; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030722 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030722
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold11:29970998..29975414
RNA-Seq ExpressionSpg030722
SyntenySpg030722
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016747093.1 uncharacterized protein LOC107955807 [Gossypium hirsutum]2.8e-0933.69Show/hide
Query:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP
        Q+  + +GN F PGWRDHPN  + N         P          +L   V+ L   Q K+Q +TQ+ +Q++   ISQLA TV +LE++  +LP   E  
Subjt:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP

Query:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISH---SSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGVKLNVLSAF
         +E V A+T RSGTV+S      P+       D SL S    SSP      IP P    Y  P    G + +R D +  +  +L  F
Subjt:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISH---SSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGVKLNVLSAF

XP_021734953.1 uncharacterized protein LOC110701647 [Chenopodium quinoa]2.8e-0933.1Show/hide
Query:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQH--------------------GPNLGIL--EILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQ
        Q+  D F N + PGWRDHPN  + N+Q    QH                      N G +  E ++++L+ +V  +Q+  +++Q+ET++ +Q L   +SQ
Subjt:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQH--------------------GPNLGIL--EILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQ

Query:  LADTVSKLEAK-IDKLPVCPEIPRKEEVCAVTSRSGTVLSSS
        ++  VS+LEAK   KLP   E+  K++V A+T RSG  L  +
Subjt:  LADTVSKLEAK-IDKLPVCPEIPRKEEVCAVTSRSGTVLSSS

XP_031091054.1 uncharacterized protein LOC115996048 [Ipomoea triloba]7.3e-1037.08Show/hide
Query:  DQFGNNFYPGWRDHPNYYFQN--------NQSLNMQHGP--------NLGI-LEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLE
        D+F N + PGWRDHPN  + N        NQ+      P        N G+ L+ +VK L+++ Q       ++Q+ET+AG+QQLG  ISQLA +V KLE
Subjt:  DQFGNNFYPGWRDHPNYYFQN--------NQSLNMQHGP--------NLGI-LEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLE

Query:  AKID-KLPVCPEIPRKEEVCAVTSRSGTVL--------------SSSPQNSSFPCWDCSLISHSSPLLDASSIPFPFP
        A+   KLP+  E+  KE V A+T RSG  L               S  +N S    +  + S SS     SS+P PFP
Subjt:  AKID-KLPVCPEIPRKEEVCAVTSRSGTVL--------------SSSPQNSSFPCWDCSLISHSSPLLDASSIPFPFP

XP_031108596.1 uncharacterized protein LOC116013076 [Ipomoea triloba]7.3e-1036.84Show/hide
Query:  DQFGNNFYPGWRDHPNYYFQN--------NQSLNMQHGPNLGILEILVKNLS--DSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAK-IDKL
        D F N + PGWRDHPN  + N        NQ+      P     + L   +S  +  + L     ++Q+ET+AG+QQLG  ISQLA +VSKLEA+ + KL
Subjt:  DQFGNNFYPGWRDHPNYYFQN--------NQSLNMQHGPNLGILEILVKNLS--DSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAK-IDKL

Query:  PVCPEIPRKEEVCAVTSRSGTVL--------------SSSPQNSSFPCWDCSLISHSSPLLDASSIPFPFP
        P   E+  KE V A+T RSG  L               S  +N S    +  + S SS     SS+P PFP
Subjt:  PVCPEIPRKEEVCAVTSRSGTVL--------------SSSPQNSSFPCWDCSLISHSSPLLDASSIPFPFP

XP_031131881.1 uncharacterized protein LOC116033267 [Ipomoea triloba]1.6e-0936.84Show/hide
Query:  DQFGNNFYPGWRDHPNYYFQN--------NQSLNMQHGPNLGILEILVKNLS--DSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKID-KL
        D F N + PGWRDHPN  + N        NQ+      P     +     +S  + V+ L     ++Q+ET AG+QQLG  ISQLA +VSKLEA+   KL
Subjt:  DQFGNNFYPGWRDHPNYYFQN--------NQSLNMQHGPNLGILEILVKNLS--DSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKID-KL

Query:  PVCPEIPRKEEVCAVTSRSGTVL--------------SSSPQNSSFPCWDCSLISHSSPLLDASSIPFPFP
        P   E+  KE V A+T RSG  L               S  +N S    +  + S SS     SS+P PFP
Subjt:  PVCPEIPRKEEVCAVTSRSGTVL--------------SSSPQNSSFPCWDCSLISHSSPLLDASSIPFPFP

TrEMBL top hitse value%identityAlignment
A0A1U8P9X9 uncharacterized protein LOC1079558071.3e-0933.69Show/hide
Query:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP
        Q+  + +GN F PGWRDHPN  + N         P          +L   V+ L   Q K+Q +TQ+ +Q++   ISQLA TV +LE++  +LP   E  
Subjt:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP

Query:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISH---SSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGVKLNVLSAF
         +E V A+T RSGTV+S      P+       D SL S    SSP      IP P    Y  P    G + +R D +  +  +L  F
Subjt:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISH---SSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGVKLNVLSAF

A0A6I9UJL5 uncharacterized protein LOC1051787473.9e-0940.46Show/hide
Query:  QNQQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQH------------GPNLGI-LEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSK
        Q Q+  D F N F PGWRDHPN  +  NQ  N Q              PN G+ LE +VK L+ S Q LQ+G  K+Q+ET++ +Q L + +SQLA +VS+
Subjt:  QNQQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQH------------GPNLGI-LEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSK

Query:  LEAKIDKLPVCPEIPRKEEVCAVTSRSGTVL
        LE++  K P    I   + V A+   SG  L
Subjt:  LEAKIDKLPVCPEIPRKEEVCAVTSRSGTVL

A0A6P4M312 uncharacterized protein LOC1084552023.0e-0934.46Show/hide
Query:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP
        Q+  + +GN F PGWRDHPN  + N         P          +L   V+ L   Q K+Q +TQ+ +Q++   ISQLA TV +LE++  +LP   E  
Subjt:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP

Query:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSL---ISHSSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSR
         +E V A+T RSGTV+S      P+       D SL   +  SSP      IP      Y+ P  VLG + +R D +
Subjt:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSL---ISHSSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSR

A0A6P4N313 uncharacterized protein LOC1084623473.0e-0932.8Show/hide
Query:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP
        Q+  + +GN F PGWRDHPN  + N         P          +L   V+ L   Q K+Q +TQ+ +Q++   ISQLA TV +LE++  +LP   EI 
Subjt:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP

Query:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISHSSPLLDASSIPFPFPIL--YRLPQVVLGPEYSREDSRGVKLNVLSAF
         +E V A+  RSGTV+S      P+       D SL S        SS   P P L  Y  P      + +R D +  +  +L  F
Subjt:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISHSSPLLDASSIPFPFPIL--YRLPQVVLGPEYSREDSRGVKLNVLSAF

A0A6P4PCR5 uncharacterized protein LOC1084715681.8e-0932.62Show/hide
Query:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP
        Q+  + +GN F PGWRDHP+  + N         P          +L   V+ L   Q K+Q +TQ+ +Q++   ISQLA TV +L+++  +LP   E  
Subjt:  QQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIP

Query:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISH---SSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGVKLNVLSAF
         +E V A+T RSGTV+S      P+       D SL S    SSP      +P P    Y  P   LG + +R D +  +  +L  F
Subjt:  RKEEVCAVTSRSGTVLS----SSPQNSSFPCWDCSLISH---SSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGVKLNVLSAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGAACCAACAGACACCTGACCAGTTTGGGAACAATTTTTATCCTGGTTGGAGAGACCACCCAAACTATTACTTCCAAAACAATCAAAGCCTAAATATGCAGCATGG
ACCAAATCTAGGTATTTTAGAAATTTTGGTTAAAAATTTATCTGACAGCGTTCAAGTCTTGCAGGAAGGTCAGCTCAAATACCAGGAGGAGACCCAAGCTGGGATGCAGC
AACTGGGAACCACAATTTCCCAGTTGGCCGACACTGTCAGTAAGTTGGAGGCTAAGATAGACAAACTACCTGTTTGTCCTGAGATCCCAAGGAAAGAAGAAGTATGCGCA
GTCACGTCAAGGAGTGGAACGGTTCTGAGTTCCAGTCCACAAAATTCATCTTTCCCTTGTTGGGATTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAG
CATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGGAGTAAAATTGAATGTCTTAAGTGCTTTCG
ATCTTCAATTGCTTCCGCATGTCCTCATTTCACTCATTGCATGGCTGGTTCATTGCTTGGATGAGCGGTTCGGGATGGTTCGTGAAGCTCGGGCGTGTTGCAAGCGCCCT
GGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGCGGTCTC
CATCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCCTGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCGGAACAACGCAAACTCCAGA
AATGGATAGGGTTTCCTAGGGCCATTCCCAACATTAGCTCTTCCCTACGGTGGCATTGTTGGGGCCGTCCTCTGCGATCTGAAAATGATGGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGAACCAACAGACACCTGACCAGTTTGGGAACAATTTTTATCCTGGTTGGAGAGACCACCCAAACTATTACTTCCAAAACAATCAAAGCCTAAATATGCAGCATGG
ACCAAATCTAGGTATTTTAGAAATTTTGGTTAAAAATTTATCTGACAGCGTTCAAGTCTTGCAGGAAGGTCAGCTCAAATACCAGGAGGAGACCCAAGCTGGGATGCAGC
AACTGGGAACCACAATTTCCCAGTTGGCCGACACTGTCAGTAAGTTGGAGGCTAAGATAGACAAACTACCTGTTTGTCCTGAGATCCCAAGGAAAGAAGAAGTATGCGCA
GTCACGTCAAGGAGTGGAACGGTTCTGAGTTCCAGTCCACAAAATTCATCTTTCCCTTGTTGGGATTGTTCTCTCATCTCTCATTCTTCTCCATTGCTTGATGCTTCAAG
CATTCCCTTCCCATTCCCTATCTTATATAGACTCCCACAAGTCGTTCTTGGCCCGGAGTATAGTAGGGAAGACTCTAGAGGAGTAAAATTGAATGTCTTAAGTGCTTTCG
ATCTTCAATTGCTTCCGCATGTCCTCATTTCACTCATTGCATGGCTGGTTCATTGCTTGGATGAGCGGTTCGGGATGGTTCGTGAAGCTCGGGCGTGTTGCAAGCGCCCT
GGGAGCGTCCCCCTACGGATGGTGTTTGCATGGGTTAATATCAAGGTGAATGGGGAAAGTGTTCATAGTAAGTGGGAGAAGGAAACGTGTCAAACGTATCCTGCGGTCTC
CATCATTAGGTTGCACCGTGAGATTCCTATGCGCTGCCTGCGAGTCGCCCTGGGAGCGATCACCCTACGGAGGGCTTGCGCATGGGATTCGGAACAACGCAAACTCCAGA
AATGGATAGGGTTTCCTAGGGCCATTCCCAACATTAGCTCTTCCCTACGGTGGCATTGTTGGGGCCGTCCTCTGCGATCTGAAAATGATGGGTAA
Protein sequenceShow/hide protein sequence
MQNQQTPDQFGNNFYPGWRDHPNYYFQNNQSLNMQHGPNLGILEILVKNLSDSVQVLQEGQLKYQEETQAGMQQLGTTISQLADTVSKLEAKIDKLPVCPEIPRKEEVCA
VTSRSGTVLSSSPQNSSFPCWDCSLISHSSPLLDASSIPFPFPILYRLPQVVLGPEYSREDSRGVKLNVLSAFDLQLLPHVLISLIAWLVHCLDERFGMVREARACCKRP
GSVPLRMVFAWVNIKVNGESVHSKWEKETCQTYPAVSIIRLHREIPMRCLRVALGAITLRRACAWDSEQRKLQKWIGFPRAIPNISSSLRWHCWGRPLRSENDG