CuGenDBv2

Gene ID	Spg030730
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Ubiquitin thioesterase
Genome location	scaffold11:29146607..29147889
RNA-Seq Expression	Spg030730
Synteny	Spg030730
Gene Ontology terms	GO:0071108 - protein K48-linked deubiquitination (biological process) GO:0005634 - nucleus (cellular component) GO:0004843 - thiol-dependent ubiquitin-specific protease activity (molecular function) GO:0019784 - NEDD8-specific protease activity (molecular function) GO:0043130 - ubiquitin binding (molecular function) GO:0061815 - ubiquitinyl hydrolase activity, acting on linear ubiquitin (molecular function) GO:1990380 - Lys48-specific deubiquitinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597694.1 OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 1, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-18

87.5

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQTP+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

XP_022932663.1 ubiquitin thioesterase otubain-like isoform X1 [Cucurbita moschata]

1.2e-18

87.5

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQTP+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

XP_022932666.1 ubiquitin thioesterase otubain-like isoform X2 [Cucurbita moschata]

1.2e-18

87.5

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQTP+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

XP_023539139.1 ubiquitin thioesterase otubain-like isoform X1 [Cucurbita pepo subsp. pepo]

1.2e-18

87.5

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQTP+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

XP_023539141.1 ubiquitin thioesterase otubain-like isoform X2 [Cucurbita pepo subsp. pepo]

1.2e-18

87.5

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQTP+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CXW6 Ubiquitin thioesterase

4.7e-18

82.14

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGK+E+ ISIQTPE+D+W+NF DDDIMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

A0A6J1EX09 Ubiquitin thioesterase

5.6e-19

87.5

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQTP+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

A0A6J1F2S9 Ubiquitin thioesterase

5.6e-19

87.5

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQTP+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

A0A6J1I7Y3 Ubiquitin thioesterase

2.1e-18

85.71

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQ P+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

A0A6J1I9A3 Ubiquitin thioesterase

2.1e-18

85.71

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Query:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK
        + NQENLD DGKVESVISIQ P+YDSWD F DD+IMQQKSAIFVQEAEKVPFVGDK
Subjt:  LNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGGCACTTTCCGGTTCTTGAATAATCAGGAAAATCTTGATACAGATGGGAAAGTGGAGTCTGTGATATCTATTCAAACACCAGAGTACGATAGTTGGGACAATTTTGT
TGATGATGATATCATGCAGCAGAAATCTGCAATTTTTGTTCAGGAAGCTGAGAAAGTTCCATTTGTTGGTGACAAGGCAAGTTCACCTATCTAA

mRNA sequence

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Protein sequence

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MGTFRFLNNQENLDTDGKVESVISIQTPEYDSWDNFVDDDIMQQKSAIFVQEAEKVPFVGDKASSPI

Spg030730 (gene) of Sponge gourd (cylindrica) v1 genome