------REDGQNSSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.7e-1531.4Show/hide
Query:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +  +N+                                   
Subjt:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------

Query:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
        +   +   L+ VA  G +W  S     + + S L P + VW HF+K+ L+PTTH  T+S DR++LL+ ++ G
Subjt:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

A0A2P5BCG4 Uncharacterized protein (Fragment)5.7e-1627.12Show/hide
Query:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDG-----------------------------------QNS
        ++ R    EKGF    S   G LP F++++I+Q+ W+ FCAHP++ IV LV EFYA+L +                                     QN 
Subjt:  MKKRDFLNEKGF----SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDG-----------------------------------QNS

Query:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRSVTS------SRPTIDL---S
        + + +   L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S DR++LL+ ++ G      R + S      +R T  L   S
Subjt:  SAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRSVTS------SRPTIDL---S

Query:  LIGKLQQNS-----IQRKDKASTSQATPQSGPNVASPSQHTPFTGPSPSSEALAIAYRHVDQIRENMKT----------------------------YWA
        LI +L +N+     +  +   +T +    +   +A          PS S  A A + R    I + +K                             +WA
Subjt:  LIGKLQQNS-----IQRKDKASTSQATPQSGPNVASPSQHTPFTGPSPSSEALAIAYRHVDQIRENMKT----------------------------YWA

Query:  YAKERDEAIREFYLSTAPSIALVFPNFPQSLLPQEDKDSDEEDDEEDNENDEEE
        Y+KERD A+++   +        FP FPQ +L   D + + E D +D  N+  E
Subjt:  YAKERDEAIREFYLSTAPSIALVFPNFPQSLLPQEDKDSDEEDDEEDNENDEEE

A0A2P5DAQ2 Uncharacterized protein1.3e-1228.12Show/hide
Query:  KAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASL----------------------
        KA   ++ + E+  + N Q R  +  +++F+ +   ++K    P F++ +I Q+ WQ FCAHP++ IV LV EFY ++                      
Subjt:  KAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASL----------------------

Query:  -------------REDGQNSSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
                      E  ++ +  ++   L+ VA  G +W  S     + + S L P + VW HF+K+RL+PTTH  T+S + V LLY ++ G
Subjt:  -------------REDGQNSSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

W9QTD9 Uncharacterized protein7.7e-1330.87Show/hide
Query:  PEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------SAKQMKDALKLVANKGVQWKESQ
        P F++R+I Q+ W+ FC HP   IV LV EFYA+L +  Q +                                   + +Q++  L  VA +G  W+ S 
Subjt:  PEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNS-----------------------------------SAKQMKDALKLVANKGVQWKESQ

Query:  TKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
            + +  +LK  + +W HF+  R MP+TH  T++ DRV+LLY I+ G
Subjt:  TKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

W9RBS1 Uncharacterized protein2.7e-1330Show/hide
Query:  AASPKNPSPEVFKDVNFQERM------EIMKKRDFLNEKGF---SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQN--------
        AA P + + +V  +  F +        E +  R+ + EKGF    +     P F+S +I    WQ FC HP + IV LV EFYA+L+  GQN        
Subjt:  AASPKNPSPEVFKDVNFQERM------EIMKKRDFLNEKGF---SNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQN--------

Query:  ---------------------------SSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG
                                   +  +Q+K+ LK +A  G QW  S     +    +L+P + VW HF+ +RL+ +TH  TIS +R +LLY ++ G
Subjt:  ---------------------------SSAKQMKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCTCTCCTGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAAAAATCCATCTCCTGAGGTATTTAAAGATGT
CAATTTTCAGGAACGGATGGAGATCATGAAGAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAAAGCAGGAGCACTGCCAGAGTTCGTGAGTAGGATCATTTCGC
AGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTATTGTGTCTCTAGTTCTTGAATTTTATGCCAGCCTGAGGGAAGATGGTCAGAACTCTTCGGCCAAACAG
ATGAAAGATGCATTGAAGCTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACAGACGAAAGTGAAGTCTTTGGTGCCAAGCGATCTAAAGCCAGAATCGGCAGTTTG
GCTTCACTTCATCAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCATTATGAAGGGATCGTTCCAGGCAAGGA
CGAGAAGCGTCACTTCTTCAAGACCGACCATTGACCTGTCCTTGATTGGAAAGCTCCAACAAAACAGTATCCAGAGAAAAGACAAAGCCTCTACATCTCAGGCTACTCCT
CAATCAGGGCCGAATGTAGCTTCTCCATCCCAACACACTCCTTTCACAGGGCCTTCACCATCATCGGAAGCCCTAGCCATTGCCTACCGCCATGTAGATCAAATCAGGGA
GAACATGAAAACATATTGGGCATATGCAAAAGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTACCGCCCCAAGTATTGCTCTGGTCTTTCCCAATTTCCCTCAGT
CGCTGCTGCCTCAGGAAGACAAGGATTCTGATGAAGAGGACGATGAAGAGGATAATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGATGAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCTCTCCTGTAGTTCCTCCTACCATCTCACCCGCCAAGCCAAAGGGCAAATCACCTAAGGCTGCATCTCCCAAAAATCCATCTCCTGAGGTATTTAAAGATGT
CAATTTTCAGGAACGGATGGAGATCATGAAGAAAAGAGATTTCCTCAATGAGAAGGGATTCTCTAATAAAGCAGGAGCACTGCCAGAGTTCGTGAGTAGGATCATTTCGC
AGTACAAATGGCAGGACTTCTGTGCTCACCCTCAGGAGGCTATTGTGTCTCTAGTTCTTGAATTTTATGCCAGCCTGAGGGAAGATGGTCAGAACTCTTCGGCCAAACAG
ATGAAAGATGCATTGAAGCTTGTGGCCAACAAGGGGGTTCAGTGGAAAGAATCACAGACGAAAGTGAAGTCTTTGGTGCCAAGCGATCTAAAGCCAGAATCGGCAGTTTG
GCTTCACTTCATCAAAAACCGTTTGATGCCAACCACCCACGACAACACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCATTATGAAGGGATCGTTCCAGGCAAGGA
CGAGAAGCGTCACTTCTTCAAGACCGACCATTGACCTGTCCTTGATTGGAAAGCTCCAACAAAACAGTATCCAGAGAAAAGACAAAGCCTCTACATCTCAGGCTACTCCT
CAATCAGGGCCGAATGTAGCTTCTCCATCCCAACACACTCCTTTCACAGGGCCTTCACCATCATCGGAAGCCCTAGCCATTGCCTACCGCCATGTAGATCAAATCAGGGA
GAACATGAAAACATATTGGGCATATGCAAAAGAGAGGGATGAAGCCATTAGAGAGTTCTATCTCTCTACCGCCCCAAGTATTGCTCTGGTCTTTCCCAATTTCCCTCAGT
CGCTGCTGCCTCAGGAAGACAAGGATTCTGATGAAGAGGACGATGAAGAGGATAATGAGAATGATGAAGAAGAGAATGAAGAGAAAGAGAGTTCCTCAGATGAGGACTAG
Protein sequenceShow/hide protein sequence
MDASPVVPPTISPAKPKGKSPKAASPKNPSPEVFKDVNFQERMEIMKKRDFLNEKGFSNKAGALPEFVSRIISQYKWQDFCAHPQEAIVSLVLEFYASLREDGQNSSAKQ
MKDALKLVANKGVQWKESQTKVKSLVPSDLKPESAVWLHFIKNRLMPTTHDNTISVDRVMLLYCIMKGSFQARTRSVTSSRPTIDLSLIGKLQQNSIQRKDKASTSQATP
QSGPNVASPSQHTPFTGPSPSSEALAIAYRHVDQIRENMKTYWAYAKERDEAIREFYLSTAPSIALVFPNFPQSLLPQEDKDSDEEDDEEDNENDEEENEEKESSSDED