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Spg030544 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030544
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold6:31246929..31248473
RNA-Seq ExpressionSpg030544
SyntenySpg030544
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.6e-0842.31Show/hide
Query:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLY
        N  G+ +  NP A+ +++AL+ +   G +W    T+   L P+DL  E ++WL FIK  +MPT HDSTIS++ +MLLY
Subjt:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLY

KAA0048500.1 protein MNN4-like [Cucumis melo var. makuwa]1.8e-0946.05Show/hide
Query:  VIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK
        + + PS   M+ AL+ VA  G++W  +  K   L P +LK  +++WL FIK  LMPT HD+TIS++R+MLLYC+M+
Subjt:  VIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK

KGN54872.1 hypothetical protein Csa_012255 [Cucumis sativus]2.4e-0942.68Show/hide
Query:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK
        N  G+D+++NP A+ ++ ALK V         + T    L+P +L  E+ IWL F+K ++MPT HD+ IS++RVML+YC+MK
Subjt:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK

XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]7.5e-1126.22Show/hide
Query:  VTRISEQFVTIHYLRVLRHKTQDKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDR
        +TR+SE  V   Y  +  ++  +   +  RGN+++ +PS +Q++EA +L+      W  S     SL P D+  ++T+W++ +KNRL+PT++DS+I  +R
Subjt:  VTRISEQFVTIHYLRVLRHKTQDKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDR

Query:  VMLLYCLMKGQAFLW---ITHHPALSKVKIVPGKDEERHFFKPTIDLSLIGKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFIGPSPASEALGMVH
         M++Y L+KG  F +   I +       K+   +  + +   P      + K++  SI R++ +  + A P                      E  G+V 
Subjt:  VMLLYCLMKGQAFLW---ITHHPALSKVKIVPGKDEERHFFKPTIDLSLIGKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFIGPSPASEALGMVH

Query:  R-QLDQIRENLKTYWVYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPEEEK-DSDEDEDEENDDE
        R Q D++R   +   V  +     +++ Y   APS    FP+   + LP   +  +D ++DE +DDE
Subjt:  R-QLDQIRENLKTYWVYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPEEEK-DSDEDEDEENDDE

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]9.7e-1141.25Show/hide
Query:  GNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMKG
        GN +I +P  ++M++AL+ +   G QW  S   +K+L  S L PE+ +W++ +K R++PT+HD T+S DRVM  YC+  G
Subjt:  GNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMKG

TrEMBL top hitse value%identityAlignment
A0A0A0L2P0 Uncharacterized protein1.2e-0942.68Show/hide
Query:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK
        N  G+D+++NP A+ ++ ALK V         + T    L+P +L  E+ IWL F+K ++MPT HD+ IS++RVML+YC+MK
Subjt:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK

A0A2P5DXM3 Uncharacterized protein2.9e-0823.6Show/hide
Query:  NDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMKGQAFLWITHHPALSKVKIVPGK
        ++ I N +  ++   L+ VA  G +W  S     + + S L P + +W HF+K+RL+PTTH   +S DR++LL+ ++ G++          S+++    +
Subjt:  NDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMKGQAFLWITHHPALSKVKIVPGK

Query:  DEERHFFKPTIDL------SLIGKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFIGPSPASEALGMVHRQLDQIRENL----------KTYWVYAK
             FF   I         L+ + + ++    D  + ++ T   GP  ++    +     + +S   G V +QL  + + L          + +W Y+K
Subjt:  DEERHFFKPTIDL------SLIGKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFIGPSPASEALGMVHRQLDQIRENL----------KTYWVYAK

Query:  ERDEAIREFYLSIAPSIAPVFPNFPQSLLPEEEKDSDEDEDEENDDEENE
        ERD A+++   +      P FP FPQ +L + + + + + D++  +E  E
Subjt:  ERDEAIREFYLSIAPSIAPVFPNFPQSLLPEEEKDSDEDEDEENDDEENE

A0A5A7TZE0 Protein MNN4-like8.9e-1046.05Show/hide
Query:  VIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK
        + + PS   M+ AL+ VA  G++W  +  K   L P +LK  +++WL FIK  LMPT HD+TIS++R+MLLYC+M+
Subjt:  VIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMK

A0A5D3CW17 Uncharacterized protein7.5e-0942.31Show/hide
Query:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLY
        N  G+ +  NP A+ +++AL+ +   G +W    T+   L P+DL  E ++WL FIK  +MPT HDSTIS++ +MLLY
Subjt:  NPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLY

A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220073.6e-1126.22Show/hide
Query:  VTRISEQFVTIHYLRVLRHKTQDKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDR
        +TR+SE  V   Y  +  ++  +   +  RGN+++ +PS +Q++EA +L+      W  S     SL P D+  ++T+W++ +KNRL+PT++DS+I  +R
Subjt:  VTRISEQFVTIHYLRVLRHKTQDKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDR

Query:  VMLLYCLMKGQAFLW---ITHHPALSKVKIVPGKDEERHFFKPTIDLSLIGKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFIGPSPASEALGMVH
         M++Y L+KG  F +   I +       K+   +  + +   P      + K++  SI R++ +  + A P                      E  G+V 
Subjt:  VMLLYCLMKGQAFLW---ITHHPALSKVKIVPGKDEERHFFKPTIDLSLIGKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFIGPSPASEALGMVH

Query:  R-QLDQIRENLKTYWVYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPEEEK-DSDEDEDEENDDE
        R Q D++R   +   V  +     +++ Y   APS    FP+   + LP   +  +D ++DE +DDE
Subjt:  R-QLDQIRENLKTYWVYAKERDEAIREFYLSIAPSIAPVFPNFPQSLLPEEEK-DSDEDEDEENDDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATCTGTTTATGATCCAATCAATAAACAGCAGTTCCTCTCGGGCCAGGAGAGGATGGGCGCCCTTGTTCAAGACCCGGAATCAGCCCTTAAGGGAACACACATC
TGTTTACCCCAATAGGGGAAGGAGTGAATTCCATCTTGTAATGTTATGTTCCCAGCCCCCACTTGGTCTTGCCCCTGAAATGGATACCCCCACCCGCATGTCTCCTACAT
GGATGCTTTGGATTATTGCATCTGTATCGAATACAAGATGGGTCGTATCACATAGTGTCACCAGGATAAGTGAACAATTTGTCACCATTCACTATCTACGAGTTTTAAGG
CATAAAACCCAAGACAAAGCACCCTTGAACCCGAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAAATGAAGGAAGCATTGAAACTTGTGGCCAACAAGGGGGT
TCAATGGAAAGAATCGCAGACAAAAGTGAAGTCTTTAGTGCCAAGTGACCTAAAGCCAGAATCGACAATTTGGCTTCACTTCATCAAAAACCGCTTGATGCCAACCACCC
ACGACAGCACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCCTTATGAAGGGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAAAGGTGAAGATCGTG
CCGGGCAAGGACGAAGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAGCAGAACAGTATCCAGAGGAAAGACAAAGCCTCTACATCTCA
GGCTACTCCACCTACAGGGCCGAACGTAGCCTCTCCATCCCAGCACACTCCTTTTATAGGGCCTTCACCAGCATCGGAAGCCCTTGGTATGGTCCACCGCCAGTTAGATC
AAATCAGGGAGAACCTGAAGACGTACTGGGTATATGCAAAGGAGAGGGATGAAGCTATTAGAGAGTTCTATCTCTCTATCGCCCCGAGTATCGCTCCGGTCTTTCCAAAT
TTCCCTCAGTCGCTGCTTCCTGAAGAAGAGAAGGATTCTGATGAAGATGAGGATGAAGAAAATGATGATGAAGAGAATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATA
G
mRNA sequenceShow/hide mRNA sequence
ATGAACAATCTGTTTATGATCCAATCAATAAACAGCAGTTCCTCTCGGGCCAGGAGAGGATGGGCGCCCTTGTTCAAGACCCGGAATCAGCCCTTAAGGGAACACACATC
TGTTTACCCCAATAGGGGAAGGAGTGAATTCCATCTTGTAATGTTATGTTCCCAGCCCCCACTTGGTCTTGCCCCTGAAATGGATACCCCCACCCGCATGTCTCCTACAT
GGATGCTTTGGATTATTGCATCTGTATCGAATACAAGATGGGTCGTATCACATAGTGTCACCAGGATAAGTGAACAATTTGTCACCATTCACTATCTACGAGTTTTAAGG
CATAAAACCCAAGACAAAGCACCCTTGAACCCGAGAGGGAATGATGTGATAAGGAACCCTTCGGCCAAGCAAATGAAGGAAGCATTGAAACTTGTGGCCAACAAGGGGGT
TCAATGGAAAGAATCGCAGACAAAAGTGAAGTCTTTAGTGCCAAGTGACCTAAAGCCAGAATCGACAATTTGGCTTCACTTCATCAAAAACCGCTTGATGCCAACCACCC
ACGACAGCACGATTTCAGTGGATAGAGTGATGCTACTCTATTGCCTTATGAAGGGGCAAGCTTTTCTTTGGATCACTCATCACCCAGCTTTGTCAAAGGTGAAGATCGTG
CCGGGCAAGGACGAAGAGCGTCACTTCTTCAAGCCGACCATTGACCTGTCCTTGATCGGGAAGCTCCAGCAGAACAGTATCCAGAGGAAAGACAAAGCCTCTACATCTCA
GGCTACTCCACCTACAGGGCCGAACGTAGCCTCTCCATCCCAGCACACTCCTTTTATAGGGCCTTCACCAGCATCGGAAGCCCTTGGTATGGTCCACCGCCAGTTAGATC
AAATCAGGGAGAACCTGAAGACGTACTGGGTATATGCAAAGGAGAGGGATGAAGCTATTAGAGAGTTCTATCTCTCTATCGCCCCGAGTATCGCTCCGGTCTTTCCAAAT
TTCCCTCAGTCGCTGCTTCCTGAAGAAGAGAAGGATTCTGATGAAGATGAGGATGAAGAAAATGATGATGAAGAGAATGAAGAGAAAGAGAGTTCCTCGGACGAGGAATA
G
Protein sequenceShow/hide protein sequence
MNNLFMIQSINSSSSRARRGWAPLFKTRNQPLREHTSVYPNRGRSEFHLVMLCSQPPLGLAPEMDTPTRMSPTWMLWIIASVSNTRWVVSHSVTRISEQFVTIHYLRVLR
HKTQDKAPLNPRGNDVIRNPSAKQMKEALKLVANKGVQWKESQTKVKSLVPSDLKPESTIWLHFIKNRLMPTTHDSTISVDRVMLLYCLMKGQAFLWITHHPALSKVKIV
PGKDEERHFFKPTIDLSLIGKLQQNSIQRKDKASTSQATPPTGPNVASPSQHTPFIGPSPASEALGMVHRQLDQIRENLKTYWVYAKERDEAIREFYLSIAPSIAPVFPN
FPQSLLPEEEKDSDEDEDEENDDEENEEKESSSDEE