; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030500 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030500
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:33846559..33849283
RNA-Seq ExpressionSpg030500
SyntenySpg030500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]6.8e-1132Show/hide
Query:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-
        V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V + GA+W +S     T   + L   A     F++  LLPTTH  TVS+DR+ 
Subjt:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-

Query:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQE
                                     G LFFP+ IT LCR    P   ++  L + G ID   +AR+  TQE
Subjt:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]4.3e-2129.48Show/hide
Query:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-
        V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V   GA+W +S     T   + L   A     F++ RLLPTTH  TVS+DR+ 
Subjt:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-

Query:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR---TQEVRQ---------------GGLI
                                     G LFFP+ IT LCR    P   ++  L + G ID   +AR+ +   T+  +Q               G ++
Subjt:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR---TQEVRQ---------------GGLI

Query:  YGINTILEQLALLANRQ-------EFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL
          +  + ++L+    +Q       +   +Q   FW Y K RD  LK+ALQ NF++P P  P FP+++L
Subjt:  YGINTILEQLALLANRQ-------EFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.2e-1030.69Show/hide
Query:  FIRLRLLPTTHDSTVSRDRV------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR-------
        F++ RLLPTTH  TVS+DR+                              G LFFP+ IT LCR    P   ++  L   G ID   +AR+ +       
Subjt:  FIRLRLLPTTHDSTVSRDRV------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR-------

Query:  ----TQEVRQGGLIYGINTILEQLALLANR--------------QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL
            T              IL+QL  L  R               +   +Q   FW Y K RD  LK+ALQ NF++P P  P FP++LL
Subjt:  ----TQEVRQGGLIYGINTILEQLALLANR--------------QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]8.6e-2232.05Show/hide
Query:  VIVRGIPVDWSPEAVNDLFNLQD--FPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDR
        + VRG+ V WS EA+N +F L D    H+ F E +  P   +L   ++ V   GA+W +S     T   + L   A     F++ RLLPTTH   VS+DR
Subjt:  VIVRGIPVDWSPEAVNDLFNLQD--FPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDR

Query:  V------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL------QRTQEVRQGGLIYGINT-----
        +                              G LFFP+ IT LCR      +E+   L + G ID   +AR+      + TQ+          ++     
Subjt:  V------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL------QRTQEVRQGGLIYGINT-----

Query:  ILEQLALLANR---QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL
        +L+QL  L  R   QE   +Q   FW Y K RD  LK+ALQ NF++P P  P FP+++L
Subjt:  ILEQLALLANR---QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]1.4e-1127.35Show/hide
Query:  VRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRL-SKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV--
        VRG+ V    +A+N L  L       F  +  + S  +L    +E+G  G +W   S    RT++A+ LK  AN  + FIR  L PTTHDS++S +++  
Subjt:  VRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRL-SKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV--

Query:  ----------------------------GKLFFPNTITVLCRRVGVPESEDDIIL---PDKGIIDTPNLARLQRTQEVRQGGLIYGINTILEQ-LALLAN
                                    GKLFFP+ I  L  + GVPE  DD+++    +K  ID   +++L+   E  +G  + G+   +E+ L    +
Subjt:  ----------------------------GKLFFPNTITVLCRRVGVPESEDDIIL---PDKGIIDTPNLARLQRTQEVRQGGLIYGINTILEQ-LALLAN

Query:  RQEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDL
          +F   Q       +K   A L   L+ +  K      +  EDL
Subjt:  RQEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.3e-1132Show/hide
Query:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-
        V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V + GA+W +S     T   + L   A     F++  LLPTTH  TVS+DR+ 
Subjt:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-

Query:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQE
                                     G LFFP+ IT LCR    P   ++  L + G ID   +AR+  TQE
Subjt:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.1e-2129.48Show/hide
Query:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-
        V VRG+ V WS EA+N +F L D P    +E +   +   L   ++ V   GA+W +S     T   + L   A     F++ RLLPTTH  TVS+DR+ 
Subjt:  VIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRV-

Query:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR---TQEVRQ---------------GGLI
                                     G LFFP+ IT LCR    P   ++  L + G ID   +AR+ +   T+  +Q               G ++
Subjt:  -----------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR---TQEVRQ---------------GGLI

Query:  YGINTILEQLALLANRQ-------EFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL
          +  + ++L+    +Q       +   +Q   FW Y K RD  LK+ALQ NF++P P  P FP+++L
Subjt:  YGINTILEQLALLANRQ-------EFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL

A0A2P5CEY2 Uncharacterized protein5.6e-1130.69Show/hide
Query:  FIRLRLLPTTHDSTVSRDRV------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR-------
        F++ RLLPTTH  TVS+DR+                              G LFFP+ IT LCR    P   ++  L   G ID   +AR+ +       
Subjt:  FIRLRLLPTTHDSTVSRDRV------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARLQR-------

Query:  ----TQEVRQGGLIYGINTILEQLALLANR--------------QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL
            T              IL+QL  L  R               +   +Q   FW Y K RD  LK+ALQ NF++P P  P FP++LL
Subjt:  ----TQEVRQGGLIYGINTILEQLALLANR--------------QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL

A0A2P5CPE8 Uncharacterized protein1.6e-1030.81Show/hide
Query:  DDVIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDR
        D V VRG+ V  S EA+N ++ L D P    +E + A +  +L   ++ V I GA+W +S     T   + L   A     F++ RLLPTTH  TVS++R
Subjt:  DDVIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDR

Query:  V------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL
        V                              G LFFP+ IT +C     P   ++  L + G ID   +AR+
Subjt:  V------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL

A0A2P5DXM3 Uncharacterized protein4.2e-2232.05Show/hide
Query:  VIVRGIPVDWSPEAVNDLFNLQD--FPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDR
        + VRG+ V WS EA+N +F L D    H+ F E +  P   +L   ++ V   GA+W +S     T   + L   A     F++ RLLPTTH   VS+DR
Subjt:  VIVRGIPVDWSPEAVNDLFNLQD--FPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDR

Query:  V------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL------QRTQEVRQGGLIYGINT-----
        +                              G LFFP+ IT LCR      +E+   L + G ID   +AR+      + TQ+          ++     
Subjt:  V------------------------------GKLFFPNTITVLCRRVGVPESEDDIILPDKGIIDTPNLARL------QRTQEVRQGGLIYGINT-----

Query:  ILEQLALLANR---QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL
        +L+QL  L  R   QE   +Q   FW Y K RD  LK+ALQ NF++P P  P FP+++L
Subjt:  ILEQLALLANR---QEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGAAAAATCAAGAAAGAGAGGTTGACGAAGGGCGAGACGAACAGGCCGCGGTTGTGCTTGAAGAACAGGAACTGGTGCAGGAGAAGGGAACAAAAAAAGAAGAA
GGTTGAAGACAGAGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAAGAAATTTTGCCCAAGTGGAGGGAAGACAAGGGCAAAGGTATTACTGAGGCATCAGGGGCGGCTG
ACGAGGTTGAAGAACGAGGATTACCTTTTATTCGCTCTGTCAACCACCTTGCTCGAGCAAAATACCAAGAGATGCTGAAATGGGACTTCCTGTTCGAACGAGGATTTGGC
GATGATGTTATAGTTCGAGGAATACCCGTGGACTGGAGCCCAGAAGCCGTGAATGATTTGTTCAATCTCCAAGATTTTCCGCATGCGACCTTTAATGAGATGATGGTTGC
ACCATCTAGCGACCAACTGAATGCGGCGATCCAAGAGGTTGGCATTGAGGGGGCCCAGTGGAGGTTGTCGAAGACGGAGAAGCGCACGTTTCAGGCTGCTTATTTGAAAA
GCGAGGCCAACACCTTGATGGGTTTTATTAGGCTGCGCTTACTGCCGACAACGCACGACTCCACAGTATCTCGGGACCGGGTGGGGAAGTTGTTTTTCCCCAACACTATC
ACGGTGCTATGCCGGAGGGTAGGGGTACCAGAGAGTGAAGATGATATAATTTTACCGGATAAGGGAATCATTGATACACCCAATTTGGCACGACTCCAGCGTACGCAGGA
GGTACGACAAGGAGGGCTTATCTATGGCATTAACACGATTCTAGAACAACTGGCACTTTTGGCCAACAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGACCT
ATGTTAAGAATCGTGATGCTGGTTTGAAGAGGGCGCTGCAAGAAAATTTTTCAAAACCATATCCAGCCCTTCCTGAATTCCCCGAGGACCTACTGAGCCCCTGGATTCCA
CCGCCGCCTGTTGAGAAGGAAGATGAAGAAGAAGACTTGGCTTGGACTGTTTACGCCTTAATTAGATCAAGCCTAGTTGGTGATGAGCTTGAGGCAAGGGTATACTGCAC
TATAAAGTGGGTCATCCCATGCTTAAGAGCTTATGATTCAAAGCTTGGTTTTGCAGAGTGCTCAGGTAAAGGTCTAAGCAAACTTTGTGCTGCAACAAAGATGGGAGCAA
AACTGTCACGTCACAGTTCATTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTCGTGATAAAGGAGCACGGAAAGCCTTACACGTGTCCAGGTTGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGAAAAATCAAGAAAGAGAGGTTGACGAAGGGCGAGACGAACAGGCCGCGGTTGTGCTTGAAGAACAGGAACTGGTGCAGGAGAAGGGAACAAAAAAAGAAGAA
GGTTGAAGACAGAGCAAGAGAAGAAGAAGCAAAGAAGGCTGAGGAAGAAATTTTGCCCAAGTGGAGGGAAGACAAGGGCAAAGGTATTACTGAGGCATCAGGGGCGGCTG
ACGAGGTTGAAGAACGAGGATTACCTTTTATTCGCTCTGTCAACCACCTTGCTCGAGCAAAATACCAAGAGATGCTGAAATGGGACTTCCTGTTCGAACGAGGATTTGGC
GATGATGTTATAGTTCGAGGAATACCCGTGGACTGGAGCCCAGAAGCCGTGAATGATTTGTTCAATCTCCAAGATTTTCCGCATGCGACCTTTAATGAGATGATGGTTGC
ACCATCTAGCGACCAACTGAATGCGGCGATCCAAGAGGTTGGCATTGAGGGGGCCCAGTGGAGGTTGTCGAAGACGGAGAAGCGCACGTTTCAGGCTGCTTATTTGAAAA
GCGAGGCCAACACCTTGATGGGTTTTATTAGGCTGCGCTTACTGCCGACAACGCACGACTCCACAGTATCTCGGGACCGGGTGGGGAAGTTGTTTTTCCCCAACACTATC
ACGGTGCTATGCCGGAGGGTAGGGGTACCAGAGAGTGAAGATGATATAATTTTACCGGATAAGGGAATCATTGATACACCCAATTTGGCACGACTCCAGCGTACGCAGGA
GGTACGACAAGGAGGGCTTATCTATGGCATTAACACGATTCTAGAACAACTGGCACTTTTGGCCAACAGGCAGGAGTTTGCTGAAAGGCAAACTTTAACCTTCTGGACCT
ATGTTAAGAATCGTGATGCTGGTTTGAAGAGGGCGCTGCAAGAAAATTTTTCAAAACCATATCCAGCCCTTCCTGAATTCCCCGAGGACCTACTGAGCCCCTGGATTCCA
CCGCCGCCTGTTGAGAAGGAAGATGAAGAAGAAGACTTGGCTTGGACTGTTTACGCCTTAATTAGATCAAGCCTAGTTGGTGATGAGCTTGAGGCAAGGGTATACTGCAC
TATAAAGTGGGTCATCCCATGCTTAAGAGCTTATGATTCAAAGCTTGGTTTTGCAGAGTGCTCAGGTAAAGGTCTAAGCAAACTTTGTGCTGCAACAAAGATGGGAGCAA
AACTGTCACGTCACAGTTCATTAGCCAACTTCATGAACCGACTTCTGTTGAGTTATTTTCGTGATAAAGGAGCACGGAAAGCCTTACACGTGTCCAGGTTGACCTAA
Protein sequenceShow/hide protein sequence
MLRKIKKERLTKGETNRPRLCLKNRNWCRRREQKKKKVEDRAREEEAKKAEEEILPKWREDKGKGITEASGAADEVEERGLPFIRSVNHLARAKYQEMLKWDFLFERGFG
DDVIVRGIPVDWSPEAVNDLFNLQDFPHATFNEMMVAPSSDQLNAAIQEVGIEGAQWRLSKTEKRTFQAAYLKSEANTLMGFIRLRLLPTTHDSTVSRDRVGKLFFPNTI
TVLCRRVGVPESEDDIILPDKGIIDTPNLARLQRTQEVRQGGLIYGINTILEQLALLANRQEFAERQTLTFWTYVKNRDAGLKRALQENFSKPYPALPEFPEDLLSPWIP
PPPVEKEDEEEDLAWTVYALIRSSLVGDELEARVYCTIKWVIPCLRAYDSKLGFAECSGKGLSKLCAATKMGAKLSRHSSLANFMNRLLLSYFRDKGARKALHVSRLT