; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030548 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030548
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:30601509..30602839
RNA-Seq ExpressionSpg030548
SyntenySpg030548
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]8.9e-1429.71Show/hide
Query:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN
        ++ +F ND A+A++     R   FE+          GFG D+   +    T   W +F   P SVN+++V+EFYANI     +   VRG  + ++  A N
Subjt:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN

Query:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII
          F+LQD    HA F E   +   D +                   +V RE                         VS  R+LL+ SI+ S  IDVG II
Subjt:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII

Query:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL
          +++ C  KK     FPN IT LC + +V  +  D IL
Subjt:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL

KAE8680640.1 hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]2.3e-1429.71Show/hide
Query:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN
        S+ +F +D A+A++    K+   FE+          GFG D+       +T   W +F   P SVN+++V+EFYANI         VRG  + ++P A  
Subjt:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN

Query:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII
          F+LQD    HA F E   + + D++                   +V RE                         VS  R+LL+ SI  S  IDVG+II
Subjt:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII

Query:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL
          ++  C  KK     FPN IT LC + +V  +  D IL
Subjt:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.0e-1731.84Show/hide
Query:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA
        GI     +A +A   E   +  R+ N++ + + L   K   L        LP F+   IT H W QFCA PE     +VREFYAN+ D       VRGV 
Subjt:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA

Query:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS
        V WS  A N++F L D    H+ F E +           VA +  + N   +                               + VS+DR+LL+ S+L  
Subjt:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS

Query:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARLQRTQE
         SI+VG++I +EI +C  +K G  FFP+ IT LC  A  P  + +  L + G ID   +AR+  TQE
Subjt:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARLQRTQE

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.2e-2329.01Show/hide
Query:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA
        GI     +A +A   E   +  R+ N++ + + L   K   L        LP F+   IT H W QFCA PE     +VREFYAN+ D E     VRGV 
Subjt:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA

Query:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS
        V WS  A N++F L D    H+ F + +           VA +  + N   +                               + VS+DR+LL+ S+L  
Subjt:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS

Query:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC-------------------------
         SI+VG++I +EI +C  +K G  FFP+ IT LC  A  P  + +  L + G ID   +AR+      + TQ+                           
Subjt:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC-------------------------

Query:  ---------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF
                             Q Q FW Y+K RD  L+KALQ+NF++P   FP F
Subjt:  ---------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.7e-1729.96Show/hide
Query:  IVREFYANIDDEEGFQAMVRGVAVDWSPGATNSLFNLQD--FPHAGFNEMVVAP------------------------------------------SNDQ
        +VREFYAN+ D E     VRGV V WS  A N++F L D    H+ F E +  P                                           +  
Subjt:  IVREFYANIDDEEGFQAMVRGVAVDWSPGATNSLFNLQD--FPHAGFNEMVVAP------------------------------------------SNDQ

Query:  LNAVVREVVSRDRVLLVFSILRSLSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC--
        L     ++VS+DR+LL+ S+L   SI+VG++I +EI +C  +K G  FFP+ IT LC  A  P  + +  L + G ID   +AR+      + TQ+    
Subjt:  LNAVVREVVSRDRVLLVFSILRSLSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC--

Query:  ---------------------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF
                                         Q Q FW Y+K RD  L+KALQ+NF++P   FP F
Subjt:  ---------------------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)4.9e-1831.84Show/hide
Query:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA
        GI     +A +A   E   +  R+ N++ + + L   K   L        LP F+   IT H W QFCA PE     +VREFYAN+ D       VRGV 
Subjt:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA

Query:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS
        V WS  A N++F L D    H+ F E +           VA +  + N   +                               + VS+DR+LL+ S+L  
Subjt:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS

Query:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARLQRTQE
         SI+VG++I +EI +C  +K G  FFP+ IT LC  A  P  + +  L + G ID   +AR+  TQE
Subjt:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARLQRTQE

A0A2P5BCG4 Uncharacterized protein (Fragment)6.0e-2429.01Show/hide
Query:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA
        GI     +A +A   E   +  R+ N++ + + L   K   L        LP F+   IT H W QFCA PE     +VREFYAN+ D E     VRGV 
Subjt:  GIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVA

Query:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS
        V WS  A N++F L D    H+ F + +           VA +  + N   +                               + VS+DR+LL+ S+L  
Subjt:  VDWSPGATNSLFNLQD--FPHAGFNEMV-----------VAPSNDQLNAVVR-------------------------------EVVSRDRVLLVFSILRS

Query:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC-------------------------
         SI+VG++I +EI +C  +K G  FFP+ IT LC  A  P  + +  L + G ID   +AR+      + TQ+                           
Subjt:  LSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC-------------------------

Query:  ---------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF
                             Q Q FW Y+K RD  L+KALQ+NF++P   FP F
Subjt:  ---------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF

A0A2P5DXM3 Uncharacterized protein8.4e-1829.96Show/hide
Query:  IVREFYANIDDEEGFQAMVRGVAVDWSPGATNSLFNLQD--FPHAGFNEMVVAP------------------------------------------SNDQ
        +VREFYAN+ D E     VRGV V WS  A N++F L D    H+ F E +  P                                           +  
Subjt:  IVREFYANIDDEEGFQAMVRGVAVDWSPGATNSLFNLQD--FPHAGFNEMVVAP------------------------------------------SNDQ

Query:  LNAVVREVVSRDRVLLVFSILRSLSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC--
        L     ++VS+DR+LL+ S+L   SI+VG++I +EI +C  +K G  FFP+ IT LC  A  P  + +  L + G ID   +AR+      + TQ+    
Subjt:  LNAVVREVVSRDRVLLVFSILRSLSIDVGKIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARL------QRTQEAC--

Query:  ---------------------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF
                                         Q Q FW Y+K RD  L+KALQ+NF++P   FP F
Subjt:  ---------------------------------QAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVF

A0A6A2WM54 Uncharacterized protein4.3e-1429.71Show/hide
Query:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN
        ++ +F ND A+A++     R   FE+          GFG D+   +    T   W +F   P SVN+++V+EFYANI     +   VRG  + ++  A N
Subjt:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN

Query:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII
          F+LQD    HA F E   +   D +                   +V RE                         VS  R+LL+ SI+ S  IDVG II
Subjt:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII

Query:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL
          +++ C  KK     FPN IT LC + +V  +  D IL
Subjt:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL

A0A6A2YMQ9 Uncharacterized protein1.1e-1429.71Show/hide
Query:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN
        S+ +F +D A+A++    K+   FE+          GFG D+       +T   W +F   P SVN+++V+EFYANI         VRG  + ++P A  
Subjt:  SYARFTNDLARAKYLEMLKRDFLFEM----------GFGDDLPHFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATN

Query:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII
          F+LQD    HA F E   + + D++                   +V RE                         VS  R+LL+ SI  S  IDVG+II
Subjt:  SLFNLQDF--PHAGFNEMVVAPSNDQL------------------NAVVRE------------------------VVSRDRVLLVFSILRSLSIDVGKII

Query:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL
          ++  C  KK     FPN IT LC + +V  +  D IL
Subjt:  SNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTCGGAACAAAGAAACGGTCAGGGAACCCAAGAGCAGCAGGTTCAGGCAGAGATTGTGTCGGAACCACAACGTCATCGCTGCGAGCAAAAGGCGGGACCAAGAGAA
AGAAGAGGCTGAGAAAAAGGTGGAAGAAGAAGCCCTGACGAAGCAACAAGAAGACAGGGGCAAAGGAATTGCTGAAGCAACGATCGAAGCAGAGGAGGCTGAAGATGAGG
AGCAGAGAATGTCGTATGCGCGCTTCACCAACGATCTTGCCAGAGCAAAATATCTGGAAATGCTGAAGAGGGACTTCTTGTTTGAAATGGGATTCGGTGATGACTTGCCT
CATTTCTTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTCTGCGCGAAACCAGAATCGGTTAACTCAAATATTGTCCGCGAATTCTACGCGAACATAGATGACGA
GGAAGGGTTTCAAGCCATGGTCCGAGGGGTAGCTGTCGATTGGAGCCCAGGGGCGACAAATTCTCTATTCAATCTCCAAGACTTTCCACATGCCGGATTTAATGAGATGG
TGGTGGCACCTTCTAATGATCAATTGAATGCTGTGGTCAGAGAGGTTGTATCCAGAGATAGAGTGCTTCTGGTGTTTTCCATTCTGAGATCCTTGAGTATAGATGTTGGT
AAGATAATTTCTAATGAAATTTACAGTTGTTGGCGTAAGAAGGTGGGAAAACAGTTCTTCCCAAACACGATTACCATGCTGTGTAGTAGGGCAGAAGTGCCCACAAGTCT
GGAGGATGTTATTCTACTTGATAAGGGGATTATAGATACGCCCAATTTGGCTCGGCTTCAGCGCACGCAGGAGGCATGCCAAGCTCAGACCTTCTGGACCTATGCTAAGA
GGAGGGATGCCACCCTAAGGAAGGCCCTGCAATCCAATTTTTCAAAACCATACCAAGCCTTCCCTGTTTTCCTCGATGTTTTGTTTAATCCCTGGATTCCGCCGCCGCCA
GTAGAAAGAGAGGAAGAGGAGGAAGATGAGCAAGGTCAGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTCGGAACAAAGAAACGGTCAGGGAACCCAAGAGCAGCAGGTTCAGGCAGAGATTGTGTCGGAACCACAACGTCATCGCTGCGAGCAAAAGGCGGGACCAAGAGAA
AGAAGAGGCTGAGAAAAAGGTGGAAGAAGAAGCCCTGACGAAGCAACAAGAAGACAGGGGCAAAGGAATTGCTGAAGCAACGATCGAAGCAGAGGAGGCTGAAGATGAGG
AGCAGAGAATGTCGTATGCGCGCTTCACCAACGATCTTGCCAGAGCAAAATATCTGGAAATGCTGAAGAGGGACTTCTTGTTTGAAATGGGATTCGGTGATGACTTGCCT
CATTTCTTACGTGCTGGGATTACAAACCACGGATGGGATCAGTTCTGCGCGAAACCAGAATCGGTTAACTCAAATATTGTCCGCGAATTCTACGCGAACATAGATGACGA
GGAAGGGTTTCAAGCCATGGTCCGAGGGGTAGCTGTCGATTGGAGCCCAGGGGCGACAAATTCTCTATTCAATCTCCAAGACTTTCCACATGCCGGATTTAATGAGATGG
TGGTGGCACCTTCTAATGATCAATTGAATGCTGTGGTCAGAGAGGTTGTATCCAGAGATAGAGTGCTTCTGGTGTTTTCCATTCTGAGATCCTTGAGTATAGATGTTGGT
AAGATAATTTCTAATGAAATTTACAGTTGTTGGCGTAAGAAGGTGGGAAAACAGTTCTTCCCAAACACGATTACCATGCTGTGTAGTAGGGCAGAAGTGCCCACAAGTCT
GGAGGATGTTATTCTACTTGATAAGGGGATTATAGATACGCCCAATTTGGCTCGGCTTCAGCGCACGCAGGAGGCATGCCAAGCTCAGACCTTCTGGACCTATGCTAAGA
GGAGGGATGCCACCCTAAGGAAGGCCCTGCAATCCAATTTTTCAAAACCATACCAAGCCTTCCCTGTTTTCCTCGATGTTTTGTTTAATCCCTGGATTCCGCCGCCGCCA
GTAGAAAGAGAGGAAGAGGAGGAAGATGAGCAAGGTCAGGAGGATTGA
Protein sequenceShow/hide protein sequence
MCRNKETVREPKSSRFRQRLCRNHNVIAASKRRDQEKEEAEKKVEEEALTKQQEDRGKGIAEATIEAEEAEDEEQRMSYARFTNDLARAKYLEMLKRDFLFEMGFGDDLP
HFLRAGITNHGWDQFCAKPESVNSNIVREFYANIDDEEGFQAMVRGVAVDWSPGATNSLFNLQDFPHAGFNEMVVAPSNDQLNAVVREVVSRDRVLLVFSILRSLSIDVG
KIISNEIYSCWRKKVGKQFFPNTITMLCSRAEVPTSLEDVILLDKGIIDTPNLARLQRTQEACQAQTFWTYAKRRDATLRKALQSNFSKPYQAFPVFLDVLFNPWIPPPP
VEREEEEEDEQGQED