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Spg030526 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030526
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:34209209..34210728
RNA-Seq ExpressionSpg030526
SyntenySpg030526
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA03191.1 hypothetical protein BVC80_457g1 [Macleaya cordata]1.2e-0637.93Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFG
        MGN  +  FWED W+G   LC  FP LY  SS K  SV    N  G +L ++ G  R L D E  +  TL+  +     S     FG
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFG

TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]3.2e-0952.17Show/hide
Query:  GERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRR
        GER LC  FP LYHLSS+KN  +   L  +G+S S+SFGF+R LSDRET +++ L+SL+   +F   RR
Subjt:  GERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRR

VVA30963.1 Hypothetical predicted protein, partial [Prunus dulcis]8.8e-0738.55Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASR
        +GN +   FWED W+ E  L   FPRL  LS  KNQS+ +  N     L++ F F+R LS+ E  +++ LL ++G +    SR
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASR

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]3.2e-0938.3Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFGCGVLNPL
        +G+  + YFWED W+G + L + FPR+Y LS  K  SV +VLN      S S G  R L+D E+ ++  LL L+  ++ S+ R      + NPL
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFGCGVLNPL

XP_026410707.1 uncharacterized protein LOC113305930 [Papaver somniferum]1.0e-0739.47Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGE
        +GN +  YFW D WVGE+SL V FP L+HLS  KN  +  +++  G   ++   F R L++ E  +++ LL++IG+
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGE

TrEMBL top hitse value%identityAlignment
A0A200PYB7 Uncharacterized protein5.6e-0737.93Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFG
        MGN  +  FWED W+G   LC  FP LY  SS K  SV    N  G +L ++ G  R L D E  +  TL+  +     S     FG
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFG

A0A438DVI5 Putative ribonuclease H protein7.3e-0742.68Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSAS
        +GN +   FWED W G ++LC  F  LY + SMKN +V  VL  S   LS++F F+R L+D E   L  L+S +  + FS S
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSAS

A0A5D3CI74 Calpain-type cysteine protease DEK11.6e-0952.17Show/hide
Query:  GERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRR
        GER LC  FP LYHLSS+KN  +   L  +G+S S+SFGF+R LSDRET +++ L+SL+   +F   RR
Subjt:  GERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRR

A0A5E4FU33 zf-RVT domain-containing protein (Fragment)4.3e-0738.55Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASR
        +GN +   FWED W+ E  L   FPRL  LS  KNQS+ +  N     L++ F F+R LS+ E  +++ LL ++G +    SR
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASR

A0A6J1DFI2 uncharacterized protein LOC1110196241.6e-0938.3Show/hide
Query:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFGCGVLNPL
        +G+  + YFWED W+G + L + FPR+Y LS  K  SV +VLN      S S G  R L+D E+ ++  LL L+  ++ S+ R      + NPL
Subjt:  MGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETFDLLTLLSLIGEITFSASRRMFGCGVLNPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGACGAAAACCCAAGGAAGGGGACAACAAAAACTCAGAAGGAGAAAGGATCAAAGCAATCGAATGGTTCCTCAAATAGGACAACTGATATAAATGGGGAAATAAA
GAGTAATGGGGTCTATCCTCCCAGAATGGGGAATGAGGATGATACTTATTTTTGGGAAGATAGGTGGGTGGGAGAGCGATCCCTTTGTGTTACCTTTCCTCGGCTCTATC
ATTTATCTTCCATGAAAAATCAGTCCGTAGTCAAGGTCTTAAATCCTTCTGGGAGCTCTCTTTCCTATTCTTTTGGTTTTAAGCGCCCGTTGTCTGATCGAGAAACTTTC
GACCTTTTGACTCTCCTGTCCTTGATTGGGGAGATCACTTTTAGCGCTTCTAGGAGGATGTTCGGTTGTGGAGTCCTGAACCCTCTCTTGGTTTCTCTTCGTGTGATTTT
GGGCGTTTCCTCGATGGCATCCAAGAAGGTCTCAACCAGTGTGGGTGGAGACTCAACATCGATGGGCAAAGAGGCGGAGACTATCACCGTCCTCTCACCACAAGAAACGA
CTGCACGCTTGCTGTCAGTCGAAGATGACGTGCGTGAGATTAAAAAAAATCTTAGGGATGATATGCGAAAGAATGGGCTGCAAGATTGGACAGCAAGCCTCGAAATTTCA
AGAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGACGAAAACCCAAGGAAGGGGACAACAAAAACTCAGAAGGAGAAAGGATCAAAGCAATCGAATGGTTCCTCAAATAGGACAACTGATATAAATGGGGAAATAAA
GAGTAATGGGGTCTATCCTCCCAGAATGGGGAATGAGGATGATACTTATTTTTGGGAAGATAGGTGGGTGGGAGAGCGATCCCTTTGTGTTACCTTTCCTCGGCTCTATC
ATTTATCTTCCATGAAAAATCAGTCCGTAGTCAAGGTCTTAAATCCTTCTGGGAGCTCTCTTTCCTATTCTTTTGGTTTTAAGCGCCCGTTGTCTGATCGAGAAACTTTC
GACCTTTTGACTCTCCTGTCCTTGATTGGGGAGATCACTTTTAGCGCTTCTAGGAGGATGTTCGGTTGTGGAGTCCTGAACCCTCTCTTGGTTTCTCTTCGTGTGATTTT
GGGCGTTTCCTCGATGGCATCCAAGAAGGTCTCAACCAGTGTGGGTGGAGACTCAACATCGATGGGCAAAGAGGCGGAGACTATCACCGTCCTCTCACCACAAGAAACGA
CTGCACGCTTGCTGTCAGTCGAAGATGACGTGCGTGAGATTAAAAAAAATCTTAGGGATGATATGCGAAAGAATGGGCTGCAAGATTGGACAGCAAGCCTCGAAATTTCA
AGAACATGA
Protein sequenceShow/hide protein sequence
MNDENPRKGTTKTQKEKGSKQSNGSSNRTTDINGEIKSNGVYPPRMGNEDDTYFWEDRWVGERSLCVTFPRLYHLSSMKNQSVVKVLNPSGSSLSYSFGFKRPLSDRETF
DLLTLLSLIGEITFSASRRMFGCGVLNPLLVSLRVILGVSSMASKKVSTSVGGDSTSMGKEAETITVLSPQETTARLLSVEDDVREIKKNLRDDMRKNGLQDWTASLEIS
RT