; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030751 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030751
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCytochrome C biogenesis protein CcmFC protein
Genome locationscaffold11:28887989..28888768
RNA-Seq ExpressionSpg030751
SyntenySpg030751
Gene Ontology termsGO:0017004 - cytochrome complex assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA0413844.1 unnamed protein product [Arabidopsis thaliana]2.4e-2955.63Show/hide
Query:  QASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSW--VAGKKSGHGDSSQGATLVLAAYPEIKWDNRKNGMRGSYRIG-FGGDKLASSQAYPHPD
        +ASRA+SAVGTGFPK+ PR     +       +L   +    +  +KSG GDS +               ++    R +  IG FGGDKLASSQAYP PD
Subjt:  QASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSW--VAGKKSGHGDSSQGATLVLAAYPEIKWDNRKNGMRGSYRIG-FGGDKLASSQAYPHPD

Query:  RQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI
        RQLLG  ISPKLPPVF PSCMRQKLV RTV RPSPTPAVMV+LRSTN KKI
Subjt:  RQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI

CAA0413853.1 unnamed protein product [Arabidopsis thaliana]2.4e-2955.63Show/hide
Query:  QASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSW--VAGKKSGHGDSSQGATLVLAAYPEIKWDNRKNGMRGSYRIG-FGGDKLASSQAYPHPD
        +ASRA+SAVGTGFPK+ PR     +       +L   +    +  +KSG GDS +               ++    R +  IG FGGDKLASSQAYP PD
Subjt:  QASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSW--VAGKKSGHGDSSQGATLVLAAYPEIKWDNRKNGMRGSYRIG-FGGDKLASSQAYPHPD

Query:  RQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI
        RQLLG  ISPKLPPVF PSCMRQKLV RTV RPSPTPAVMV+LRSTN KKI
Subjt:  RQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI

KAF3592188.1 hypothetical protein DY000_02021683 [Brassica cretica]3.5e-2849.74Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSWVAGKKSGHGDSSQGATLVL
        MGVS AARK PVLTTLRDTKA++      +     N H   +        G G PK  P P      G       A    W            Q   L L
Subjt:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSWVAGKKSGHGDSSQGATLVL

Query:  AAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI
         A    +WD+     RG +   F GDKLASSQAYP PD+QLLG  ISPK PPVF PSCMRQKLV RTV RPSPTPAVMV+LRSTN KKI
Subjt:  AAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI

VDD65148.1 unnamed protein product [Brassica oleracea]2.8e-3051.04Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSWV---AGKKSGHGDSSQGAT
        MGVS AARKHPVLTTLRDTKA++     +L  E   S    Q        G G PK  P P    +       +L   +  +   A KKSG GDS +G  
Subjt:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSWV---AGKKSGHGDSSQGAT

Query:  LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI
                  W              F GDKLASSQAYP PDRQLLG  ISPK PPVF PSCMRQKLV RTV RPSPTPAVMV+LRSTN KKI
Subjt:  LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI

VDD65182.1 unnamed protein product [Brassica oleracea]1.4e-2950.26Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSW--VAGKKSGHGDSSQGATL
        MGVS AARKHPVLTTLRDTKA++     +L  E   S    Q        G G PK  P P    +       +L   +    +  +KSG GDS +G   
Subjt:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSW--VAGKKSGHGDSSQGATL

Query:  VLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI
                 W              F GDKLASSQAYP PDRQLLG  ISPK PPVF PSCMRQKLV RTV RPSPTPAVMV+LRSTN KKI
Subjt:  VLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI

TrEMBL top hitse value%identityAlignment
A0A3P6GFM5 CcmF_C domain-containing protein1.4e-3051.04Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSWV---AGKKSGHGDSSQGAT
        MGVS AARKHPVLTTLRDTKA++     +L  E   S    Q        G G PK  P P    +       +L   +  +   A KKSG GDS +G  
Subjt:  MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSWV---AGKKSGHGDSSQGAT

Query:  LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI
                  W              F GDKLASSQAYP PDRQLLG  ISPK PPVF PSCMRQKLV RTV RPSPTPAVMV+LRSTN KKI
Subjt:  LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI

A0A6N2K3Y5 Uncharacterized protein1.5e-3252.2Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQIPH--------PTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKKSG
        MGVS AARKHPVLTTLRDTKAQ+          P+    RER                G G PK  A  R +         N V A PTSW   AG    
Subjt:  MGVSLAARKHPVLTTLRDTKAQIPH--------PTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKKSG

Query:  HGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRST
          D     T    LVL AYP +KW NR+N  R  YRIGF G  L   +    PDRQLLG  IS KLPPVF PSCMRQKLVSRTV RPSPTPAVMV+LRST
Subjt:  HGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRST

Query:  NAKKI
        N KKI
Subjt:  NAKKI

A0A6N2KH66 Uncharacterized protein1.1e-3252.66Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQ----------IPHPTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKK
        MGVS AARKHPVLTTLRDTKAQ          IP  TK     +       Q  R     G G PK  A  R +         N V A PTSW   AG  
Subjt:  MGVSLAARKHPVLTTLRDTKAQ----------IPHPTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKK

Query:  SGHGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLR
            D     T    LVL AYP +KW NR+N  R  YRIGF G  L   +    PDRQLLG  IS KLPPVF PSCMRQKLVSRTV RPSPTPAVMV+LR
Subjt:  SGHGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLR

Query:  STNAKKI
        STN KKI
Subjt:  STNAKKI

A0A6N2KT43 Uncharacterized protein1.1e-3252.66Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQ----------IPHPTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKK
        MGVS AARKHPVLTTLRDTKAQ          IP  TK     +       Q  R     G G PK  A  R +         N V A PTSW   AG  
Subjt:  MGVSLAARKHPVLTTLRDTKAQ----------IPHPTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKK

Query:  SGHGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLR
            D     T    LVL AYP +KW NR+N  R  YRIGF G  L   +    PDRQLLG  IS KLPPVF PSCMRQKLVSRTV RPSPTPAVMV+LR
Subjt:  SGHGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLR

Query:  STNAKKI
        STN KKI
Subjt:  STNAKKI

A0A6N2KX28 Uncharacterized protein (Fragment)1.5e-3252.2Show/hide
Query:  MGVSLAARKHPVLTTLRDTKAQIPH--------PTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKKSG
        MGVS AARKHPVLTTLRDTKAQ+          P+    RER                G G PK  A  R +         N V A PTSW   AG    
Subjt:  MGVSLAARKHPVLTTLRDTKAQIPH--------PTKSLTRERENSHYCWQASRAVSAVGTGFPK--ASPRPESAYNEGDDPNAVLAKPTSWV--AGKKSG

Query:  HGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRST
          D     T    LVL AYP +KW NR+N  R  YRIGF G  L   +    PDRQLLG  IS KLPPVF PSCMRQKLVSRTV RPSPTPAVMV+LRST
Subjt:  HGDSSQGAT----LVLAAYPEIKWDNRKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRST

Query:  NAKKI
        N KKI
Subjt:  NAKKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGTAAGCCTCGCTGCTCGGAAACACCCAGTTCTGACCACACTGAGAGACACGAAAGCGCAGATTCCGCATCCAACCAAGTCTTTGACCAGGGAACGGGAGAATTC
CCACTACTGCTGGCAGGCCAGTCGGGCCGTGAGCGCGGTGGGAACGGGCTTCCCAAAAGCCAGCCCGAGGCCGGAGTCAGCATATAATGAAGGGGACGACCCTAATGCTG
TGTTGGCAAAGCCAACTTCTTGGGTTGCGGGCAAGAAGAGCGGACATGGGGACTCGAGTCAGGGCGCAACATTAGTATTAGCCGCCTATCCCGAAATCAAATGGGATAAT
AGAAAGAATGGGATGCGCGGGAGCTATAGGATTGGTTTTGGGGGGGATAAGCTTGCTTCTTCACAAGCTTATCCCCACCCCGACCGGCAGCTGCTGGGTTTCTCCATCTC
TCCTAAACTTCCCCCGGTCTTCGACCCGAGCTGTATGAGGCAGAAACTCGTCTCACGTACGGTTTGGAGGCCGAGCCCCACCCCAGCAGTAATGGTGCAGCTTAGGTCAA
CTAACGCAAAGAAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGTAAGCCTCGCTGCTCGGAAACACCCAGTTCTGACCACACTGAGAGACACGAAAGCGCAGATTCCGCATCCAACCAAGTCTTTGACCAGGGAACGGGAGAATTC
CCACTACTGCTGGCAGGCCAGTCGGGCCGTGAGCGCGGTGGGAACGGGCTTCCCAAAAGCCAGCCCGAGGCCGGAGTCAGCATATAATGAAGGGGACGACCCTAATGCTG
TGTTGGCAAAGCCAACTTCTTGGGTTGCGGGCAAGAAGAGCGGACATGGGGACTCGAGTCAGGGCGCAACATTAGTATTAGCCGCCTATCCCGAAATCAAATGGGATAAT
AGAAAGAATGGGATGCGCGGGAGCTATAGGATTGGTTTTGGGGGGGATAAGCTTGCTTCTTCACAAGCTTATCCCCACCCCGACCGGCAGCTGCTGGGTTTCTCCATCTC
TCCTAAACTTCCCCCGGTCTTCGACCCGAGCTGTATGAGGCAGAAACTCGTCTCACGTACGGTTTGGAGGCCGAGCCCCACCCCAGCAGTAATGGTGCAGCTTAGGTCAA
CTAACGCAAAGAAGATATAG
Protein sequenceShow/hide protein sequence
MGVSLAARKHPVLTTLRDTKAQIPHPTKSLTRERENSHYCWQASRAVSAVGTGFPKASPRPESAYNEGDDPNAVLAKPTSWVAGKKSGHGDSSQGATLVLAAYPEIKWDN
RKNGMRGSYRIGFGGDKLASSQAYPHPDRQLLGFSISPKLPPVFDPSCMRQKLVSRTVWRPSPTPAVMVQLRSTNAKKI