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Spg030554 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030554
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein
Genome locationscaffold6:30059682..30060845
RNA-Seq ExpressionSpg030554
SyntenySpg030554
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064831.1 F-box protein [Cucumis melo var. makuwa]1.9e-0760Show/hide
Query:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        D++ +FIG LK KVF TIST+IT   + H+L EVVEEHL ME LV R +GG G+V
Subjt:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

XP_004150662.2 F-box protein At1g22220 isoform X1 [Cucumis sativus]1.6e-0660Show/hide
Query:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        D   +FIG LK KVF TISTVIT   + H+L EVVEEHL ME L  R +GG G+V
Subjt:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

XP_008445343.1 PREDICTED: F-box protein At1g22220 [Cucumis melo]1.9e-0760Show/hide
Query:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        D++ +FIG LK KVF TIST+IT   + H+L EVVEEHL ME LV R +GG G+V
Subjt:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

XP_023002829.1 F-box protein At1g78100-like [Cucurbita maxima]1.2e-0657.38Show/hide
Query:  AMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        A+A GFD    FI ELK KVF TIST+IT   + H+LAE++EEHL ME LV R + G G+V
Subjt:  AMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

XP_038886087.1 F-box protein At1g22220 [Benincasa hispida]4.9e-0853.73Show/hide
Query:  GAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQSVN
        G + +  D  F+FIG LK KVF TIST+IT   + H+LAEVV EHL ME LV R +GG G+V    N
Subjt:  GAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQSVN

TrEMBL top hitse value%identityAlignment
A0A0A0LN04 F-box domain-containing protein7.7e-0760Show/hide
Query:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        D   +FIG LK KVF TISTVIT   + H+L EVVEEHL ME L  R +GG G+V
Subjt:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

A0A1S3BC00 F-box protein At1g222209.1e-0860Show/hide
Query:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        D++ +FIG LK KVF TIST+IT   + H+L EVVEEHL ME LV R +GG G+V
Subjt:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

A0A5A7VGI7 F-box protein9.1e-0860Show/hide
Query:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        D++ +FIG LK KVF TIST+IT   + H+L EVVEEHL ME LV R +GG G+V
Subjt:  DFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

A0A6J1GI01 F-box protein At1g22220-like1.7e-0655.74Show/hide
Query:  AMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        A+A GFD    FI ELK KVF TIST+IT   + H+LAEV+EEHL ++ LV R + G G+V
Subjt:  AMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

A0A6J1KRK0 F-box protein At1g78100-like5.9e-0757.38Show/hide
Query:  AMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV
        A+A GFD    FI ELK KVF TIST+IT   + H+LAE++EEHL ME LV R + G G+V
Subjt:  AMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIV

SwissProt top hitse value%identityAlignment
Q9C534 F-box protein At1g302006.9e-0530.56Show/hide
Query:  NTIRDNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS
        N++ ++ G +   F  +    G LKL+V WTIS++I    + ++L  ++ EH  ++RLV     G G++C +
Subjt:  NTIRDNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS

Q9FNK5 F-box protein At5g461701.0e-0330.88Show/hide
Query:  DNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS
        D+ G++   F  +    G LKL+V WTIS++I    + ++L  ++ EH  ++ LV     G G++C +
Subjt:  DNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS

Arabidopsis top hitse value%identityAlignment
AT1G30200.1 F-box family protein4.9e-0630.56Show/hide
Query:  NTIRDNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS
        N++ ++ G +   F  +    G LKL+V WTIS++I    + ++L  ++ EH  ++RLV     G G++C +
Subjt:  NTIRDNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS

AT1G30200.2 F-box family protein4.9e-0630.56Show/hide
Query:  NTIRDNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS
        N++ ++ G +   F  +    G LKL+V WTIS++I    + ++L  ++ EH  ++RLV     G G++C +
Subjt:  NTIRDNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS

AT4G18380.1 F-box family protein2.1e-0435.29Show/hide
Query:  GELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS
        G LKL+V WTIS++I    + ++L  ++ EH  ++ LV     G G++C +
Subjt:  GELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS

AT4G18380.2 F-box family protein2.1e-0435.29Show/hide
Query:  GELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS
        G LKL+V WTIS++I    + ++L  ++ EH  ++ LV     G G++C +
Subjt:  GELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS

AT5G46170.1 F-box family protein7.1e-0530.88Show/hide
Query:  DNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS
        D+ G++   F  +    G LKL+V WTIS++I    + ++L  ++ EH  ++ LV     G G++C +
Subjt:  DNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGCTCTTCGCCTAGAGTGTTATGGTGGAGGATTAGGACAGCCCATGTATAGTGGTATGGTGGAGGATTGTTGTGGCTATAACACTATTAGGGATAATCGAGGTGCAAT
GGCGAGTGGCTTTGATTTCCATTTCAATTTCATTGGAGAGCTAAAATTGAAGGTATTTTGGACGATTAGCACTGTGATTACGACGTTGACAAAGCAACACATGTTGGCAG
AGGTGGTGGAGGAGCATTTGGGGATGGAGAGACTGGTTTTTAGAGTCAAAGGAGGCGTAGGCATTGTGTGTCAGAGTGTAAACTTCCAAACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
TTTGCTCTTCGCCTAGAGTGTTATGGTGGAGGATTAGGACAGCCCATGTATAGTGGTATGGTGGAGGATTGTTGTGGCTATAACACTATTAGGGATAATCGAGGTGCAAT
GGCGAGTGGCTTTGATTTCCATTTCAATTTCATTGGAGAGCTAAAATTGAAGGTATTTTGGACGATTAGCACTGTGATTACGACGTTGACAAAGCAACACATGTTGGCAG
AGGTGGTGGAGGAGCATTTGGGGATGGAGAGACTGGTTTTTAGAGTCAAAGGAGGCGTAGGCATTGTGTGTCAGAGTGTAAACTTCCAAACAAAGTAG
Protein sequenceShow/hide protein sequence
FALRLECYGGGLGQPMYSGMVEDCCGYNTIRDNRGAMASGFDFHFNFIGELKLKVFWTISTVITTLTKQHMLAEVVEEHLGMERLVFRVKGGVGIVCQSVNFQTK