; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030676 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030676
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotransposon protein
Genome locationscaffold11:25031447..25036845
RNA-Seq ExpressionSpg030676
SyntenySpg030676
Gene Ontology termsNA
InterPro domainsIPR009027 - Ribosomal protein L9/RNase H1, N-terminal
IPR011320 - Ribonuclease H1, N-terminal
IPR024752 - Myb/SANT-like domain
IPR037056 - Ribonuclease H1, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033487.1 uncharacterized protein E6C27_scaffold261G00210 [Cucumis melo var. makuwa]1.1e-7149.31Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHI+AHDVKN+V RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+L   I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   +    ED+P TPTS     GS
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGS

KAA0034843.1 retrotransposon protein [Cucumis melo var. makuwa]3.2e-6635.36Show/hide
Query:  PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLR
        PY  RH+IRQLA FR+IH SDL CR+STRMDRRCFAILC LLRT +GL  TE+VDVEEMVAMFLHI+AHDVKN+VI+R+F RSGET+SRHFN  L AV+R
Subjt:  PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLR

Query:  LYDVLLKKPEPITTSCQDGR--------------------------------------------------------------------------------
        L+D LLKKP+P+   C D R                                                                                
Subjt:  LYDVLLKKPEPITTSCQDGR--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------LMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSG
                 M  + +  KH WT++EEA     LVELV+ GGWR DNGTFR GYL +L +M+  K+  C I + S ID +++ +KR + A++EM GP CSG
Subjt:  --------LMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSG

Query:  FVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDV
        F WNDE KCI AE+EV+D W  SH AAKGLLNK F HY++L++VFGKDRA+GG        AD    +  G     A+        P  +L  +M  +D+
Subjt:  FVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDV

Query:  PITPTSRPS
          T T+R S
Subjt:  PITPTSRPS

TYK05796.1 retrotransposon protein [Cucumis melo var. makuwa]6.3e-6250.38Show/hide
Query:  QIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLL
        +IRQLA FR+IHESDL CR+STRMDRR FAILC LL+T SGL  TEIVDVEEMVAMFLH++AHD+KN VI+R+F RS ETVSRHFN  L  V+RLY+ L+
Subjt:  QIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLL

Query:  KKPEPITTSCQDGRLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDC------KVRSLKRQYS
        K+P P+T +C+D R     +           +   ++  V       +R   G     Y+      +K    TC  E      C       V        
Subjt:  KKPEPITTSCQDGRLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDC------KVRSLKRQYS

Query:  AISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG
        AI+EM GP CSGF WNDE KCI  E+E++D WV+SH A KGLLNKPFP+Y++L +VFG+DRA+G
Subjt:  AISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG

TYK07921.1 hypothetical protein E5676_scaffold265G00330 [Cucumis melo var. makuwa]1.3e-6743.73Show/hide
Query:  MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQ-DG---------
        MDRRCF ILC++LRT  GL  T+ VDV+EMV +FLHI+AHDVKN+V RR  ARSGETVSRHFN  L+AVLRL+++LLK+P+P+T SC  DG         
Subjt:  MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQ-DG---------

Query:  ------------------------------------RLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIE
                                             + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF++GYL                 
Subjt:  ------------------------------------RLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIE

Query:  STSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEG
                     +QY+AI+EM+GP CSGF WN+  KCI+ E+ V+D WVK H  A+GLLNKPFP++ DL  VFG+DRA+GG C  P E +  T  D E 
Subjt:  STSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEG

Query:  DQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS
        D      +D  +P P  +   +    ED+P TPTS     GSS
Subjt:  DQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS

TYK26842.1 uncharacterized protein E5676_scaffold260G00340 [Cucumis melo var. makuwa]5.1e-7249.48Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHI+AHDVKN+V RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+L   I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   +    ED+P TPTS     GSS
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS

TrEMBL top hitse value%identityAlignment
A0A5A7SW62 Myb_DNA-bind_3 domain-containing protein5.5e-7249.31Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHI+AHDVKN+V RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+L   I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   +    ED+P TPTS     GS
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGS

A0A5A7SWD8 Retrotransposon protein1.6e-6635.36Show/hide
Query:  PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLR
        PY  RH+IRQLA FR+IH SDL CR+STRMDRRCFAILC LLRT +GL  TE+VDVEEMVAMFLHI+AHDVKN+VI+R+F RSGET+SRHFN  L AV+R
Subjt:  PY-LRHQIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLR

Query:  LYDVLLKKPEPITTSCQDGR--------------------------------------------------------------------------------
        L+D LLKKP+P+   C D R                                                                                
Subjt:  LYDVLLKKPEPITTSCQDGR--------------------------------------------------------------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  --------LMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSG
                 M  + +  KH WT++EEA     LVELV+ GGWR DNGTFR GYL +L +M+  K+  C I + S ID +++ +KR + A++EM GP CSG
Subjt:  --------LMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSG

Query:  FVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDV
        F WNDE KCI AE+EV+D W  SH AAKGLLNK F HY++L++VFGKDRA+GG        AD    +  G     A+        P  +L  +M  +D+
Subjt:  FVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDV

Query:  PITPTSRPS
          T T+R S
Subjt:  PITPTSRPS

A0A5D3C620 Retrotransposon protein3.0e-6250.38Show/hide
Query:  QIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLL
        +IRQLA FR+IHESDL CR+STRMDRR FAILC LL+T SGL  TEIVDVEEMVAMFLH++AHD+KN VI+R+F RS ETVSRHFN  L  V+RLY+ L+
Subjt:  QIRQLACFRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLL

Query:  KKPEPITTSCQDGRLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDC------KVRSLKRQYS
        K+P P+T +C+D R     +           +   ++  V       +R   G     Y+      +K    TC  E      C       V        
Subjt:  KKPEPITTSCQDGRLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDC------KVRSLKRQYS

Query:  AISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG
        AI+EM GP CSGF WNDE KCI  E+E++D WV+SH A KGLLNKPFP+Y++L +VFG+DRA+G
Subjt:  AISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG

A0A5D3C7T4 Uncharacterized protein6.3e-6843.73Show/hide
Query:  MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQ-DG---------
        MDRRCF ILC++LRT  GL  T+ VDV+EMV +FLHI+AHDVKN+V RR  ARSGETVSRHFN  L+AVLRL+++LLK+P+P+T SC  DG         
Subjt:  MDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQ-DG---------

Query:  ------------------------------------RLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIE
                                             + +   K  KH WT  E+  LVE L++LV EGGWR DNGTF++GYL                 
Subjt:  ------------------------------------RLMAGADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIE

Query:  STSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEG
                     +QY+AI+EM+GP CSGF WN+  KCI+ E+ V+D WVK H  A+GLLNKPFP++ DL  VFG+DRA+GG C  P E +  T  D E 
Subjt:  STSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEG

Query:  DQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS
        D      +D  +P P  +   +    ED+P TPTS     GSS
Subjt:  DQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS

A0A5D3DTL0 Myb_DNA-bind_3 domain-containing protein2.5e-7249.48Show/hide
Query:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR
        +LRT  GL  T+ VDVEEMV +FLHI+AHDVKN+V RR FARSGETVSRHFN  L+ VLRL+++LLK+P+ +T SC   +     + +   K  KH WT 
Subjt:  LLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGR-----LMAGADKQQKHIWTR

Query:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS
         E+  LVE L++LV +G WR DNGTF+ GYL ++++++K+K+L   I+ T  ++  V+ LK+QY+ I+EM+GP CSGF WN E KCI+AE+ V + WVK 
Subjt:  QEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKS

Query:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS
        H  A+ LLNKPFP++ DL  VFG+DRA+GG C  P E    T  D E D  +   +D  +P P  +   +    ED+P TPTS     GSS
Subjt:  HSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSS

SwissProt top hitse value%identityAlignment
Q07762 Ribonuclease H8.6e-0636.56Show/hide
Query:  YVVFVGRNPGIYTSWVDCHKQVNQFKGALHKSYPTFPEAEYAFRQYVTGTRGEANL--VDQHDACRNLPVGGYGTVGKCYSISRMIENQTPYL
        YVV VGR  GIY++W  C +QV  F GA++KS+ T  EA    R Y+T     + L   D+ D   +L       VG     SR  E +  Y+
Subjt:  YVVFVGRNPGIYTSWVDCHKQVNQFKGALHKSYPTFPEAEYAFRQYVTGTRGEANL--VDQHDACRNLPVGGYGTVGKCYSISRMIENQTPYL

Q9KEI9 Ribonuclease H6.4e-0960Show/hide
Query:  MGTSKLYVVFVGRNPGIYTSWVDCHKQVNQFKGALHKSYPTFPEAEYAFR
        M  SK YVV+ GR PGIYTSW  C  QV  + GA  KSYP+  EAE AFR
Subjt:  MGTSKLYVVFVGRNPGIYTSWVDCHKQVNQFKGALHKSYPTFPEAEYAFR

Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein3.6e-0727.97Show/hide
Query:  GADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIK--DKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKC
        G +K   + WT  E     + L+EL+ +  WR  +G   +G L    +++   +K L C     + +  +++ LK  Y +  + L    SGF W+ E K 
Subjt:  GADKQQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIK--DKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKC

Query:  IQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG
          A  EV+  ++K+H   K +  +   H+EDL  +FG   A+G
Subjt:  IQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASG

AT4G02210.1 unknown protein2.5e-0829.21Show/hide
Query:  VIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD
        V+  + +SL+RQ++AI  +L     GF W++E + + A+  V+  ++K+H  A+  + +P P+Y+DL  + G        C V  +  D
Subjt:  VIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD

AT4G02210.2 unknown protein2.5e-0829.21Show/hide
Query:  VIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD
        V+  + +SL+RQ++AI  +L     GF W++E + + A+  V+  ++K+H  A+  + +P P+Y+DL  + G        C V  +  D
Subjt:  VIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHSAAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQAD

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.8e-1137.5Show/hide
Query:  FRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRL
        +++++  +  C E+ RMD+  F  LC LL+T   L  T  + +E  +A+FL II H+++ + ++  F  SGET+SRHFN  L+AV+ +
Subjt:  FRLIHESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACATCGAAATTATATGTTGTGTTTGTTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGATTGCCACAAACAAGTTAACCAGTTTAAGGGAGCACTACACAA
GTCGTATCCAACATTTCCAGAAGCAGAGTACGCATTTAGGCAGTACGTTACGGGCACACGTGGCGAAGCAAACCTCGTTGACCAACATGATGCGTGTCGTAACCTTCCTG
TAGGGGGCTATGGAACCGTAGGAAAATGTTACAGTATTAGTCGGATGATAGAAAACCAAACTCCATACCTCAGACACCAGATAAGGCAGTTAGCCTGCTTCCGGTTGATT
CATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGT
AGACGTGGAAGAGATGGTCGCGATGTTCTTGCACATCATTGCTCATGATGTTAAGAATCAAGTCATTAGAAGACAGTTTGCACGGTCGGGCGAAACCGTTTCTCGACACT
TCAACACGACTTTGAGTGCCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGACTAATGGCAGGTGCAGATAAA
CAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGTCGG
ATACCTAGCCCGACTGAAGCAGATGATAAAAGATAAAATGCTGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTGCGGTCCTTGAAACGGCAATACAGTG
CCATCTCGGAGATGCTGGGTCCGGGCTGCAGTGGATTTGTTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCA
GCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAGGC
AGACAGCACCCACGGGGACGACGAAGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCGCCCCTCCAGACATTAATCTGGCCGCGGACATGGACTTCGAGG
ACGTCCCCATCACACCGACAAGCCGACCAAGCACTGTAGGGTCCTCCCATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGACATCGAAATTATATGTTGTGTTTGTTGGTCGCAACCCAGGAATTTACACCTCGTGGGTTGATTGCCACAAACAAGTTAACCAGTTTAAGGGAGCACTACACAA
GTCGTATCCAACATTTCCAGAAGCAGAGTACGCATTTAGGCAGTACGTTACGGGCACACGTGGCGAAGCAAACCTCGTTGACCAACATGATGCGTGTCGTAACCTTCCTG
TAGGGGGCTATGGAACCGTAGGAAAATGTTACAGTATTAGTCGGATGATAGAAAACCAAACTCCATACCTCAGACACCAGATAAGGCAGTTAGCCTGCTTCCGGTTGATT
CATGAAAGTGACCTATGCTGTCGAGAAAGCACCAGGATGGATAGAAGATGTTTTGCCATTCTATGTAGTCTGTTGAGAACGACGTCCGGGTTGGTGGGAACGGAAATCGT
AGACGTGGAAGAGATGGTCGCGATGTTCTTGCACATCATTGCTCATGATGTTAAGAATCAAGTCATTAGAAGACAGTTTGCACGGTCGGGCGAAACCGTTTCTCGACACT
TCAACACGACTTTGAGTGCCGTACTACGATTGTACGACGTTCTACTTAAGAAACCTGAACCGATCACGACTTCTTGCCAAGATGGGAGACTAATGGCAGGTGCAGATAAA
CAACAGAAGCACATCTGGACGAGGCAGGAGGAGGCACGGTTGGTGGAATCCCTCGTGGAGCTCGTCCACGAAGGTGGATGGAGAGGGGACAACGGGACCTTCAGGGTCGG
ATACCTAGCCCGACTGAAGCAGATGATAAAAGATAAAATGCTGACCTGCACCATAGAGTCAACGTCCGTAATAGACTGCAAGGTGCGGTCCTTGAAACGGCAATACAGTG
CCATCTCGGAGATGCTGGGTCCGGGCTGCAGTGGATTTGTTTGGAATGATGAGTTTAAATGCATCCAGGCTGAGAGGGAGGTATATGATGCATGGGTGAAGTCACACTCA
GCCGCGAAGGGGCTGCTGAACAAGCCATTTCCTCATTACGAGGATCTTGCTTTCGTTTTCGGCAAAGACAGGGCGAGTGGCGGCGCGTGTAATGTTCCAGCGGAACAGGC
AGACAGCACCCACGGGGACGACGAAGGTGATCAGAATGTCCAGGCGGAACAGGATTGTTACGTCCCCGCCCCTCCAGACATTAATCTGGCCGCGGACATGGACTTCGAGG
ACGTCCCCATCACACCGACAAGCCGACCAAGCACTGTAGGGTCCTCCCATAGTTGA
Protein sequenceShow/hide protein sequence
MGTSKLYVVFVGRNPGIYTSWVDCHKQVNQFKGALHKSYPTFPEAEYAFRQYVTGTRGEANLVDQHDACRNLPVGGYGTVGKCYSISRMIENQTPYLRHQIRQLACFRLI
HESDLCCRESTRMDRRCFAILCSLLRTTSGLVGTEIVDVEEMVAMFLHIIAHDVKNQVIRRQFARSGETVSRHFNTTLSAVLRLYDVLLKKPEPITTSCQDGRLMAGADK
QQKHIWTRQEEARLVESLVELVHEGGWRGDNGTFRVGYLARLKQMIKDKMLTCTIESTSVIDCKVRSLKRQYSAISEMLGPGCSGFVWNDEFKCIQAEREVYDAWVKSHS
AAKGLLNKPFPHYEDLAFVFGKDRASGGACNVPAEQADSTHGDDEGDQNVQAEQDCYVPAPPDINLAADMDFEDVPITPTSRPSTVGSSHS