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Spg030765 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030765
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD_REPEATS_REGION domain-containing protein
Genome locationscaffold11:29611641..29616487
RNA-Seq ExpressionSpg030765
SyntenySpg030765
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFQ04439.1 uncharacterized WD repeat-containing protein c2a9.03 [Phtheirospermum japonicum]3.2e-0542.47Show/hide
Query:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLEGSVDAGIYILGLESLDYELHYRLGLSDFVPEVKVETL
        S G  E +C +V KG+NFYD QFNTRLVKSTIVH +   D  + ++ L +  +   Y  G  D V +++   L
Subjt:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLEGSVDAGIYILGLESLDYELHYRLGLSDFVPEVKVETL
KAE9457426.1 hypothetical protein C3L33_10672, partial [Rhododendron williamsianum]3.2e-0565.79Show/hide
Query:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLEGSVDAGI
        E  C QVEKG+NFYD QFNTRLVKSTIVH + ++D  +
Subjt:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLEGSVDAGI
MBA0868255.1 hypothetical protein [Gossypium schwendimanii]5.5e-0557.89Show/hide
Query:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE------GSVDAGIYILGLESL
        S  G E  CLQVEKGN FYD QFNTRLVKSTIVH +       SV      LGL  L
Subjt:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE------GSVDAGIYILGLESL
XP_022951510.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Cucurbita moschata]5.5e-0583.87Show/hide
Query:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
        E  CLQVEKGNNFYD QFNTRLVKSTIVH +
Subjt:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
XP_023001899.1 uncharacterized WD repeat-containing protein C2A9.03-like isoform X1 [Cucurbita maxima]5.5e-0583.87Show/hide
Query:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
        E  CLQVEKGNNFYD QFNTRLVKSTIVH +
Subjt:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
TrEMBL top hitse value%identityAlignment
A0A1U8NMZ6 uncharacterized WD repeat-containing protein C2A9.03-like3.5e-0575Show/hide
Query:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
        S  G E  CLQVEKGN FYD QFNTRLVKSTIVH +
Subjt:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
A0A6A4LA59 WD_REPEATS_REGION domain-containing protein (Fragment)1.6e-0565.79Show/hide
Query:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLEGSVDAGI
        E  C QVEKG+NFYD QFNTRLVKSTIVH + ++D  +
Subjt:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLEGSVDAGI
A0A6J1GIZ9 uncharacterized WD repeat-containing protein C2A9.03-like isoform X12.6e-0583.87Show/hide
Query:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
        E  CLQVEKGNNFYD QFNTRLVKSTIVH +
Subjt:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
A0A6J1KNX6 uncharacterized WD repeat-containing protein C2A9.03-like isoform X12.6e-0583.87Show/hide
Query:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
        E  CLQVEKGNNFYD QFNTRLVKSTIVH +
Subjt:  EWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE
A0A7J9MAX0 WD_REPEATS_REGION domain-containing protein2.6e-0557.89Show/hide
Query:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE------GSVDAGIYILGLESL
        S  G E  CLQVEKGN FYD QFNTRLVKSTIVH +       SV      LGL  L
Subjt:  SMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLE------GSVDAGIYILGLESL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36070.1 Transducin/WD40 repeat-like superfamily protein3.4e-0580Show/hide
Query:  VEKGNNFYDIQFNTRLVKSTIVHLE
        VEKG NFYD QFNTRLV STIVH +
Subjt:  VEKGNNFYDIQFNTRLVKSTIVHLE
AT1G36070.2 Transducin/WD40 repeat-like superfamily protein3.4e-0580Show/hide
Query:  VEKGNNFYDIQFNTRLVKSTIVHLE
        VEKG NFYD QFNTRLV STIVH +
Subjt:  VEKGNNFYDIQFNTRLVKSTIVHLE
AT1G78070.1 Transducin/WD40 repeat-like superfamily protein1.6e-0782.14Show/hide
Query:  CLQVEKGNNFYDIQFNTRLVKSTIVHLE
        CLQVEKG NFYD QFNTRLVKSTI H +
Subjt:  CLQVEKGNNFYDIQFNTRLVKSTIVHLE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTGGGTGGGTAGTTTCGGCACTGTTTGTGGTCGTGGAGGTGTTGTCCATGGGAGGTCGTGAGTGGAATTGCTTGCAAGTTGAAAAGGGGAACAATTTTTATGACAT
CCAGTTCAATACTAGGCTTGTTAAATCAACCATTGTTCATTTGGAAGGTAGTGTAGATGCAGGCATTTACATATTAGGCTTGGAGAGCTTGGATTATGAACTTCACTATA
GGCTTGGATTATCAGATTTCGTGCCTGAAGTGAAAGTTGAAACTTTGGCTGTAATTCATGGAGACCTCATTCATCAAAGAGGAGGAATGGATGAGATGGAGTTCGCAGAG
GCTGAGAGGTCAAGAATCTTAAGAAGTTCAAGAGTGATCATGTTGATCGTCCTTGGACACATGCTACAACGTTTAGGCAATAAGAGGTATCAATACTATTTGCTGAATGG
TACTAGATATGTGAGTCTGCACTGTGCTCTGAGATTGGCTCGCTTTAAGGCACAACGTTATAAAGATGCTACTCATCAGTTTCAGGATATTTGGGGTCTTGTTGTGAACC
TGAAGTGTTGTGAGGCTGTAGTTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGTGGGTGGGTAGTTTCGGCACTGTTTGTGGTCGTGGAGGTGTTGTCCATGGGAGGTCGTGAGTGGAATTGCTTGCAAGTTGAAAAGGGGAACAATTTTTATGACAT
CCAGTTCAATACTAGGCTTGTTAAATCAACCATTGTTCATTTGGAAGGTAGTGTAGATGCAGGCATTTACATATTAGGCTTGGAGAGCTTGGATTATGAACTTCACTATA
GGCTTGGATTATCAGATTTCGTGCCTGAAGTGAAAGTTGAAACTTTGGCTGTAATTCATGGAGACCTCATTCATCAAAGAGGAGGAATGGATGAGATGGAGTTCGCAGAG
GCTGAGAGGTCAAGAATCTTAAGAAGTTCAAGAGTGATCATGTTGATCGTCCTTGGACACATGCTACAACGTTTAGGCAATAAGAGGTATCAATACTATTTGCTGAATGG
TACTAGATATGTGAGTCTGCACTGTGCTCTGAGATTGGCTCGCTTTAAGGCACAACGTTATAAAGATGCTACTCATCAGTTTCAGGATATTTGGGGTCTTGTTGTGAACC
TGAAGTGTTGTGAGGCTGTAGTTAGTTGA
Protein sequenceShow/hide protein sequence
MRGWVVSALFVVVEVLSMGGREWNCLQVEKGNNFYDIQFNTRLVKSTIVHLEGSVDAGIYILGLESLDYELHYRLGLSDFVPEVKVETLAVIHGDLIHQRGGMDEMEFAE
AERSRILRSSRVIMLIVLGHMLQRLGNKRYQYYLLNGTRYVSLHCALRLARFKAQRYKDATHQFQDIWGLVVNLKCCEAVVS