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Spg030611 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030611
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold6:33684356..33689884
RNA-Seq ExpressionSpg030611
SyntenySpg030611
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041121.1 hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa]9.6e-2144.89Show/hide
Query:  EGKSLKN-----KLMEVSFGLARGPNGPTDHGLQLVSKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTE
        + K L+N      L+ V FGL+  P G      +  SKLG   +  DA++        +    D   G S +W   PRGNR SLQT EL   ISIDYMTE
Subjt:  EGKSLKN-----KLMEVSFGLARGPNGPTDHGLQLVSKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTE

Query:  ILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR
        ILS RLYGTVCT                  VEIELPVPD LP  AESS S+SSTW+ELY ESVH+   + K +  R
Subjt:  ILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR

KAA0066850.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.8e-1861.11Show/hide
Query:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI
        WPR NR SLQT EL K +SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP   ES  S+SSTW+ELY E VH+
Subjt:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI

TYK08952.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.9e-1757Show/hide
Query:  PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR
        PR NR SLQT EL K +SIDYMTEILS RL GTVCTQ                 VEIELPVPDTLP  AE   S+SSTW+ELY+ESVH+   + K +  R
Subjt:  PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR

TYK21916.1 hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa]1.8e-1446.15Show/hide
Query:  SKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELP
        SKLG   +  DA++        +    D   G S +W   PRGNRSSLQT EL   ISIDYMTEILS RLYGTVCT                  VEIELP
Subjt:  SKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELP

Query:  VPDTLPRFAESSRSSSSTWVELYIESVHIV
        VPD LP  AESS S+SS +    +  +++V
Subjt:  VPDTLPRFAESSRSSSSTWVELYIESVHIV

TYK27997.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]5.8e-1861.11Show/hide
Query:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI
        WPR NR SLQT EL K +SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP   ES  S+SSTW+ELY E VH+
Subjt:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI

TrEMBL top hitse value%identityAlignment
A0A5A7THH5 Uncharacterized protein4.6e-2144.89Show/hide
Query:  EGKSLKN-----KLMEVSFGLARGPNGPTDHGLQLVSKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTE
        + K L+N      L+ V FGL+  P G      +  SKLG   +  DA++        +    D   G S +W   PRGNR SLQT EL   ISIDYMTE
Subjt:  EGKSLKN-----KLMEVSFGLARGPNGPTDHGLQLVSKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTE

Query:  ILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR
        ILS RLYGTVCT                  VEIELPVPD LP  AESS S+SSTW+ELY ESVH+   + K +  R
Subjt:  ILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR

A0A5A7VI26 Putative DNA/RNA polymerases superfamily protein2.8e-1861.11Show/hide
Query:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI
        WPR NR SLQT EL K +SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP   ES  S+SSTW+ELY E VH+
Subjt:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI

A0A5D3CCC7 DNA/RNA polymerases superfamily protein1.4e-1757Show/hide
Query:  PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR
        PR NR SLQT EL K +SIDYMTEILS RL GTVCTQ                 VEIELPVPDTLP  AE   S+SSTW+ELY+ESVH+   + K +  R
Subjt:  PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR

A0A5D3DE96 Uncharacterized protein8.5e-1546.15Show/hide
Query:  SKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELP
        SKLG   +  DA++        +    D   G S +W   PRGNRSSLQT EL   ISIDYMTEILS RLYGTVCT                  VEIELP
Subjt:  SKLGSHRL--DAVTFCHEITEGKSERRDALVGGSRRW---PRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELP

Query:  VPDTLPRFAESSRSSSSTWVELYIESVHIV
        VPD LP  AESS S+SS +    +  +++V
Subjt:  VPDTLPRFAESSRSSSSTWVELYIESVHIV

A0A5D3DW05 Putative DNA/RNA polymerases superfamily protein2.8e-1861.11Show/hide
Query:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI
        WPR NR SLQT EL K +SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP   ES  S+SSTW+ELY E VH+
Subjt:  WPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPRFAESSRSSSSTWVELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATTTGAAGGGAAAAGCTTGAAGAACAAGCTTATGGAGGTTAGTTTCGGGCTAGCAAGGGGACCTAATGGACCTACAGATCACGGGCTCCAACTCGTCTCGAAGCT
AGGGTCACACCGTCTCGACGCTGTGACCTTTTGCCACGAGATCACCGAAGGAAAGTCTGAGCGTCGCGACGCCCTAGTTGGAGGGTCTCGACGCTGGCCAAGAGGAAATA
GGTCGAGTCTACAGACCAGGGAACTAGCTAAGATAATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACAGTGTGCACACAGGTAGAGATCGAG
CTCCCAGTGCCTGATACATTGCCAAGGTTTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGTTCAACGTTACAGGAA
GGTCAACGGGTATCGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATTTGAAGGGAAAAGCTTGAAGAACAAGCTTATGGAGGTTAGTTTCGGGCTAGCAAGGGGACCTAATGGACCTACAGATCACGGGCTCCAACTCGTCTCGAAGCT
AGGGTCACACCGTCTCGACGCTGTGACCTTTTGCCACGAGATCACCGAAGGAAAGTCTGAGCGTCGCGACGCCCTAGTTGGAGGGTCTCGACGCTGGCCAAGAGGAAATA
GGTCGAGTCTACAGACCAGGGAACTAGCTAAGATAATTTCTATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACAGTGTGCACACAGGTAGAGATCGAG
CTCCCAGTGCCTGATACATTGCCAAGGTTTGCTGAAAGTTCCAGATCAAGCTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTCCATATTGTTCAACGTTACAGGAA
GGTCAACGGGTATCGTTAG
Protein sequenceShow/hide protein sequence
MEFEGKSLKNKLMEVSFGLARGPNGPTDHGLQLVSKLGSHRLDAVTFCHEITEGKSERRDALVGGSRRWPRGNRSSLQTRELAKIISIDYMTEILSPRLYGTVCTQVEIE
LPVPDTLPRFAESSRSSSSTWVELYIESVHIVQRYRKVNGYR