; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030699 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030699
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationscaffold11:29753313..29754528
RNA-Seq ExpressionSpg030699
SyntenySpg030699
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.2e-2431.03Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI----------------------------------DADGDMAPDYMDWYENITRRFITREGASYGQ
        W+DQFCVT  ATHV+ QYRYMFDLL+ D +   P                                     D D+  +Y+ WY NITR +ITR  A+ G 
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI----------------------------------DADGDMAPDYMDWYENITRRFITREGASYGQ

Query:  ARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEHIPVQEHFPPVVP
         RS   R+RD+++D  Q+LN+CN+    ME++H MY++ I  PP  R R   RV+E ++                                         
Subjt:  ARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEHIPVQEHFPPVVP

Query:  EEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHD-------YEAGPSSSSAY-----------GRGRGRGEHAQYVYPTELVEEPR
        +E +HNVE++PP TQTQ   G  +P+  +P     ++D       Y+AG S SS Y           G  RG GEH +Y+     +   R
Subjt:  EEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHD-------YEAGPSSSSAY-----------GRGRGRGEHAQYVYPTELVEEPR

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.7e-2332.3Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDI
        D D+  +Y+ WY NITR +ITR GA+ G++ +   R+RD+++D+ Q L++CN+ +  ME++H MY++PI   P P  R   RV+E ++            
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDI

Query:  PVQPYIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAYGRGR
                                     ++ +HNVE++P  TQTQ   G   P T + T    + D+E G                  PS+S  +G  R
Subjt:  PVQPYIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAYGRGR

Query:  GRGEHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
        G GEH +Y+Y           E  +EP  +ED +    ++RRRQP RNRRRP CGTH
Subjt:  GRGEHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.0e-2632.06Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKP------DLVP----TSPI------------------------------------DADGDMAPDYMDWYENITR
        WRDQFCVT SATHV+ QYRYMFDLL+P        VP    T P+                                      D D+  +Y+ WY+NI++
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKP------DLVP----TSPI------------------------------------DADGDMAPDYMDWYENITR

Query:  RFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEH
         +IT+ GA+    RS   R+R++++D+ Q+LN+CN  +  ME +HYMY++PI   P  +RR    VQE D  ++E     E++P     P+ +     EH
Subjt:  RFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEH

Query:  ---IPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY-------PTELVEEPREEEDPDDQV
            PV    P      +   V     F +    +            ++D  + PSSS  +  GRGRGEH +Y+Y       P +  E+   E+  +  V
Subjt:  ---IPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY-------PTELVEEPREEEDPDDQV

Query:  P--------------------RARRRQPARNRRRPPCGTH
        P                    ++RRRQPARNRRRP CGTH
Subjt:  P--------------------RARRRQPARNRRRPPCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]4.4e-2930.59Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI-----------------------------------------------------------DADGDM
        WRDQFCV  SAT+V+ QYRYMFDLL+ D +   P                                                              D D+
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI-----------------------------------------------------------DADGDM

Query:  APDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQP
          +Y+  Y NITR +ITR GA  G  RS   R+RD+  D  Q+L++CN+ +  ME++H +Y++PI  PP  R R   RV+E ++                
Subjt:  APDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQP

Query:  YIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAYGRGRGRGE
                                 +E +HNVE++PP TQTQ   G  +P+  +P     Y                     + GPS+S  YG GRG GE
Subjt:  YIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAYGRGRGRGE

Query:  HAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
        H +Y+Y   PT      E  +EP+ +ED +    ++RRRQPARNR+   CGTH
Subjt:  HAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.5e-2430.06Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKPD--------------------------LVP----TSPI-----------------------------------
        WRDQFCVT SATHV+ QYRYMFDLL+P                            VP    T P+                                   
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKPD--------------------------LVP----TSPI-----------------------------------

Query:  -DADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQ
           D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D  Q+LN+CN  +  ME +HYMY++PI   P P +RR   VQE D  ++E     
Subjt:  -DADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQ

Query:  EDIPVQPYIPVYEDVPVQEHIPVQE--HFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY------
        E++P     P+ +     EH  V      P      +   V     F +    +            ++D  + PSSS  +G GRGRGEH +Y+Y      
Subjt:  EDIPVQPYIPVYEDVPVQEHIPVQE--HFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY------

Query:  ----------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH
                        P +  E+ ++E  E+   Q  + RRRQ A+NR+RP CGTH
Subjt:  ----------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.6e-2431.03Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI----------------------------------DADGDMAPDYMDWYENITRRFITREGASYGQ
        W+DQFCVT  ATHV+ QYRYMFDLL+ D +   P                                     D D+  +Y+ WY NITR +ITR  A+ G 
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI----------------------------------DADGDMAPDYMDWYENITRRFITREGASYGQ

Query:  ARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEHIPVQEHFPPVVP
         RS   R+RD+++D  Q+LN+CN+    ME++H MY++ I  PP  R R   RV+E ++                                         
Subjt:  ARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEHIPVQEHFPPVVP

Query:  EEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHD-------YEAGPSSSSAY-----------GRGRGRGEHAQYVYPTELVEEPR
        +E +HNVE++PP TQTQ   G  +P+  +P     ++D       Y+AG S SS Y           G  RG GEH +Y+     +   R
Subjt:  EEFHHNVEDMPPFTQTQDGAGPSTPVMTIP---PSWHD-------YEAGPSSSSAY-----------GRGRGRGEHAQYVYPTELVEEPR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-2332.3Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDI
        D D+  +Y+ WY NITR +ITR GA+ G++ +   R+RD+++D+ Q L++CN+ +  ME++H MY++PI   P P  R   RV+E ++            
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDI

Query:  PVQPYIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAYGRGR
                                     ++ +HNVE++P  TQTQ   G   P T + T    + D+E G                  PS+S  +G  R
Subjt:  PVQPYIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAG---PSTPVMTIPPSWHDYEAG------------------PSSSSAYGRGR

Query:  GRGEHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
        G GEH +Y+Y           E  +EP  +ED +    ++RRRQP RNRRRP CGTH
Subjt:  GRGEHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X19.8e-2732.06Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKP------DLVP----TSPI------------------------------------DADGDMAPDYMDWYENITR
        WRDQFCVT SATHV+ QYRYMFDLL+P        VP    T P+                                      D D+  +Y+ WY+NI++
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKP------DLVP----TSPI------------------------------------DADGDMAPDYMDWYENITR

Query:  RFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEH
         +IT+ GA+    RS   R+R++++D+ Q+LN+CN  +  ME +HYMY++PI   P  +RR    VQE D  ++E     E++P     P+ +     EH
Subjt:  RFITREGASYGQARSCFRRIRDLSEDM-QILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEH

Query:  ---IPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY-------PTELVEEPREEEDPDDQV
            PV    P      +   V     F +    +            ++D  + PSSS  +  GRGRGEH +Y+Y       P +  E+   E+  +  V
Subjt:  ---IPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY-------PTELVEEPREEEDPDDQV

Query:  P--------------------RARRRQPARNRRRPPCGTH
        P                    ++RRRQPARNRRRP CGTH
Subjt:  P--------------------RARRRQPARNRRRPPCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.1e-2930.59Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI-----------------------------------------------------------DADGDM
        WRDQFCV  SAT+V+ QYRYMFDLL+ D +   P                                                              D D+
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPI-----------------------------------------------------------DADGDM

Query:  APDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQP
          +Y+  Y NITR +ITR GA  G  RS   R+RD+  D  Q+L++CN+ +  ME++H +Y++PI  PP  R R   RV+E ++                
Subjt:  APDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQEDIPVQP

Query:  YIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAYGRGRGRGE
                                 +E +HNVE++PP TQTQ   G  +P+  +P     Y                     + GPS+S  YG GRG GE
Subjt:  YIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDY---------------------EAGPSSSSAYGRGRGRGE

Query:  HAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH
        H +Y+Y   PT      E  +EP+ +ED +    ++RRRQPARNR+   CGTH
Subjt:  HAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.7e-2430.06Show/hide
Query:  WRDQFCVTGSATHVLIQYRYMFDLLKPD--------------------------LVP----TSPI-----------------------------------
        WRDQFCVT SATHV+ QYRYMFDLL+P                            VP    T P+                                   
Subjt:  WRDQFCVTGSATHVLIQYRYMFDLLKPD--------------------------LVP----TSPI-----------------------------------

Query:  -DADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQ
           D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D  Q+LN+CN  +  ME +HYMY++PI   P P +RR   VQE D  ++E     
Subjt:  -DADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MQILNLCNSGDANMEQLHYMYNIPIAHPPGPRRRRGARVQEEDVPVQEDIPVQ

Query:  EDIPVQPYIPVYEDVPVQEHIPVQE--HFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY------
        E++P     P+ +     EH  V      P      +   V     F +    +            ++D  + PSSS  +G GRGRGEH +Y+Y      
Subjt:  EDIPVQPYIPVYEDVPVQEHIPVQE--HFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEHAQYVY------

Query:  ----------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH
                        P +  E+ ++E  E+   Q  + RRRQ A+NR+RP CGTH
Subjt:  ----------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRRPPCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAGAGACCAATTTTGTGTGACTGGATCAGCTACACATGTATTGATCCAGTATAGATACATGTTTGACCTTCTAAAACCTGATCTGGTACCAACTTCTCCAATAGATGC
TGATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCATATGGTCAAGCGAGGTCATGCTTCAGACGCA
TCCGTGATCTCTCTGAGGATATGCAGATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACATCCTCCTGGA
CCTAGGCGTAGAAGAGGTGCTCGTGTCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCCGGTACAAGAGGATATTCCAGTACAACCTTATATTCCAGTATATGAGGA
TGTTCCAGTACAGGAGCATATCCCAGTCCAGGAGCATTTCCCACCAGTTGTACCGGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATG
GTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTTACGGACGTGGACGTGGACGTGGAGAGCAT
GCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCCAGGGAAGAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACG
TCCGCCTTGTGGCACACATTAG
mRNA sequenceShow/hide mRNA sequence
TGGAGAGACCAATTTTGTGTGACTGGATCAGCTACACATGTATTGATCCAGTATAGATACATGTTTGACCTTCTAAAACCTGATCTGGTACCAACTTCTCCAATAGATGC
TGATGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCATATGGTCAAGCGAGGTCATGCTTCAGACGCA
TCCGTGATCTCTCTGAGGATATGCAGATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACATCCTCCTGGA
CCTAGGCGTAGAAGAGGTGCTCGTGTCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCCGGTACAAGAGGATATTCCAGTACAACCTTATATTCCAGTATATGAGGA
TGTTCCAGTACAGGAGCATATCCCAGTCCAGGAGCATTTCCCACCAGTTGTACCGGAAGAATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATG
GTGCTGGTCCGTCCACTCCAGTGATGACTATTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCTTACGGACGTGGACGTGGACGTGGAGAGCAT
GCACAATATGTATACCCTACAGAGCTTGTAGAGGAACCCAGGGAAGAGGAGGATCCAGATGATCAGGTACCGAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGGCGACG
TCCGCCTTGTGGCACACATTAG
Protein sequenceShow/hide protein sequence
WRDQFCVTGSATHVLIQYRYMFDLLKPDLVPTSPIDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDMQILNLCNSGDANMEQLHYMYNIPIAHPPG
PRRRRGARVQEEDVPVQEDIPVQEDIPVQPYIPVYEDVPVQEHIPVQEHFPPVVPEEFHHNVEDMPPFTQTQDGAGPSTPVMTIPPSWHDYEAGPSSSSAYGRGRGRGEH
AQYVYPTELVEEPREEEDPDDQVPRARRRQPARNRRRPPCGTH