; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030600 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030600
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold6:32559750..32562361
RNA-Seq ExpressionSpg030600
SyntenySpg030600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]1.2e-1332.52Show/hide
Query:  PHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLS
        P F+   I  H W QFC         LVREFYA + +       V+ V V ++  AINS+F L++     Y + A+  + EQL   + +V IEGA W++S
Subjt:  PHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLS

Query:  KTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIMRAGVPASRKDVILMD
             T     LK  A  W  F+  R + +T+  TV+ DRVLL+++I+  G+  + +++ + +
Subjt:  KTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIMRAGVPASRKDVILMD

KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]2.9e-1529.12Show/hide
Query:  FVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVG------ITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDF
        FV+  A+  Y  +  R   FE GF         +G      +T H+W +F     PVN+ +V+EFY+ I E      +VRG+++ ++P AIN  F LQ  
Subjt:  FVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVG------ITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDF

Query:  PHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM
                A     E     +  + + G +W   + K++T     L      W  F+K +L+ T++++TVSC R+LL+ +I+
Subjt:  PHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.1e-1736.22Show/hide
Query:  RFVNNIARAKYLEMLK-RDFLFERGFEDD-------LPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNL
        +F    A  +Y   ++ R    E+GF  D       LP   +V IT H W QFCA  E     LVREFYA + + E     VRGV V WS  AIN++F L
Subjt:  RFVNNIARAKYLEMLK-RDFLFERGFEDD-------LPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNL

Query:  QDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM
         D P   ++E     +++ L   +  V   GA+W +S     T   + L   A  W  F+K RLL TT+  TVS DR+LL+ +++
Subjt:  QDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]4.2e-1429.29Show/hide
Query:  VTEATTEIAEEENEGQRLPYERFVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAV
        V    ++  + E++   + YE  + N   +     ++++F+++     + P F+   I  H W  FCA  E     LVREFY  +   +     +RGV V
Subjt:  VTEATTEIAEEENEGQRLPYERFVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAV

Query:  DWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM
          S  AIN++F+L D P   ++E     +K +L   +  V I GA+W +S     T   + L   A  W  F+K RLL TT+  TVS + V L+++++
Subjt:  DWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]1.5e-1426.25Show/hide
Query:  QEEVALDQPSGRRRRKQKAGRIKRVRTDTPSPPTTKSEKENTEKAEEERGKGVTEATTEIAEEENEGQRL-PYERFVNNIARAKYLEMLKRDFLFERGFE
        QE   +D  +  R+R  +  R+ R+ T      ++K  KE++E++E E         +E   EE  G  L P   F   +AR  YL+  ++  + ++GF 
Subjt:  QEEVALDQPSGRRRRKQKAGRIKRVRTDTPSPPTTKSEKENTEKAEEERGKGVTEATTEIAEEENEGQRL-PYERFVNNIARAKYLEMLKRDFLFERGFE

Query:  DDL---PHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEG
          L      ++  I +  W+  C      N + VREF  ++   +G +  VR   V +SP AIN L  L    ++  + +    + E+L+  + KV  EG
Subjt:  DDL---PHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEG

Query:  AQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM-------------------------------------RAGVPASRK
          W   K + R  +  YLK EAN W  F++  +   ++D+ +  +RVL+++ I+                                     +A V A  K
Subjt:  AQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM-------------------------------------RAGVPASRK

Query:  DVILMDKGIIDTPNLTRLQR
        DV+ M+K  ID  NL RL R
Subjt:  DVILMDKGIIDTPNLTRLQR

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.5e-1736.22Show/hide
Query:  RFVNNIARAKYLEMLK-RDFLFERGFEDD-------LPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNL
        +F    A  +Y   ++ R    E+GF  D       LP   +V IT H W QFCA  E     LVREFYA + + E     VRGV V WS  AIN++F L
Subjt:  RFVNNIARAKYLEMLK-RDFLFERGFEDD-------LPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNL

Query:  QDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM
         D P   ++E     +++ L   +  V   GA+W +S     T   + L   A  W  F+K RLL TT+  TVS DR+LL+ +++
Subjt:  QDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM

A0A2P5DAQ2 Uncharacterized protein2.1e-1429.29Show/hide
Query:  VTEATTEIAEEENEGQRLPYERFVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAV
        V    ++  + E++   + YE  + N   +     ++++F+++     + P F+   I  H W  FCA  E     LVREFY  +   +     +RGV V
Subjt:  VTEATTEIAEEENEGQRLPYERFVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAV

Query:  DWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM
          S  AIN++F+L D P   ++E     +K +L   +  V I GA+W +S     T   + L   A  W  F+K RLL TT+  TVS + V L+++++
Subjt:  DWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM

A0A5D2D4Q7 Uncharacterized protein1.3e-1331.1Show/hide
Query:  MLKRDFLFERGFEDDLPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLN
        M K+DF  +      +P  +R  I   +W++FC      +  LV+EFYA +  ++  + IVR   V  +  +IN+LFNL D     Y  M    + + L 
Subjt:  MLKRDFLFERGFEDDLPHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLN

Query:  AAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM
          +  V   G+QW + K    + Q  YLK  A  W+ FV+   +  ++ ST+S +R+LL +AI+
Subjt:  AAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM

A0A6A2ZUE4 Uncharacterized protein1.4e-1529.12Show/hide
Query:  FVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVG------ITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDF
        FV+  A+  Y  +  R   FE GF         +G      +T H+W +F     PVN+ +V+EFY+ I E      +VRG+++ ++P AIN  F LQ  
Subjt:  FVNNIARAKYLEMLKRDFLFERGFEDDLPHFLRVG------ITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDF

Query:  PHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM
                A     E     +  + + G +W   + K++T     L      W  F+K +L+ T++++TVSC R+LL+ +I+
Subjt:  PHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIM

W9QTD9 Uncharacterized protein6.0e-1432.52Show/hide
Query:  PHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLS
        P F+   I  H W QFC         LVREFYA + +       V+ V V ++  AINS+F L++     Y + A+  + EQL   + +V IEGA W++S
Subjt:  PHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLS

Query:  KTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIMRAGVPASRKDVILMD
             T     LK  A  W  F+  R + +T+  TV+ DRVLL+++I+  G+  + +++ + +
Subjt:  KTKKRTFQAAYLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIMRAGVPASRKDVILMD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGAACGAGAGGTAGAAGAGAAAGGGAAGTTGAGGAGGAAGAGGTGTCGGTTACGCCTGAAGCACCGAAAAAGAAAGCGAAGAGAAGAAGAACACCTGAGGAAAG
AGAAGCCAACCGATTAAGAAGGCAACAACAGGCTGAGGTCATAGAGGTTCTGCAAAAAGTAATCGAGGATGTTGCAGAGGAAGTGGCTGGGGAAGAGCAACCAGTAGGTC
CTAAAGAAGGAAAAGGTCCGGAAGAAGGGGAACAACCAGTCGAAACTCAGCAAGAAATACAAGATAAGCGAGGAGAAGATGTGCCAGAGCAAGGGGATCGTCAACCAGAG
GTTCAAGAAAGACAGGAAGTGGCGCAGGAGGAGGTAGCGTTGGATCAGCCATCAGGACGTCGCCGCCGCAAGCAAAAGGCAGGGCGAATCAAGAGGGTCCGGACGGACAC
CCCATCTCCACCCACCACTAAGTCGGAGAAGGAAAACACAGAGAAAGCTGAAGAAGAAAGAGGCAAAGGAGTTACCGAAGCAACAACTGAAATAGCGGAAGAAGAGAATG
AGGGACAACGATTGCCATACGAACGCTTCGTCAACAACATTGCCAGAGCAAAATACTTGGAGATGCTGAAGAGGGATTTTCTTTTTGAAAGAGGATTTGAAGATGACCTA
CCACACTTTTTAAGAGTCGGGATCACAAATCACAGATGGGATCAATTCTGTGCTAAGTCAGAGCCAGTCAACTCAAATTTAGTTCGCGAATTCTATGCAAAAATTGATGA
AGAAGAGGGCTTTCAGGCAATTGTTCGAGGAGTCGCAGTGGATTGGAGCCCAGGTGCGATCAATTCCTTATTCAACCTTCAAGATTTCCCACATGCCGGATATAATGAGA
TGGCGACAACGCCATCTAAGGAGCAGCTGAATGCGGCTATTAGGAAAGTAGGAATAGAAGGGGCCCAATGGCGGTTGTCGAAGACGAAGAAGCGAACTTTTCAAGCTGCT
TATTTGAAGAGTGAAGCGAACACATGGCTGAGCTTCGTTAAGTTGCGTCTTCTACGGACAACCTATGACTCCACTGTCTCCTGTGATCGGGTTCTCTTGGTTTTTGCTAT
TATGAGAGCTGGGGTTCCTGCGAGTAGAAAAGATGTTATTCTTATGGACAAGGGAATAATAGACACGCCGAACCTGACAAGGCTTCAAAGGACTCAAGAAGCACGCCAAG
ACGGTTTGGTGTGTGGCATCCACCAAATTCAAGAACAACTGCAACTGCATTCCAGCAGAATGGAGTATGCCGAAAGGAAATCCCAAACCCAAGGGGCGCCTTTTATAGGC
CCGGAAATGGGACAGCGTCGCGACGATGTGACGTCACTCAACTTGCTTGGCAAGAAATGGGACAGCGTCGTGACACTGTCCTCCAAGCGTCGCGACGCTACGACGATTCC
AGAACCATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGAACGAGAGGTAGAAGAGAAAGGGAAGTTGAGGAGGAAGAGGTGTCGGTTACGCCTGAAGCACCGAAAAAGAAAGCGAAGAGAAGAAGAACACCTGAGGAAAG
AGAAGCCAACCGATTAAGAAGGCAACAACAGGCTGAGGTCATAGAGGTTCTGCAAAAAGTAATCGAGGATGTTGCAGAGGAAGTGGCTGGGGAAGAGCAACCAGTAGGTC
CTAAAGAAGGAAAAGGTCCGGAAGAAGGGGAACAACCAGTCGAAACTCAGCAAGAAATACAAGATAAGCGAGGAGAAGATGTGCCAGAGCAAGGGGATCGTCAACCAGAG
GTTCAAGAAAGACAGGAAGTGGCGCAGGAGGAGGTAGCGTTGGATCAGCCATCAGGACGTCGCCGCCGCAAGCAAAAGGCAGGGCGAATCAAGAGGGTCCGGACGGACAC
CCCATCTCCACCCACCACTAAGTCGGAGAAGGAAAACACAGAGAAAGCTGAAGAAGAAAGAGGCAAAGGAGTTACCGAAGCAACAACTGAAATAGCGGAAGAAGAGAATG
AGGGACAACGATTGCCATACGAACGCTTCGTCAACAACATTGCCAGAGCAAAATACTTGGAGATGCTGAAGAGGGATTTTCTTTTTGAAAGAGGATTTGAAGATGACCTA
CCACACTTTTTAAGAGTCGGGATCACAAATCACAGATGGGATCAATTCTGTGCTAAGTCAGAGCCAGTCAACTCAAATTTAGTTCGCGAATTCTATGCAAAAATTGATGA
AGAAGAGGGCTTTCAGGCAATTGTTCGAGGAGTCGCAGTGGATTGGAGCCCAGGTGCGATCAATTCCTTATTCAACCTTCAAGATTTCCCACATGCCGGATATAATGAGA
TGGCGACAACGCCATCTAAGGAGCAGCTGAATGCGGCTATTAGGAAAGTAGGAATAGAAGGGGCCCAATGGCGGTTGTCGAAGACGAAGAAGCGAACTTTTCAAGCTGCT
TATTTGAAGAGTGAAGCGAACACATGGCTGAGCTTCGTTAAGTTGCGTCTTCTACGGACAACCTATGACTCCACTGTCTCCTGTGATCGGGTTCTCTTGGTTTTTGCTAT
TATGAGAGCTGGGGTTCCTGCGAGTAGAAAAGATGTTATTCTTATGGACAAGGGAATAATAGACACGCCGAACCTGACAAGGCTTCAAAGGACTCAAGAAGCACGCCAAG
ACGGTTTGGTGTGTGGCATCCACCAAATTCAAGAACAACTGCAACTGCATTCCAGCAGAATGGAGTATGCCGAAAGGAAATCCCAAACCCAAGGGGCGCCTTTTATAGGC
CCGGAAATGGGACAGCGTCGCGACGATGTGACGTCACTCAACTTGCTTGGCAAGAAATGGGACAGCGTCGTGACACTGTCCTCCAAGCGTCGCGACGCTACGACGATTCC
AGAACCATCTTGA
Protein sequenceShow/hide protein sequence
MARTRGRREREVEEEEVSVTPEAPKKKAKRRRTPEEREANRLRRQQQAEVIEVLQKVIEDVAEEVAGEEQPVGPKEGKGPEEGEQPVETQQEIQDKRGEDVPEQGDRQPE
VQERQEVAQEEVALDQPSGRRRRKQKAGRIKRVRTDTPSPPTTKSEKENTEKAEEERGKGVTEATTEIAEEENEGQRLPYERFVNNIARAKYLEMLKRDFLFERGFEDDL
PHFLRVGITNHRWDQFCAKSEPVNSNLVREFYAKIDEEEGFQAIVRGVAVDWSPGAINSLFNLQDFPHAGYNEMATTPSKEQLNAAIRKVGIEGAQWRLSKTKKRTFQAA
YLKSEANTWLSFVKLRLLRTTYDSTVSCDRVLLVFAIMRAGVPASRKDVILMDKGIIDTPNLTRLQRTQEARQDGLVCGIHQIQEQLQLHSSRMEYAERKSQTQGAPFIG
PEMGQRRDDVTSLNLLGKKWDSVVTLSSKRRDATTIPEPS