; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030499 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030499
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationscaffold6:31387167..31389606
RNA-Seq ExpressionSpg030499
SyntenySpg030499
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]3.8e-2241.3Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I ++ ++  C P D I Y +  HG+N+SYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
           ASID   +C+PVISVDG ++KNK+ GT ++A T +
Subjt:  ---ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

KAA0061274.1 uncharacterized protein E6C27_scaffold455G001170 [Cucumis melo var. makuwa]5.0e-2240.97Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I ++ ++  C P D I Y +  HG+NISYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+ VISVDG ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]1.1e-2139.58Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I ++ ++  C P + I Y +  H +N+SYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

TYK21259.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]5.5e-2140.28Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I +  ++  C P D I Y +  HG NISYDKAWRG E  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+PVISV+G ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]5.9e-2341.67Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I +  ++  C P D I Y +  HG+NISYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

TrEMBL top hitse value%identityAlignment
A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like1.8e-2241.3Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I ++ ++  C P D I Y +  HG+N+SYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
           ASID   +C+PVISVDG ++KNK+ GT ++A T +
Subjt:  ---ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

A0A5A7V1Z6 CCHC-type domain-containing protein2.4e-2240.97Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I ++ ++  C P D I Y +  HG+NISYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+ VISVDG ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

A0A5A7VAU3 MuDRA-like transposase5.4e-2239.58Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I ++ ++  C P + I Y +  H +N+SYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

A0A5D3DDB9 Protein FAR1-RELATED SEQUENCE 42.7e-2140.28Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I +  ++  C P D I Y +  HG NISYDKAWRG E  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+PVISV+G ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

A0A5D3E198 MuDRA-like transposase2.9e-2341.67Show/hide
Query:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------
        D+V     QAT+ +  E  K I +  ++  C P D I Y +  HG+NISYDKAWRGRE  LN +RG+ E+SYA +  F+  L+  NP             
Subjt:  DIVPVSEGQATTNVACEYAKTIMRITNRKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNP-------------

Query:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE
                 ASID   +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  ---------ASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGACATCAAATTACGATTTTGTTCAGTGGTGTTTGGGACGTGGCGAGACTCTACAGTGGTTTCAAGTCTGGTGTTGTGACGTGTCCTTGTGATGCTAACCTCTC
TCAACTCAAGGGATTGTTGTGTGGTTGTGGACGTGCAGAGGATAGATACTGCTATACACAACGGGGGGCAGTCGCAAGCTCATCCCGAGGGGAGACAAATTTTGAGTTTG
TTAACTCAGATGGGATTGACGTGTTGACCGACATAGTACCTGTATCAGAGGGGCAAGCGACAACGAATGTTGCGTGTGAGTATGCGAAGACTATAATGAGGATCACTAAC
AGGAAGCACTGTACACCTCAGGACACAATAAAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGACGTTAAATGAGTT
GAGAGGATCTTCTGAAGAGTCTTATGCGCAAATTCCAACGTTTGCAGCTAGGTTGATGGAAAGAAATCCAGCATCCATAGACGAGTGCAAACACTGTCTCCCGGTTATTT
CTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACTGCCTGCACATTTGAGTGTATGATGACCGCAAAGTGCACAGGCCGCAAGCCCGGAATAGGG
ACAGCGTCGCGACGCTGTGACGTCACTCGACTTGCCCTGCAAGAAATGGGACAGCGTCTCGATGCTGTGAGGTTTCCAGAACTTCCATGCGCGGGCTGGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGGACATCAAATTACGATTTTGTTCAGTGGTGTTTGGGACGTGGCGAGACTCTACAGTGGTTTCAAGTCTGGTGTTGTGACGTGTCCTTGTGATGCTAACCTCTC
TCAACTCAAGGGATTGTTGTGTGGTTGTGGACGTGCAGAGGATAGATACTGCTATACACAACGGGGGGCAGTCGCAAGCTCATCCCGAGGGGAGACAAATTTTGAGTTTG
TTAACTCAGATGGGATTGACGTGTTGACCGACATAGTACCTGTATCAGAGGGGCAAGCGACAACGAATGTTGCGTGTGAGTATGCGAAGACTATAATGAGGATCACTAAC
AGGAAGCACTGTACACCTCAGGACACAATAAAGTATGCTAGGAAAACGCACGGGATCAATATTAGTTATGACAAAGCATGGAGGGGTAGAGAAAAGACGTTAAATGAGTT
GAGAGGATCTTCTGAAGAGTCTTATGCGCAAATTCCAACGTTTGCAGCTAGGTTGATGGAAAGAAATCCAGCATCCATAGACGAGTGCAAACACTGTCTCCCGGTTATTT
CTGTAGATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACTGCCTGCACATTTGAGTGTATGATGACCGCAAAGTGCACAGGCCGCAAGCCCGGAATAGGG
ACAGCGTCGCGACGCTGTGACGTCACTCGACTTGCCCTGCAAGAAATGGGACAGCGTCTCGATGCTGTGAGGTTTCCAGAACTTCCATGCGCGGGCTGGGCTTGA
Protein sequenceShow/hide protein sequence
MAGHQITILFSGVWDVARLYSGFKSGVVTCPCDANLSQLKGLLCGCGRAEDRYCYTQRGAVASSSRGETNFEFVNSDGIDVLTDIVPVSEGQATTNVACEYAKTIMRITN
RKHCTPQDTIKYARKTHGINISYDKAWRGREKTLNELRGSSEESYAQIPTFAARLMERNPASIDECKHCLPVISVDGTSLKNKFSGTLLTACTFECMMTAKCTGRKPGIG
TASRRCDVTRLALQEMGQRLDAVRFPELPCAGWA