; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030566 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030566
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold6:32350395..32356553
RNA-Seq ExpressionSpg030566
SyntenySpg030566
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]7.6e-2664.86Show/hide
Query:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST
        + PRGNR  LQT E+ K          T   PL TLSVL DNDAVVSAG+APLRQRRWEC  GPT    +  S  LVEIELPVPD LPTSAESSRS+SST
Subjt:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST

Query:  WVELYNESVHI
        W+ELY ESVH+
Subjt:  WVELYNESVHI

KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]7.9e-1553.54Show/hide
Query:  SNARFWLFDRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAG------------RAPLRQR---RWECWAGPTQRRSVML-----
        SN + +L   PRGNRS LQT EL K          T    L TLSVLRDNDAVVSAG            RAPL +R   RW  WA PT RRSVML     
Subjt:  SNARFWLFDRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAG------------RAPLRQR---RWECWAGPTQRRSVML-----

Query:  -----VEIELPVPDTLPTSAESSRSSS
             VEIEL VPDTLPTSAESS S+S
Subjt:  -----VEIELPVPDTLPTSAESSRSSS

TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]7.9e-1553.54Show/hide
Query:  SNARFWLFDRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAG------------RAPLRQR---RWECWAGPTQRRSVML-----
        SN + +L   PRGNRS LQT EL K          T    L TLSVLRDNDAVVSAG            RAPL +R   RW  WA PT RRSVML     
Subjt:  SNARFWLFDRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAG------------RAPLRQR---RWECWAGPTQRRSVML-----

Query:  -----VEIELPVPDTLPTSAESSRSSS
             VEIEL VPDTLPTSAESS S+S
Subjt:  -----VEIELPVPDTLPTSAESSRSSS

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]7.6e-2664.86Show/hide
Query:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST
        + PRGNR  LQT E+ K          T   PL TLSVL DNDAVVSAG+APLRQRRWEC  GPT    +  S  LVEIELPVPD LPTSAESSRS+SST
Subjt:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST

Query:  WVELYNESVHI
        W+ELY ESVH+
Subjt:  WVELYNESVHI

TYK27372.1 uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa]1.8e-1451.61Show/hide
Query:  RPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPTQRRSVMLVEIELPVPDTLPTSAE-SSRSSSSTWVEL
        RPRGNR  LQT EL K          T    L TLSVL DND VVSAGRA LRQRRWEC            VEIELPVPDTLPTSA+ S ++    W  +
Subjt:  RPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPTQRRSVMLVEIELPVPDTLPTSAE-SSRSSSSTWVEL

Query:  YNESVHIVNVLLFSKPSYVRDQRY
         + S+    V LF KPS VR   Y
Subjt:  YNESVHIVNVLLFSKPSYVRDQRY

TrEMBL top hitse value%identityAlignment
A0A5A7T7M6 Reverse transcriptase3.7e-2664.86Show/hide
Query:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST
        + PRGNR  LQT E+ K          T   PL TLSVL DNDAVVSAG+APLRQRRWEC  GPT    +  S  LVEIELPVPD LPTSAESSRS+SST
Subjt:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST

Query:  WVELYNESVHI
        W+ELY ESVH+
Subjt:  WVELYNESVHI

A0A5A7TPS6 Retrotrans_gag domain-containing protein2.5e-1451.22Show/hide
Query:  PRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPTQRRSVMLVEIELPVPDTLPTSAE-SSRSSSSTWVELY
        PRGNR  LQT EL K          T    L TLSVL DND VVSAGRA LRQRRWEC            VEIELPVPDTLPTSA+ S ++    W  + 
Subjt:  PRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPTQRRSVMLVEIELPVPDTLPTSAE-SSRSSSSTWVELY

Query:  NESVHIVNVLLFSKPSYVRDQRY
        + S+    V LF KPS VR   Y
Subjt:  NESVHIVNVLLFSKPSYVRDQRY

A0A5A7VGQ5 Uncharacterized protein3.8e-1553.54Show/hide
Query:  SNARFWLFDRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAG------------RAPLRQR---RWECWAGPTQRRSVML-----
        SN + +L   PRGNRS LQT EL K          T    L TLSVLRDNDAVVSAG            RAPL +R   RW  WA PT RRSVML     
Subjt:  SNARFWLFDRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAG------------RAPLRQR---RWECWAGPTQRRSVML-----

Query:  -----VEIELPVPDTLPTSAESSRSSS
             VEIEL VPDTLPTSAESS S+S
Subjt:  -----VEIELPVPDTLPTSAESSRSSS

A0A5D3BTP3 Reverse transcriptase3.7e-2664.86Show/hide
Query:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST
        + PRGNR  LQT E+ K          T   PL TLSVL DNDAVVSAG+APLRQRRWEC  GPT    +  S  LVEIELPVPD LPTSAESSRS+SST
Subjt:  DRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPT----QRRSVMLVEIELPVPDTLPTSAESSRSSSST

Query:  WVELYNESVHI
        W+ELY ESVH+
Subjt:  WVELYNESVHI

A0A5D3DV36 Retrotrans_gag domain-containing protein8.5e-1551.61Show/hide
Query:  RPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPTQRRSVMLVEIELPVPDTLPTSAE-SSRSSSSTWVEL
        RPRGNR  LQT EL K          T    L TLSVL DND VVSAGRA LRQRRWEC            VEIELPVPDTLPTSA+ S ++    W  +
Subjt:  RPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPTQRRSVMLVEIELPVPDTLPTSAE-SSRSSSSTWVEL

Query:  YNESVHIVNVLLFSKPSYVRDQRY
         + S+    V LF KPS VR   Y
Subjt:  YNESVHIVNVLLFSKPSYVRDQRY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATGACAACAAACCTTCCACCACCGACAATGATTTCAGCTCATTTTCAGCTCATTTCTCATCATTTTCCATCCAAATTTTCAGAGCACTTGAGGGAGACGGGGT
TTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCT
CTGGTTTTCTTTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGACGCTACCCTTTTC
GTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAATGTAGCGTCGCGACGCTACCCCCATTCCGGGCCTATAAAAAGGCACCCTTGGGTGCCTCATTTAC
CATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGTGGGAAATATTTTG
GGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGCATGGAAAGACAAAGCTAATTATGGTTCTAATGCTCGGTTT
TGGTTGTTTGATAGGCCAAGAGGAAATAGGTCGGATCTACAAACCTGGGAACTAGCTAAGGCTCCCGAGGCTATATGGTACCGTGTGCACACATGTTATATTCCATTGTT
GACGTTGAGTGTACTCCGTGACAACGATGCTGTAGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCTACACAACGTAGATCGGTCA
TGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTAGAGTTGTATAATGAGTCTGTCCATATT
GTAAATGTTTTGTTATTTTCCAAACCGAGTTATGTCAGGGATCAACGTTACAGGAGGATCAACGGCAACCATCATTGCCCCTCTCCATCTCTCGATAATCTCTCTTCGTC
CGCCACTCACGAACTGCATGTTGTTGTCTGTAACCGCTTGAAGCCACCATCTGTTGTAGCACGAATCTGCCCAACACCTGAGCAGCAACACACCAACTGCTGCAACCTGC
AAATAAGCACAAGACCAGCCGTCGCATCCCCTTCTCCGTCCAACACGCATGGCGATTCATTTTCGATGATTTTGACCCGAGGTAGAGTGCATGAGGTACCCATTGAGATT
GAAGCTCAAAGTACATATGGTTTGAGATGTGAGATGTTGGACTATACGTATTCTTGCAATACTGAACACCTTGGTTATTTGTGTTTGTCTATTGGACGTGCGTGCATTGC
TAATGCAATACCTGCTCGAGTGCAAGCATACACTATCAAATCCCGCGAATCTCGGTATTCTGTCGGAAAGCCCAGTTGTTGTCGCATTTCTGGCGCAATTCTTCATATAC
GCAGCTTTGACGAGTCTGTCGTCAGCATGAGGCTTATTTCCTTATATGGTTTGCGGGCGCATTTTGATCGCATATCCACATCCTCAGGTCCAGATGCAGGCGCAATTCTT
CAACTTCACCTCAGTTGCTCTGCTACCTTTAATCTCCTCCTGCGGGAGCATCCTCCTTGCAAAGTCTTCTCCACAAAAGCATTAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAAATGACAACAAACCTTCCACCACCGACAATGATTTCAGCTCATTTTCAGCTCATTTCTCATCATTTTCCATCCAAATTTTCAGAGCACTTGAGGGAGACGGGGT
TTTGAGGTTGAAGAAGATAGGAAAAGCTCATGCAAAGCCAGCCATAGCAGAATCTGAGTTCAACCTGTCAACCTCTGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCT
CTGGTTTTCTTTGGTTTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTATTTGGGCAGCGTCGAGACGCTATGTAAGCAGCGTCGCGACGCTACCCTTTTC
GTGTTGCCCAAGCCGCGTGCGTTGCAGCGTCGCGACGCTGTGCAATGTAGCGTCGCGACGCTACCCCCATTCCGGGCCTATAAAAAGGCACCCTTGGGTGCCTCATTTAC
CATCAATCAATTCATTCTTCAATCCATTCTTTCCTTCCTTTGGCTCCTTTGGAGCCTCTCTCAAGGCTTTCTAGCCTTTTTGAGAGAATTCTTTAGTGGGAAATATTTTG
GGGAATTTTGGGAGCATCTTAGGAAGCTCAAAGGAGTGTTCGGCGGAGCTCTGAGCGCCAAGCGAAGGGCATGGAAAGACAAAGCTAATTATGGTTCTAATGCTCGGTTT
TGGTTGTTTGATAGGCCAAGAGGAAATAGGTCGGATCTACAAACCTGGGAACTAGCTAAGGCTCCCGAGGCTATATGGTACCGTGTGCACACATGTTATATTCCATTGTT
GACGTTGAGTGTACTCCGTGACAACGATGCTGTAGTGAGTGCTGGGCGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCTACACAACGTAGATCGGTCA
TGTTAGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTAGAGTTGTATAATGAGTCTGTCCATATT
GTAAATGTTTTGTTATTTTCCAAACCGAGTTATGTCAGGGATCAACGTTACAGGAGGATCAACGGCAACCATCATTGCCCCTCTCCATCTCTCGATAATCTCTCTTCGTC
CGCCACTCACGAACTGCATGTTGTTGTCTGTAACCGCTTGAAGCCACCATCTGTTGTAGCACGAATCTGCCCAACACCTGAGCAGCAACACACCAACTGCTGCAACCTGC
AAATAAGCACAAGACCAGCCGTCGCATCCCCTTCTCCGTCCAACACGCATGGCGATTCATTTTCGATGATTTTGACCCGAGGTAGAGTGCATGAGGTACCCATTGAGATT
GAAGCTCAAAGTACATATGGTTTGAGATGTGAGATGTTGGACTATACGTATTCTTGCAATACTGAACACCTTGGTTATTTGTGTTTGTCTATTGGACGTGCGTGCATTGC
TAATGCAATACCTGCTCGAGTGCAAGCATACACTATCAAATCCCGCGAATCTCGGTATTCTGTCGGAAAGCCCAGTTGTTGTCGCATTTCTGGCGCAATTCTTCATATAC
GCAGCTTTGACGAGTCTGTCGTCAGCATGAGGCTTATTTCCTTATATGGTTTGCGGGCGCATTTTGATCGCATATCCACATCCTCAGGTCCAGATGCAGGCGCAATTCTT
CAACTTCACCTCAGTTGCTCTGCTACCTTTAATCTCCTCCTGCGGGAGCATCCTCCTTGCAAAGTCTTCTCCACAAAAGCATTAACTTAG
Protein sequenceShow/hide protein sequence
MGNDNKPSTTDNDFSSFSAHFSSFSIQIFRALEGDGVLRLKKIGKAHAKPAIAESEFNLSTSEHRIFEQSRRISGFLWFFEHSGVYKLNQKLYLGSVETLCKQRRDATLF
VLPKPRALQRRDAVQCSVATLPPFRAYKKAPLGASFTINQFILQSILSFLWLLWSLSQGFLAFLREFFSGKYFGEFWEHLRKLKGVFGGALSAKRRAWKDKANYGSNARF
WLFDRPRGNRSDLQTWELAKAPEAIWYRVHTCYIPLLTLSVLRDNDAVVSAGRAPLRQRRWECWAGPTQRRSVMLVEIELPVPDTLPTSAESSRSSSSTWVELYNESVHI
VNVLLFSKPSYVRDQRYRRINGNHHCPSPSLDNLSSSATHELHVVVCNRLKPPSVVARICPTPEQQHTNCCNLQISTRPAVASPSPSNTHGDSFSMILTRGRVHEVPIEI
EAQSTYGLRCEMLDYTYSCNTEHLGYLCLSIGRACIANAIPARVQAYTIKSRESRYSVGKPSCCRISGAILHIRSFDESVVSMRLISLYGLRAHFDRISTSSGPDAGAIL
QLHLSCSATFNLLLREHPPCKVFSTKALT