| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] | 3.1e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
|
| XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] | 3.5e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
|
| XP_008457278.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 [Cucumis melo] | 3.1e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
|
| XP_016902111.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 [Cucumis melo] | 3.5e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
|
| XP_016902111.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 [Cucumis melo] | 3.1e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
|
| XP_016902112.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X3 [Cucumis melo] | 3.5e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
|
| XP_016902112.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X3 [Cucumis melo] | 6.8e-153 | 93.65 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE
|
|
| XP_016902113.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X4 [Cucumis melo] | 3.5e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
|
| XP_016902113.1 PREDICTED: probable RNA polymerase II transcription factor B subunit 1-1 isoform X4 [Cucumis melo] | 3.1e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 1.5e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
|
| A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 1.7e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
|
| A0A1S3C6E8 probable RNA polymerase II transcription factor B subunit 1-1 isoform X1 | 1.5e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
|
| A0A1S4E1K9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 | 1.7e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
|
| A0A1S4E1K9 probable RNA polymerase II transcription factor B subunit 1-1 isoform X2 | 1.5e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
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| A0A1S4E1L0 probable RNA polymerase II transcription factor B subunit 1-1 isoform X3 | 1.7e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
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| A0A1S4E1L0 probable RNA polymerase II transcription factor B subunit 1-1 isoform X3 | 1.5e-153 | 86.97 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE-
Query: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
+ F Y S L+ + SR+ +A+
Subjt: -ISAFLVRYRCKQSLLFPALDLDSRITEAL
|
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| A0A1S4E1L2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X4 | 1.7e-16 | 92.31 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
+EIKETV ADFRHQVSLLVRPMHQALDAAFQHHDADLQKRS KSGER NGYT
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGYT
|
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| A0A1S4E1L2 probable RNA polymerase II transcription factor B subunit 1-1 isoform X4 | 3.3e-153 | 93.65 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDD+ILAA+TRKK IR VDPTLDLEADLGDDYTHLPDHGIFR
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
DGGKEI+ESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNE+QT LDRISRMTAIEDLQA ++HPFAPLCIKDPRDYFDAQ
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQ
Query: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE
QANAIKTLDDTRAGMQQTKC+LST EAYCSLRESISEIKSSG NHPIIKPEVA+MVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLH S++
Subjt: QANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHSLGSLE
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|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P32780 General transcription factor IIH subunit 1 | 9.3e-04 | 34.85 | Show/hide |
Query: TGILLEFIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAA---AEAAEDEELAL
T ++E IF PAV + +VP+ M+EK+FWT++F++ Y H + + + AE A+ +E L
Subjt: TGILLEFIFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAA---AEAAEDEELAL
|
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| Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1 | 8.0e-88 | 58.03 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK D+ILA ETR K IRRVDPTLD+EAD GDDYTHL DHGI R
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
DG ++ E QN+ ++R+L QDLNR AVVLEGR+IDV+ ED R VAEAL R + + + Q L+R+SR+ +EDLQA N P APL IKDPR
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
Query: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
DYF++QQ N + + G + K N+ EAY L+ESI EI+++GL+ P+IKPEV+ V++ LT+ I++ K GKNP+ES L+ LP TK+E+LH
Subjt: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
Query: LGSLE
S++
Subjt: LGSLE
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| Q3ECP0 General transcription and DNA repair factor IIH subunit TFB1-1 | 2.0e-14 | 74.51 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY
+ +KE+VQ+D RHQVSLLVRPM QALDAAF H++ DLQ+R+AKSGERPNGY
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY
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| Q55FP1 General transcription factor IIH subunit 1 | 5.8e-06 | 23.31 | Show/hide |
Query: PSCLLGEL-PSSKTGILLEF---------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKK
PS LL ++ PSS+T + + IF P+V +A+ +VP K+SE++FW KY +++Y + ++S A A +D+ + + D+ ++K
Subjt: PSCLLGEL-PSSKTGILLEF---------IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKK
Query: VIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTI----DVDLEDPRTVAEALVRSRHAVEGNEKQTTLDR
+I ++P +DL + G D +G+ D ++ ++ + L + NR A+VL + + +++E + + + ++ TT
Subjt: VIRRVDPTLDLEADLGDDYTHLPDHGIFRDGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTI----DVDLEDPRTVAEALVRSRHAVEGNEKQTTLDR
Query: ISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQQAN
+ T +NN IKDP Y + N
Subjt: ISRMTAIEDLQASNNHPFAPLCIKDPRDYFDAQQAN
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| Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3 | 2.6e-86 | 58.36 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK D+ILA E R+K +RRVDPTLD++AD GDDYTHL DHGI R
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
DG +I E QN+ +R+L QDLNR AVVLEGR I+V ED R VAEAL R++ + + Q L+R+SR T +EDLQA N P APL IKDPR
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
Query: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
DYF++QQ N L + R G + +K N+ EAY L+ESI I+ +GL+ P+IKPEV+ V++ LT+ IS+ K LGKNPQES L+ LP TK+E++H
Subjt: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
Query: LGSLE
S++
Subjt: LGSLE
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| Q9M322 General transcription and DNA repair factor IIH subunit TFB1-3 | 1.9e-09 | 68.89 | Show/hide |
Query: LWQEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK
L +K++VQ+D RHQVSLLVRPM QALDAAFQH+++DLQ+R+AK
Subjt: LWQEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G55750.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) | 5.7e-89 | 58.03 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFA KPAV QAF+N+VP+KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK D+ILA ETR K IRRVDPTLD+EAD GDDYTHL DHGI R
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
DG ++ E QN+ ++R+L QDLNR AVVLEGR+IDV+ ED R VAEAL R + + + Q L+R+SR+ +EDLQA N P APL IKDPR
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHAVEG------NEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
Query: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
DYF++QQ N + + G + K N+ EAY L+ESI EI+++GL+ P+IKPEV+ V++ LT+ I++ K GKNP+ES L+ LP TK+E+LH
Subjt: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
Query: LGSLE
S++
Subjt: LGSLE
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| AT1G55750.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) | 1.4e-15 | 74.51 | Show/hide |
Query: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY
+ +KE+VQ+D RHQVSLLVRPM QALDAAF H++ DLQ+R+AKSGERPNGY
Subjt: QEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAKSGERPNGY
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| AT3G25270.1 Ribonuclease H-like superfamily protein | 8.4e-08 | 28.26 | Show/hide |
Query: IWKDNFPKKIKFFLWE-LHGAISTKDVLQKRMPYLAISPGWCSICKKNDESQNHLFIHCSFAWQFWNCI------CQSFGWYLTFRRDTKDLLNIVVVEP
IWK KIK FLW+ L GA++T D L++R ++ P C C + DE+ HLF C +A Q W ++ G +T + LL+ +
Subjt: IWKDNFPKKIKFFLWE-LHGAISTKDVLQKRMPYLAISPGWCSICKKNDESQNHLFIHCSFAWQFWNCI------CQSFGWYLTFRRDTKDLLNIVVVEP
Query: PFKEAKALLWKHIIRAFFWVLWRERNNRIFKDIELAFE
+ +W W LW+ RN +F+ ++++
Subjt: PFKEAKALLWKHIIRAFFWVLWRERNNRIFKDIELAFE
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| AT3G61420.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) | 1.8e-87 | 58.36 | Show/hide |
Query: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
IFA KPAV QAF+N+VP KM+EKDFWTKYFRAEYL+STKN+ AAAEAAEDEELA+FLK D+ILA E R+K +RRVDPTLD++AD GDDYTHL DHGI R
Subjt: IFALKPAVHQAFLNHVPNKMSEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDDILAAETRKKVIRRVDPTLDLEADLGDDYTHLPDHGIFR
Query: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
DG +I E QN+ +R+L QDLNR AVVLEGR I+V ED R VAEAL R++ + + Q L+R+SR T +EDLQA N P APL IKDPR
Subjt: DGGKEISESQNEHYRRTLSQDLNRQGAVVLEGRTIDVDLEDPRTVAEALVRSRHA------VEGNEKQTTLDRISRMTAIEDLQASNNHPFAPLCIKDPR
Query: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
DYF++QQ N L + R G + +K N+ EAY L+ESI I+ +GL+ P+IKPEV+ V++ LT+ IS+ K LGKNPQES L+ LP TK+E++H
Subjt: DYFDAQQANAIKTLDDTRAGMQQTKCNLSTAEAYCSLRESISEIKSSGLNHPIIKPEVAVMVYNGLTQNISSTKYQLGKNPQESILESLPNPTKEELLHS
Query: LGSLE
S++
Subjt: LGSLE
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| AT3G61420.1 BSD domain (BTF2-like transcription factors, Synapse-associated proteins and DOS2-like proteins) | 1.4e-10 | 68.89 | Show/hide |
Query: LWQEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK
L +K++VQ+D RHQVSLLVRPM QALDAAFQH+++DLQ+R+AK
Subjt: LWQEIKETVQADFRHQVSLLVRPMHQALDAAFQHHDADLQKRSAK
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