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Spg030625 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030625
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related pol polyprotein from transposon tnt 1-94
Genome locationscaffold7:35725801..35733553
RNA-Seq ExpressionSpg030625
SyntenySpg030625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4375842.1 hypothetical protein G4B88_026421 [Cannabis sativa]9.8e-0944.93Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEE
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I  EI  C  +  GKL F  LIT+ C+   +    DE+
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEE

MCI09484.1 hypothetical protein [Trifolium medium]6.3e-0838.89Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA--GKLIFGSLITQLCQRVKI-VPGKDE----ERHFFKLTIDLSLIGKLQHNSLQRK
        MPTTH+ T++  R++LL+CI+ G +IN+G II  EI+ C  K++  G L F  LIT+LC++  + V G+DE       F +  I+  L G       Q+ 
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA--GKLIFGSLITQLCQRVKI-VPGKDE----ERHFFKLTIDLSLIGKLQHNSLQRK

Query:  GKASTSQA
         +A+TS A
Subjt:  GKASTSQA

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]1.3e-0828.43Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS
        +PTTH  T+S DR++LLY ++ G  IN+G +I  EI AC  +++G L F SLITQLC+  +     +EE+      ID   + ++ Q    +   + STS
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS

Query:  QATPPSG---------------------------------------------SNERDEAIREFYLSIAPSIAPDFPNFPQSLLPQEDKDSDDEEDDENDD
        + T  S                                              S ERD A+++   +      P FP FPQ LL   D + + E D +  +
Subjt:  QATPPSG---------------------------------------------SNERDEAIREFYLSIAPSIAPDFPNFPQSLLPQEDKDSDDEEDDENDD

Query:  EVDE
        E  E
Subjt:  EVDE

PON65869.1 hypothetical protein PanWU01x14_113580, partial [Parasponia andersonii]2.4e-0731.62Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS
        +PTTH   +S + V+LLY ++ G  IN+G II  EI AC  ++ G L F SLIT++C+  +     +EE+      ID   + ++ Q    +   ++S+S
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS

Query:  QATPPSGSNERDEAIRE
        + +  S S+   E +++
Subjt:  QATPPSGSNERDEAIRE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]6.8e-1040.66Show/hide
Query:  PTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDE---ERHFFKLTIDLSLIGKLQHNS
        PTTHDS+ISV++++LLYC++ G  IN+G ++   IL C ++R GKL F SLI +L  +  +    D+   +    K TID+  + KL+  S
Subjt:  PTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDE---ERHFFKLTIDLSLIGKLQHNS

TrEMBL top hitse value%identityAlignment
A0A2P5CEY2 Uncharacterized protein6.2e-0928.43Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS
        +PTTH  T+S DR++LLY ++ G  IN+G +I  EI AC  +++G L F SLITQLC+  +     +EE+      ID   + ++ Q    +   + STS
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS

Query:  QATPPSG---------------------------------------------SNERDEAIREFYLSIAPSIAPDFPNFPQSLLPQEDKDSDDEEDDENDD
        + T  S                                              S ERD A+++   +      P FP FPQ LL   D + + E D +  +
Subjt:  QATPPSG---------------------------------------------SNERDEAIREFYLSIAPSIAPDFPNFPQSLLPQEDKDSDDEEDDENDD

Query:  EVDE
        E  E
Subjt:  EVDE

A0A2P5CXU3 Uncharacterized protein (Fragment)1.2e-0731.62Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS
        +PTTH   +S + V+LLY ++ G  IN+G II  EI AC  ++ G L F SLIT++C+  +     +EE+      ID   + ++ Q    +   ++S+S
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKL-QHNSLQRKGKASTS

Query:  QATPPSGSNERDEAIRE
        + +  S S+   E +++
Subjt:  QATPPSGSNERDEAIRE

A0A392PCH7 Uncharacterized protein3.1e-0838.89Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA--GKLIFGSLITQLCQRVKI-VPGKDE----ERHFFKLTIDLSLIGKLQHNSLQRK
        MPTTH+ T++  R++LL+CI+ G +IN+G II  EI+ C  K++  G L F  LIT+LC++  + V G+DE       F +  I+  L G       Q+ 
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRA--GKLIFGSLITQLCQRVKI-VPGKDE----ERHFFKLTIDLSLIGKLQHNSLQRK

Query:  GKASTSQA
         +A+TS A
Subjt:  GKASTSQA

A0A7J6FZ22 Uncharacterized protein4.7e-0944.93Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEE
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I  EI  C  +  GKL F  LIT+ C+   +    DE+
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEE

A0A803Q715 Uncharacterized protein4.7e-0944.93Show/hide
Query:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEE
        +PT+HDST+S +R+ +LYCI+KG +IN+G +I  EI  C  +  GKL F  LIT+ C+   +    DE+
Subjt:  MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAACCACCCACGACAGCACGATCTCAGTAGATAGAGTTATGCTACTCTACTGTATTATGAAGGGGTTGGAGATCAATATTGGGAGCATTATCAGGGATGAAATTCT
AGCCTGTGGAAGGAAAAGAGCAGGTAAGCTTATCTTTGGATCACTTATCACCCAGCTTTGCCAGAGGGTGAAGATTGTTCCGGGCAAGGACGAGGAGCGTCATTTCTTCA
AGCTGACCATTGACCTGTCCTTGATCGGGAAGCTTCAACATAATAGCCTCCAAAGGAAAGGCAAAGCCTCCACATCTCAGGCCACTCCACCATCAGGGTCGAACGAGAGG
GATGAGGCCATTAGAGAGTTCTATCTCTCTATTGCCCCGAGTATTGCTCCGGATTTTCCCAATTTCCCTCAATCGTTGCTGCCTCAAGAAGACAAGGATTCTGATGATGA
AGAAGATGATGAGAATGATGATGAAGTAGATGAAGAGAAAGAGAGAAAACAGAGGAAATGTTGGAATTTACCCAGAAATGCGACCGCATTTCTGGAAAGGCAAAATGAAA
TGCGACCGCATTTCTGGAAAAACAGAGGCAGTTTCGAGCTGTCCACGGGTCATTCTGAGCCCGATGCATGTGATTCAACGTGCATACTAGTGGAGGCAGGAGCTGAGCAT
GTTGAATTAGCTTCAGCTATTATTATACCATTTTCTGTTCCTCCAAAGTTTTACTACAATGTTTCACATGACTTAGGCTTAGTAATTCCAATCAATGATCATTTTGTTGC
TGAGAATAAAGTAGTTCTGATTAGCATGTTGAGGATTGGCACATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGG
CTGGGGACATGACAATACAAGAAGGAATTCACTCCTTCCCACTTCTAGGAGAATTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCATCAAATGGTGGTGTTCTTCGT
TGTTGTAGAGCAAACAAGAATCATCCGTTCAAGTATTCAGAGTCGTCAACGGAGTTTTGGAGCCATCATGGTGTATTGGATGACGATGAGGTGAAAAGACCCAATTATGT
TGGAGCGGGCCTGAAGAATGACACCAAAAGCCGAAGATTGGAGCCTCGTACCGAGAAGAAGCGAGACAAGACCGAGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAACCACCCACGACAGCACGATCTCAGTAGATAGAGTTATGCTACTCTACTGTATTATGAAGGGGTTGGAGATCAATATTGGGAGCATTATCAGGGATGAAATTCT
AGCCTGTGGAAGGAAAAGAGCAGGTAAGCTTATCTTTGGATCACTTATCACCCAGCTTTGCCAGAGGGTGAAGATTGTTCCGGGCAAGGACGAGGAGCGTCATTTCTTCA
AGCTGACCATTGACCTGTCCTTGATCGGGAAGCTTCAACATAATAGCCTCCAAAGGAAAGGCAAAGCCTCCACATCTCAGGCCACTCCACCATCAGGGTCGAACGAGAGG
GATGAGGCCATTAGAGAGTTCTATCTCTCTATTGCCCCGAGTATTGCTCCGGATTTTCCCAATTTCCCTCAATCGTTGCTGCCTCAAGAAGACAAGGATTCTGATGATGA
AGAAGATGATGAGAATGATGATGAAGTAGATGAAGAGAAAGAGAGAAAACAGAGGAAATGTTGGAATTTACCCAGAAATGCGACCGCATTTCTGGAAAGGCAAAATGAAA
TGCGACCGCATTTCTGGAAAAACAGAGGCAGTTTCGAGCTGTCCACGGGTCATTCTGAGCCCGATGCATGTGATTCAACGTGCATACTAGTGGAGGCAGGAGCTGAGCAT
GTTGAATTAGCTTCAGCTATTATTATACCATTTTCTGTTCCTCCAAAGTTTTACTACAATGTTTCACATGACTTAGGCTTAGTAATTCCAATCAATGATCATTTTGTTGC
TGAGAATAAAGTAGTTCTGATTAGCATGTTGAGGATTGGCACATGGGTGAGAGTGGCCAATACGCCGACTCAATATGCCTTCCTTTTTGGGGACAAGACCGAGTGGGAGG
CTGGGGACATGACAATACAAGAAGGAATTCACTCCTTCCCACTTCTAGGAGAATTAGATGAGTGTCCATTAGGTCCCCCTGCTAGCTCATCAAATGGTGGTGTTCTTCGT
TGTTGTAGAGCAAACAAGAATCATCCGTTCAAGTATTCAGAGTCGTCAACGGAGTTTTGGAGCCATCATGGTGTATTGGATGACGATGAGGTGAAAAGACCCAATTATGT
TGGAGCGGGCCTGAAGAATGACACCAAAAGCCGAAGATTGGAGCCTCGTACCGAGAAGAAGCGAGACAAGACCGAGAATTAA
Protein sequenceShow/hide protein sequence
MPTTHDSTISVDRVMLLYCIMKGLEINIGSIIRDEILACGRKRAGKLIFGSLITQLCQRVKIVPGKDEERHFFKLTIDLSLIGKLQHNSLQRKGKASTSQATPPSGSNER
DEAIREFYLSIAPSIAPDFPNFPQSLLPQEDKDSDDEEDDENDDEVDEEKERKQRKCWNLPRNATAFLERQNEMRPHFWKNRGSFELSTGHSEPDACDSTCILVEAGAEH
VELASAIIIPFSVPPKFYYNVSHDLGLVIPINDHFVAENKVVLISMLRIGTWVRVANTPTQYAFLFGDKTEWEAGDMTIQEGIHSFPLLGELDECPLGPPASSSNGGVLR
CCRANKNHPFKYSESSTEFWSHHGVLDDDEVKRPNYVGAGLKNDTKSRRLEPRTEKKRDKTEN