; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030710 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030710
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionrho GTPase-activating protein gacH
Genome locationscaffold11:30621070..30622867
RNA-Seq ExpressionSpg030710
SyntenySpg030710
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR036020 - WW domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597689.1 hypothetical protein SDJN03_10869, partial [Cucurbita argyrosperma subsp. sororia]7.3e-6672.28Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH--AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
        MS  PNMATITAALERSLQ CSLS H+    D H      PNSSSS         LLQP TTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH--AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED

Query:  PRSTSEDQYSEDYYYYSDDDDSSYDSE----ESSNNNNNNNNNFGNMEAQQEEEDH----VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEND
        PRS +ED YSEDYYY  DDDD   DS     ESSNNNN NN N+  ME Q+EEE+     VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSEN+
Subjt:  PRSTSEDQYSEDYYYYSDDDDSSYDSE----ESSNNNNNNNNNFGNMEAQQEEEDH----VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEND

Query:  IP
        IP
Subjt:  IP

KAG7029133.1 hypothetical protein SDJN02_10318 [Cucurbita argyrosperma subsp. argyrosperma]8.6e-6772.77Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH--AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
        MST PNMATITAALERSLQ CSLS H+    D H      PNSSSS         LLQP TTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH--AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED

Query:  PRSTSEDQYSEDYYYYSDDDDSSYDSE----ESSNNNNNNNNNFGNMEAQQEEEDH----VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEND
        PRS +ED YSEDYYY  DDDD   DS+    ESSNNNN NN N+  ME Q+EEE+     VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSEN+
Subjt:  PRSTSEDQYSEDYYYYSDDDDSSYDSE----ESSNNNNNNNNNFGNMEAQQEEEDH----VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSEND

Query:  IP
        IP
Subjt:  IP

XP_022932700.1 rho GTPase-activating protein gacH [Cucurbita moschata]5.2e-6472.22Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH-AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP
        MST PNMATITAALERSLQ CSLS  +      H     PNSSSS         LLQP TTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH-AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP

Query:  RSTSEDQYSEDYYYYSDDDDSSYD--SEESSNNNNNNNNNFGNMEAQQEEEDH---VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP
        R  +ED YSEDYYY  DDDD   D  S ESSNNNN N  N+  ME Q+EEE+    VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSEN+IP
Subjt:  RSTSEDQYSEDYYYYSDDDDSSYD--SEESSNNNNNNNNNFGNMEAQQEEEDH---VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP

XP_022972321.1 uncharacterized protein LOC111470894 [Cucurbita maxima]1.6e-6873.04Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS------HHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMK
        MST PNMATITAALERSLQ CSLS      HH       HA   PNSSSS        HLLQP TTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMK
Subjt:  MSTAPNMATITAALERSLQKCSLS------HHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMK

Query:  AKEDPRSTSEDQYSEDYYYYSDDDDSSYDSEESSNNNNNNNNNFGNMEAQ------QEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE
        AKEDPRS +ED YSEDYYY+ DDDDS   S ESSNNNN NN N+  ME Q      +EEE+ VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSE
Subjt:  AKEDPRSTSEDQYSEDYYYYSDDDDSSYDSEESSNNNNNNNNNFGNMEAQ------QEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE

Query:  NDIP
        N+IP
Subjt:  NDIP

XP_023540596.1 histone chaperone RTT106-like isoform X1 [Cucurbita pepo subsp. pepo]9.5e-6673.37Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH--AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED
        MST PNMATITAALERSLQ CSLS H+    D H      PNSSSS         LLQP TTLDLNSHISLP HWEQCLDLKTGEIYYINWRNGMKAKED
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH--AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKED

Query:  PRSTSEDQYSEDYYYYSDDDDSSYD--SEESSNNNNNNNNNFGNMEAQQEEEDH---VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP
        PRS +ED YSEDYYY  DDDD   D  S ESSNNNN NN N+  ME Q+EEE+    VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSEN+IP
Subjt:  PRSTSEDQYSEDYYYYSDDDDSSYD--SEESSNNNNNNNNNFGNMEAQQEEEDH---VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP

TrEMBL top hitse value%identityAlignment
A0A6J1F2V9 rho GTPase-activating protein gacH2.5e-6472.22Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH-AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP
        MST PNMATITAALERSLQ CSLS  +      H     PNSSSS         LLQP TTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQAVSSDSH-AGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDP

Query:  RSTSEDQYSEDYYYYSDDDDSSYD--SEESSNNNNNNNNNFGNMEAQQEEEDH---VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP
        R  +ED YSEDYYY  DDDD   D  S ESSNNNN N  N+  ME Q+EEE+    VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSEN+IP
Subjt:  RSTSEDQYSEDYYYYSDDDDSSYD--SEESSNNNNNNNNNFGNMEAQQEEEDH---VLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP

A0A6J1GTR7 uncharacterized protein LOC111457490 isoform X21.5e-6170.35Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQA---VSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MS AP MAT+TAALERSL+ CSLSH QA   V SDSH G+              TH       L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQA---VSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRSTSE-DQYSEDYYYYS---DDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP
        DPR T+E DQYS+DYY YS   DDDDSSYDSEESS  ++NN N   NME QQEE+  VLVVAGCK CLMYFMVPKHLE+CPKCS+G+LLHFDRSENDIP
Subjt:  DPRSTSE-DQYSEDYYYYS---DDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP

A0A6J1GTV5 protein Tube-like isoform X12.9e-6066.67Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQA---VSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MS AP MAT+TAALERSL+ CSLSH QA   V SDSH G+              TH       L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQA---VSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRSTSE-DQYSEDYYYYS--------------DDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLL
        DPR T+E DQYS+DYY YS              DDDDSSYDSEESS  ++NN N   NME QQEE+  VLVVAGCK CLMYFMVPKHLE+CPKCS+G+LL
Subjt:  DPRSTSE-DQYSEDYYYYS--------------DDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLL

Query:  HFDRSENDIP
        HFDRSENDIP
Subjt:  HFDRSENDIP

A0A6J1I5N3 uncharacterized protein LOC1114708947.6e-6973.04Show/hide
Query:  MSTAPNMATITAALERSLQKCSLS------HHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMK
        MST PNMATITAALERSLQ CSLS      HH       HA   PNSSSS        HLLQP TTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMK
Subjt:  MSTAPNMATITAALERSLQKCSLS------HHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMK

Query:  AKEDPRSTSEDQYSEDYYYYSDDDDSSYDSEESSNNNNNNNNNFGNMEAQ------QEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE
        AKEDPRS +ED YSEDYYY+ DDDDS   S ESSNNNN NN N+  ME Q      +EEE+ VLVVAGCKSCLMYFMVPK +EDCPKCS GQLLHFDRSE
Subjt:  AKEDPRSTSEDQYSEDYYYYSDDDDSSYDSEESSNNNNNNNNNFGNMEAQ------QEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE

Query:  NDIP
        N+IP
Subjt:  NDIP

A0A6J1IQL3 methionine aminopeptidase 2-like2.2e-6068.14Show/hide
Query:  MSTAPNMATITAALERSLQKCSLSHHQA---VSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE
        MS  P MAT+TAALERSLQ CSLSH QA   V SDSH G+              TH       L LNSH+SLPYHWEQCLDLKTGEIYYINWRNGMKAKE
Subjt:  MSTAPNMATITAALERSLQKCSLSHHQA---VSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKE

Query:  DPRSTSE-DQYSEDYYYYS--------DDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE
        DPR T+E DQYS+DYY YS        DDDDSSYDSEESS  ++NN N   NME QQEE+  VLVVAGCK CLMYFMVPKHLE+CPKCS+G+LL+FDRSE
Subjt:  DPRSTSE-DQYSEDYYYYS--------DDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSE

Query:  NDIP
        NDIP
Subjt:  NDIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G28070.1 unknown protein4.0e-3044.33Show/hide
Query:  MATITAALERSLQKCSLSHHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-STSED
        MA IT  LERS+Q CSL   +             SS          H+      L+L+SH S+P H EQCLDLKTGEIYY +W +GM+ KEDPR S S  
Subjt:  MATITAALERSLQKCSLSHHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPR-STSED

Query:  QY-------SEDYYYYSDDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP
         Y       S    + S++  S Y+SEESS+ ++ ++  +     ++E+++ VLVVAGCK+CLMYFMVPK  +DCPKC+T QLLHFD+  +  P
Subjt:  QY-------SEDYYYYSDDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP

AT2G33510.1 CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202)4.3e-4052.88Show/hide
Query:  APNMATITAALERSLQKCSLSHHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-
        APNM TIT +LE+S+  CSL       +D     + +    S+SN   T +     TL+LNSH+SLP HWEQCLDLKTGEIYYINW+NGM+ KEDPR   
Subjt:  APNMATITAALERSLQKCSLSHHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRST-

Query:  SEDQYSEDYY--YYSDDDDSSYDSEESSNNNN-----NNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDR
        + D  S D Y    S++D S YDSEESS+ ++     N+       E ++EEE+ VLVVAGCK+C MYFMVPK +EDCPKC+  QLLHFDR
Subjt:  SEDQYSEDYY--YYSDDDDSSYDSEESSNNNN-----NNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDR

AT2G33510.2 unknown protein4.4e-3749.03Show/hide
Query:  APNMATITAALERSLQKCSLSHHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLK---------------TGEIYYIN
        APNM TIT +LE+S+  CSL       +D     + +    S+SN   T +     TL+LNSH+SLP HWEQCLDLK               TGEIYYIN
Subjt:  APNMATITAALERSLQKCSLSHHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLK---------------TGEIYYIN

Query:  WRNGMKAKEDPRST-SEDQYSEDYY--YYSDDDDSSYDSEESSNNNN-----NNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQ
        W+NGM+ KEDPR   + D  S D Y    S++D S YDSEESS+ ++     N+       E ++EEE+ VLVVAGCK+C MYFMVPK +EDCPKC+  Q
Subjt:  WRNGMKAKEDPRST-SEDQYSEDYY--YYSDDDDSSYDSEESSNNNN-----NNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQ

Query:  LLHFDR
        LLHFDR
Subjt:  LLHFDR

AT3G52561.1 unknown protein4.5e-0548.72Show/hide
Query:  EEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHF
        EEE   +VV GC+SC+MY MV +  + CPKC    L+ F
Subjt:  EEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACAGCTCCAAATATGGCCACAATCACTGCCGCTTTAGAACGCTCTCTCCAGAAGTGCTCTTTAAGCCATCACCAAGCTGTTTCTTCTGATTCTCATGCCGGTGC
CCTTCCTAATTCCTCTTCTTCTTCTAATTCTAATGGACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCTCACATCTCTCTTCCTTACCACTGGG
AGCAGTGTCTTGATTTAAAGACAGGGGAGATATACTACATAAACTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCCACCTCAGAAGATCAATATAGTGAAGAT
TACTACTACTACTCGGACGACGACGACAGCTCTTACGACAGCGAAGAGTCGTCGAACAATAACAACAACAATAACAACAACTTTGGAAACATGGAAGCACAGCAAGAAGA
AGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCCTGATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTCAGCTTCTTCATT
TTGATCGCTCTGAAAATGACATTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTACAGCTCCAAATATGGCCACAATCACTGCCGCTTTAGAACGCTCTCTCCAGAAGTGCTCTTTAAGCCATCACCAAGCTGTTTCTTCTGATTCTCATGCCGGTGC
CCTTCCTAATTCCTCTTCTTCTTCTAATTCTAATGGACAACAAACTCATCTTCTTCAACCTCAAACCACTTTGGACCTCAACTCTCACATCTCTCTTCCTTACCACTGGG
AGCAGTGTCTTGATTTAAAGACAGGGGAGATATACTACATAAACTGGAGGAATGGAATGAAGGCAAAGGAAGATCCAAGGTCCACCTCAGAAGATCAATATAGTGAAGAT
TACTACTACTACTCGGACGACGACGACAGCTCTTACGACAGCGAAGAGTCGTCGAACAATAACAACAACAATAACAACAACTTTGGAAACATGGAAGCACAGCAAGAAGA
AGAAGATCATGTTTTGGTGGTTGCAGGTTGCAAGAGCTGCCTGATGTATTTTATGGTGCCCAAACATCTTGAAGATTGCCCTAAATGCAGTACTGGTCAGCTTCTTCATT
TTGATCGCTCTGAAAATGACATTCCATGA
Protein sequenceShow/hide protein sequence
MSTAPNMATITAALERSLQKCSLSHHQAVSSDSHAGALPNSSSSSNSNGQQTHLLQPQTTLDLNSHISLPYHWEQCLDLKTGEIYYINWRNGMKAKEDPRSTSEDQYSED
YYYYSDDDDSSYDSEESSNNNNNNNNNFGNMEAQQEEEDHVLVVAGCKSCLMYFMVPKHLEDCPKCSTGQLLHFDRSENDIP