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Spg030706 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030706
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCarotenoid cleavage dioxygenase 1
Genome locationscaffold11:28888917..28889950
RNA-Seq ExpressionSpg030706
SyntenySpg030706
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7117295.1 hypothetical protein RHSIM_RhsimMtG0004300 [Rhododendron simsii]2.1e-1083.33Show/hide
Query:  TRNYYVRDSSSTDVENAPVFHSHMRPESLLATGRHEVIYHAQ
        ++NYY RDSSSTD ENAPV HSHMRPESLLATGRHE+I+HAQ
Subjt:  TRNYYVRDSSSTDVENAPVFHSHMRPESLLATGRHEVIYHAQ
QGW48285.1 hypothetical protein [Raphanus sativus]2.6e-0881.4Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
        MVVYQPPVLELPVPI+AYRSVN FVCIATS VLV+SR   F G
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
TYG73547.1 hypothetical protein ES288_D04G110500v1 [Gossypium darwinii]3.9e-0986.05Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
        MVVYQPPVLELPVPI+AYRSVN FVCIATSVVLVVSR   F G
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
TYH76662.1 hypothetical protein ES332_D04G101000v1 [Gossypium tomentosum]1.1e-0883.72Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
        MVVYQPPVL+LPVPI+AYRSVN FVCIATSVVLVVSR   F G
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
YP_004222387.1 hypothetical protein BevumaM_p154 [Beta vulgaris subsp. maritima]6.7e-0974Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLGTWSTRNY
        MVVYQPPVLELPVPI+AYRSVNGFV IATSVVLVVSR   F G    + +
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLGTWSTRNY
TrEMBL top hitse value%identityAlignment
A0A5D2CV41 Uncharacterized protein1.9e-0986.05Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
        MVVYQPPVLELPVPI+AYRSVN FVCIATSVVLVVSR   F G
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
A0A5D2LCA8 Uncharacterized protein5.6e-0983.72Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
        MVVYQPPVL+LPVPI+AYRSVN FVCIATSVVLVVSR   F G
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
A0A650GB44 Uncharacterized protein1.2e-0881.4Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
        MVVYQPPVLELPVPI+AYRSVN FVCIATS VLV+SR   F G
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLG
E6ZDV5 Uncharacterized protein orf99g3.3e-0974Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLGTWSTRNY
        MVVYQPPVLELPVPI+AYRSVNGFV IATSVVLVVSR   F G    + +
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLGTWSTRNY
G2XM07 Uncharacterized protein3.3e-0974Show/hide
Query:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLGTWSTRNY
        MVVYQPPVLELPVPI+AYRSVNGFV IATSVVLVVSR   F G    + +
Subjt:  MVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNIFFLGTWSTRNY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTGCATCCCGAGGACTTTCTTGATTGAAAAAGTAGCGTGGAAAAGTTCTTTGATTGGAAAGAACGAGACGAGGTATGCAAAGATGAAATTCCTGAGCACGAG
TAATGCCTCAATTTGGTGGGATCAAGTCCAAGGGGGAGAGAAGCGTACAAGAAAGCCCCTGCTCCTAACAAGTTGCGGAGTTCTACCAATTGTTTATTCGCAATGGCTTG
AACGAATCCGACGAAGAATCCCTTGCTTGATAGGGCTTGAGGTTCGAAATCCAAGATTAAATCTCAATGCATCAGATGTGGAAAGTGGTCTATCAACTAGCTCTAACTCT
AAAGGCCGAGGAAAAGCTAAAAAGAAGGACCACAAGGAGGCACCGAAGTTTCAAAAGTCGACGGCTCCATCCTACTCGTTGCCCAGAGTCGTCGACTTGAGCATTGTACA
AGTGCTTAAGGCTCCTTGGGGCCGTGGTAACAAACTACGCGAGCCTCCCAACGAAGCCAACAGAAATCCTATCCGAATAAAAAAAATAAAAGGCAGTTTCATTATGGTGG
TATACCAGCCGCCCGTTCTGGAACTTCCAGTTCCAATCGATGCATATAGATCCGTAAATGGATTTGTATGTATAGCTACTTCAGTCGTGCTCGTCGTTTCTCGAAATATC
TTTTTTCTGGGAACATGGTCAACCAGAAATTATTATGTTCGTGATTCGTCATCCACTGATGTAGAAAATGCTCCAGTTTTCCATTCTCATATGAGGCCGGAAAGTTTATT
GGCAACTGGTCGACACGAAGTGATTTATCATGCTCAAAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTGCATCCCGAGGACTTTCTTGATTGAAAAAGTAGCGTGGAAAAGTTCTTTGATTGGAAAGAACGAGACGAGGTATGCAAAGATGAAATTCCTGAGCACGAG
TAATGCCTCAATTTGGTGGGATCAAGTCCAAGGGGGAGAGAAGCGTACAAGAAAGCCCCTGCTCCTAACAAGTTGCGGAGTTCTACCAATTGTTTATTCGCAATGGCTTG
AACGAATCCGACGAAGAATCCCTTGCTTGATAGGGCTTGAGGTTCGAAATCCAAGATTAAATCTCAATGCATCAGATGTGGAAAGTGGTCTATCAACTAGCTCTAACTCT
AAAGGCCGAGGAAAAGCTAAAAAGAAGGACCACAAGGAGGCACCGAAGTTTCAAAAGTCGACGGCTCCATCCTACTCGTTGCCCAGAGTCGTCGACTTGAGCATTGTACA
AGTGCTTAAGGCTCCTTGGGGCCGTGGTAACAAACTACGCGAGCCTCCCAACGAAGCCAACAGAAATCCTATCCGAATAAAAAAAATAAAAGGCAGTTTCATTATGGTGG
TATACCAGCCGCCCGTTCTGGAACTTCCAGTTCCAATCGATGCATATAGATCCGTAAATGGATTTGTATGTATAGCTACTTCAGTCGTGCTCGTCGTTTCTCGAAATATC
TTTTTTCTGGGAACATGGTCAACCAGAAATTATTATGTTCGTGATTCGTCATCCACTGATGTAGAAAATGCTCCAGTTTTCCATTCTCATATGAGGCCGGAAAGTTTATT
GGCAACTGGTCGACACGAAGTGATTTATCATGCTCAAAGATGA
Protein sequenceShow/hide protein sequence
MADCIPRTFLIEKVAWKSSLIGKNETRYAKMKFLSTSNASIWWDQVQGGEKRTRKPLLLTSCGVLPIVYSQWLERIRRRIPCLIGLEVRNPRLNLNASDVESGLSTSSNS
KGRGKAKKKDHKEAPKFQKSTAPSYSLPRVVDLSIVQVLKAPWGRGNKLREPPNEANRNPIRIKKIKGSFIMVVYQPPVLELPVPIDAYRSVNGFVCIATSVVLVVSRNI
FFLGTWSTRNYYVRDSSSTDVENAPVFHSHMRPESLLATGRHEVIYHAQR