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Spg030630 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030630
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L36
Genome locationscaffold7:35698410..35703526
RNA-Seq ExpressionSpg030630
SyntenySpg030630
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5230689.1 60S ribosomal protein [Salix suchowensis]3.3e-0969.35Show/hide
Query:  GHIVT-KELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT K+LAP PSD KG   +++LK+GKDK  LKVAK  LGT KRAKKKREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

KAG6382517.1 hypothetical protein SASPL_157811 [Salvia splendens]2.0e-0969.35Show/hide
Query:  GHIVT-KELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT KELAP PSD KG+ I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS  LRK+R
Subjt:  GHIVT-KELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

KAG6481523.1 hypothetical protein ZIOFF_058127 [Zingiber officinale]3.3e-0943.75Show/hide
Query:  VVENVHYLLHFGNIYSIWNPLTGSVCTLNVLSEIPWDVTRSLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTL
        V   VH LLH G   +   P TG    LN              GH+VT +ELAP PS  KG                       K+I ++LK+GKDK  L
Subjt:  VVENVHYLLHFGNIYSIWNPLTGSVCTLNVLSEIPWDVTRSLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTL

Query:  KVAKITLGTQKRAKKKREEMSNVLRKLR
        KVAK  LGT KRAKKKREEM+NVLRK+R
Subjt:  KVAKITLGTQKRAKKKREEMSNVLRKLR

KAG6485398.1 hypothetical protein ZIOFF_053935 [Zingiber officinale]3.3e-0943.18Show/hide
Query:  VLRKVVENVHYLLHFGNIYSIWNPLTGSVCTLNVLSEIPWDVTRSLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKD
        VL +    VH LLH G   +   P TG    LN              GH+VT +ELAP PS  KG                       K+I ++LK+GKD
Subjt:  VLRKVVENVHYLLHFGNIYSIWNPLTGSVCTLNVLSEIPWDVTRSLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKD

Query:  KCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        K  LKVAK  LGT KRAKKKREEM+NVLRK+R
Subjt:  KCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

XP_021615114.1 60S ribosomal protein L36-2-like [Manihot esculenta]3.3e-0955.68Show/hide
Query:  SLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        S  GHIVT KELAP PSD KG                       K+I ++LK+GKDK  LKVAK  LGT KRAKKKREEMSNVLRK+R
Subjt:  SLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

TrEMBL top hitse value%identityAlignment
A0A2C9VT24 60S ribosomal protein L361.6e-0955.68Show/hide
Query:  SLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        S  GHIVT KELAP PSD KG                       K+I ++LK+GKDK  LKVAK  LGT KRAKKKREEMSNVLRK+R
Subjt:  SLHGHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

A0A4D8XW47 Large subunit ribosomal protein L36e9.4e-1069.35Show/hide
Query:  GHIVT-KELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT KELAP PSD KG+ I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS  LRK+R
Subjt:  GHIVT-KELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

A0A6J5U7U7 60S ribosomal protein L362.1e-0956.47Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GHIVT KELAP PSD KG                       K+I ++LK+GKDK  LKVAK  LGT KRAKKKREEMSNVLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

M5W0W2 60S ribosomal protein L362.1e-0956.47Show/hide
Query:  GHIVTK-ELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GHIVTK ELAP PSD KG                       K+I ++LK+GKDK  LKVAK  LGT KRAKKKREEMSNVLRK+R
Subjt:  GHIVTK-ELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

M5X172 60S ribosomal protein L362.1e-0956.47Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GHIVT KELAP PSD KG                       K+I ++LK+GKDK  LKVAK  LGT KRAKKKREEMSNVLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-11.6e-0949.41Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT +ELAP P+  KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

Q9LRB8 60S ribosomal protein L366.7e-0548.28Show/hide
Query:  VTKELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        V +E+A W      +++ ++LK+GKDK  LK+ K  LGT  R KKKREEM+ VLRK++
Subjt:  VTKELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

Q9LZ57 60S ribosomal protein L36-31.0e-0848.24Show/hide
Query:  GHIVTK-ELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VTK E  P P++ KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVTK-ELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

Q9M352 60S ribosomal protein L36-22.6e-0949.41Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT +ELAP P   KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein1.1e-1049.41Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT +ELAP P+  KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

AT2G37600.2 Ribosomal protein L36e family protein1.1e-1049.41Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT +ELAP P+  KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

AT3G53740.2 Ribosomal protein L36e family protein1.9e-1049.41Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT +ELAP P   KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

AT3G53740.3 Ribosomal protein L36e family protein1.9e-1049.41Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT +ELAP P   KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR

AT3G53740.4 Ribosomal protein L36e family protein1.9e-1049.41Show/hide
Query:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR
        GH+VT +ELAP P   KG                       K+I ++LK+GKDK  LKVAK  LGT KRAK+KREEMS+VLRK+R
Subjt:  GHIVT-KELAPWPSDHKG-----------------------KQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEMSNVLRKLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atggctgaaggctgtcattcgcgtacgtgggttgtgggttgtcgcaaGAGGAAGGACACGGGGGAGGAAGGTCGCGAGCTTGGCGTGAAGAAGAAGAAGAACGAAAGGAT
TTGGCTCGGGTGGAAGAAGATGGTTGCTGCTGAAAACGTGAAGGGGAAGAGAGGGAATGAAGAAGATGAAGAGAAGTACTTGCTGAAGGAAGATGGTCTTCTAAGTGATC
CATCCATCATTGTCCATTACATTCTTCTTGGTCCAAATGCAAAATCTGTTATTATTGCATTTCGATTAGTTTTGGCTAAGGAAGTTTCTGCTGGAAGTTTCGCCAAGGTT
ATACCTAACATAAAAGAGGAGTTGGCAAAGGTTTTGAGAAAGGTTGTGGAAAATGTTCATTACTTATTGCATTTCGGAAACATTTATTCTATTTGGAACCCTTTAACCGG
GAGTGTTTGCACTTTGAATGTGCTTAGTGAAATACCTTGGGATGTGACTAGAAGTTTGCATGGTCACATAGTCACCAAGGAGTTGGCTCCATGGCCCTCTGATCACAAAG
GAAAGCAAATCAATAAGGTTCTAAAACTTGGAAAAGACAAGTGTACTCTGAAGGTAGCCAAGATAACACTTGGAACTCAGAAAAGAGCTAAGAAGAAGCGTGAGGAGATG
TCCAACGTTCTAAGAAAGTTGAGGTAA
mRNA sequenceShow/hide mRNA sequence
atggctgaaggctgtcattcgcgtacgtgggttgtgggttgtcgcaaGAGGAAGGACACGGGGGAGGAAGGTCGCGAGCTTGGCGTGAAGAAGAAGAAGAACGAAAGGAT
TTGGCTCGGGTGGAAGAAGATGGTTGCTGCTGAAAACGTGAAGGGGAAGAGAGGGAATGAAGAAGATGAAGAGAAGTACTTGCTGAAGGAAGATGGTCTTCTAAGTGATC
CATCCATCATTGTCCATTACATTCTTCTTGGTCCAAATGCAAAATCTGTTATTATTGCATTTCGATTAGTTTTGGCTAAGGAAGTTTCTGCTGGAAGTTTCGCCAAGGTT
ATACCTAACATAAAAGAGGAGTTGGCAAAGGTTTTGAGAAAGGTTGTGGAAAATGTTCATTACTTATTGCATTTCGGAAACATTTATTCTATTTGGAACCCTTTAACCGG
GAGTGTTTGCACTTTGAATGTGCTTAGTGAAATACCTTGGGATGTGACTAGAAGTTTGCATGGTCACATAGTCACCAAGGAGTTGGCTCCATGGCCCTCTGATCACAAAG
GAAAGCAAATCAATAAGGTTCTAAAACTTGGAAAAGACAAGTGTACTCTGAAGGTAGCCAAGATAACACTTGGAACTCAGAAAAGAGCTAAGAAGAAGCGTGAGGAGATG
TCCAACGTTCTAAGAAAGTTGAGGTAA
Protein sequenceShow/hide protein sequence
MAEGCHSRTWVVGCRKRKDTGEEGRELGVKKKKNERIWLGWKKMVAAENVKGKRGNEEDEEKYLLKEDGLLSDPSIIVHYILLGPNAKSVIIAFRLVLAKEVSAGSFAKV
IPNIKEELAKVLRKVVENVHYLLHFGNIYSIWNPLTGSVCTLNVLSEIPWDVTRSLHGHIVTKELAPWPSDHKGKQINKVLKLGKDKCTLKVAKITLGTQKRAKKKREEM
SNVLRKLR