; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030778 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030778
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold11:24354480..24357947
RNA-Seq ExpressionSpg030778
SyntenySpg030778
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
MQL77781.1 hypothetical protein [Colocasia esculenta]8.0e-1639.87Show/hide
Query:  QKGLGNPQGDLSEELLKSKKSE---REHKRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLK
        Q+ LG  Q     ELL   +      E    S++++  + DKK+ +D G       GR   D    L+ F  YTP ++  EQIL EIRN   L  P++++
Subjt:  QKGLGNPQGDLSEELLKSKKSE---REHKRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLK

Query:  SNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYLKEFTTKAEADQRRPRQR
        S+P  RD+++YC FHRDHGH T  C QLKDEIE LI+  YL  F  +   ++ RPR+R
Subjt:  SNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYLKEFTTKAEADQRRPRQR

XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]1.4e-1538.51Show/hide
Query:  KRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL
        KR S+  R  +  K++R+ +  +G     R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  L
Subjt:  KRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIRNEYLKEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM
        K+E+E LI   YLKE+  + +A Q     +    S    +RT    P+
Subjt:  KDEIEALIRNEYLKEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.9e-1941.48Show/hide
Query:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL
        K++R+ +  +G     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LIR  YL
Subjt:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL

Query:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM
        KE+  + +A Q     +    S    +RT    P+
Subjt:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]5.5e-1737.89Show/hide
Query:  LKSKKSEREHKRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDH
        L+ K+++++ +R       S+ +K+ R                 Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDH
Subjt:  LKSKKSEREHKRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDH

Query:  GHSTRNCIQLKDEIEALIRNEYLKEF------TTKAEADQRRPRQRQGWTSTGNSLRTKTD
        GH+T +C  LK+E+E LIR  YLKE+      T   E D + P  R+  T  G S   ++D
Subjt:  GHSTRNCIQLKDEIEALIRNEYLKEF------TTKAEADQRRPRQRQGWTSTGNSLRTKTD

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]2.1e-1638.57Show/hide
Query:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL
        K++R+ +  +G     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LIR  YL
Subjt:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL

Query:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPMAEAEA
        +E+  + +A Q    ++    S    +RT    P+    A
Subjt:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPMAEAEA

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128056.6e-1638.51Show/hide
Query:  KRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL
        KR S+  R  +  K++R+ +  +G     R R  Q D  +KFE+YT T++P EQ+LMEI+N  LL  P ++ ++   R K +YCLFH DHGH+T++C  L
Subjt:  KRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQL

Query:  KDEIEALIRNEYLKEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM
        K+E+E LI   YLKE+  + +A Q     +    S    +RT    P+
Subjt:  KDEIEALIRNEYLKEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM

A0A6J1DWY0 uncharacterized protein LOC1110252932.8e-1941.48Show/hide
Query:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL
        K++R+ +  +G     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++C  LK+E+E LIR  YL
Subjt:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL

Query:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM
        KE+  + +A Q     +    S    +RT    P+
Subjt:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPM

A0A6J1DYL6 uncharacterized protein LOC1110257851.0e-1638.57Show/hide
Query:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL
        K++R+ +  +G     R R  Q D  +KFE+YTPT++P EQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++   LK+E+E LIR  YL
Subjt:  KKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYL

Query:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPMAEAEA
        +E+  + +A Q    ++    S    +RT    P+    A
Subjt:  KEFTTKAEADQRRPRQRQGWTSTGNSLRTKTDSPMAEAEA

A0A6J1DZ52 uncharacterized protein LOC1110256122.7e-1737.89Show/hide
Query:  LKSKKSEREHKRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDH
        L+ K+++++ +R       S+ +K+ R                 Q D  +KFE+YTPT++P EQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDH
Subjt:  LKSKKSEREHKRPSSSDRDSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDH

Query:  GHSTRNCIQLKDEIEALIRNEYLKEF------TTKAEADQRRPRQRQGWTSTGNSLRTKTD
        GH+T +C  LK+E+E LIR  YLKE+      T   E D + P  R+  T  G S   ++D
Subjt:  GHSTRNCIQLKDEIEALIRNEYLKEF------TTKAEADQRRPRQRQGWTSTGNSLRTKTD

A0A7N2N013 Ribonuclease H1.6e-1443.18Show/hide
Query:  RPSSSDR--DSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQ
        RP   DR  DSR+D+ ++    G  R D  R +P  G    +F  +TP + P +Q+LM+I++   L  P KLKS+P  R + +YC FHRDHGH T +C  
Subjt:  RPSSSDR--DSRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQ

Query:  LKDEIEALIRNEYLKEFTTKAEADQRRPRQRQ
        LK +IEALIR   L++F  K   DQ  P Q Q
Subjt:  LKDEIEALIRNEYLKEFTTKAEADQRRPRQRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGCTTCCTATTTATAGCCAATTCCAACCACCACACATTAGGAAGGTAATTTTGGACCACTCCGATGAACAAGGAGCTGATGAGGACAACCGGGCAGAAATAGG
GCTAAGAGATGGACCCCAGAGGCGAAACCGGCAAATGGGACGAGTCAAGATCGAAGGGGTCGGGCATTTGGCCCGACCCCCCTGCCCGGCCTCGACTCGCTTGCGCGGGC
CGAGTCCCACCGACTCCGTTCGGTCCGTGCAGCCTCCAGCCACCCCGGTTCCGCCTGTTGGCGTCGTCTGTGGGGAGGAAAGCTTGCCAAATCTGCATATCGGTCACTCC
ATGAGTAAGGGGATGGAGAAGAGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGAACCGA
ATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCAGAGAGAAGCAAGCTGATCTCAAAATTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGA
TACTTCGCATCCTGGATAAACCTGGTCCTAGCACTAAAACCTATGATGAGAGGGGGCTCAGACCTACAGATCGTGCAATTCTGAGGAGCCCAGAGCCAAGCACACTAAAG
GATGGTGACCACACAGTTTCAACACCAAGCTACGGTCATACCAAGACAGACCTGAGGAATCTGATCGAGGATAAGCGCAGAAGTGCCAAAACTGCCGAGGCCGAGGCCAG
AGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCTAGATTGGCCGAGGCCGAGGCCGAAAAAGACAATCCCCTTAGGAAGACCGAGCTTC
TGGACACGCAAAAAGGACTCGGAAATCCTCAGGGAGACCTCTCAGAGGAGTTGCTCAAATCAAAGAAGTCAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGAC
AGTAGGAAGGACAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACTAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACAC
CCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGT
ATTGTCTCTTCCATCGAGATCATGGACATTCAACCAGGAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGAATACCTGAAGGAGTTCACCACTAAG
GCCGAGGCCGACCAGAGACGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGAGGACCAAAACAGACTCTCCTATGGCCGAGGCCGAGGCCGAGCCCTA
CCACACTTCATGCCAGGGTCAAGGACAACATTCTGGAGAACACACTAAGCCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGCTTCCTATTTATAGCCAATTCCAACCACCACACATTAGGAAGGTAATTTTGGACCACTCCGATGAACAAGGAGCTGATGAGGACAACCGGGCAGAAATAGG
GCTAAGAGATGGACCCCAGAGGCGAAACCGGCAAATGGGACGAGTCAAGATCGAAGGGGTCGGGCATTTGGCCCGACCCCCCTGCCCGGCCTCGACTCGCTTGCGCGGGC
CGAGTCCCACCGACTCCGTTCGGTCCGTGCAGCCTCCAGCCACCCCGGTTCCGCCTGTTGGCGTCGTCTGTGGGGAGGAAAGCTTGCCAAATCTGCATATCGGTCACTCC
ATGAGTAAGGGGATGGAGAAGAGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGAAGAAGGCCGAGATCGGCCTCGAACCGA
ATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCAGAGAGAAGCAAGCTGATCTCAAAATTGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCATAATTTGTCCAGGA
TACTTCGCATCCTGGATAAACCTGGTCCTAGCACTAAAACCTATGATGAGAGGGGGCTCAGACCTACAGATCGTGCAATTCTGAGGAGCCCAGAGCCAAGCACACTAAAG
GATGGTGACCACACAGTTTCAACACCAAGCTACGGTCATACCAAGACAGACCTGAGGAATCTGATCGAGGATAAGCGCAGAAGTGCCAAAACTGCCGAGGCCGAGGCCAG
AGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCTAGATTGGCCGAGGCCGAGGCCGAAAAAGACAATCCCCTTAGGAAGACCGAGCTTC
TGGACACGCAAAAAGGACTCGGAAATCCTCAGGGAGACCTCTCAGAGGAGTTGCTCAAATCAAAGAAGTCAGAACGTGAACACAAGAGGCCTTCTTCATCTGACCGCGAC
AGTAGGAAGGACAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACTAGATCATGGCCGAGGCCGACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAGGTACAC
CCCTACTTCAATCCCACAGGAGCAGATCTTGATGGAGATAAGGAATACAAACCTGCTCAACGCGCCCAGGAAGCTGAAGTCCAATCCTGACAACAGAGACAAGAGCCAGT
ATTGTCTCTTCCATCGAGATCATGGACATTCAACCAGGAACTGCATTCAGCTAAAGGACGAGATTGAAGCGCTGATTCGGAACGAATACCTGAAGGAGTTCACCACTAAG
GCCGAGGCCGACCAGAGACGACCCAGGCAAAGACAAGGGTGGACCTCAACTGGAAATTCGTTGAGGACCAAAACAGACTCTCCTATGGCCGAGGCCGAGGCCGAGCCCTA
CCACACTTCATGCCAGGGTCAAGGACAACATTCTGGAGAACACACTAAGCCTTAA
Protein sequenceShow/hide protein sequence
MGGLPIYSQFQPPHIRKVILDHSDEQGADEDNRAEIGLRDGPQRRNRQMGRVKIEGVGHLARPPCPASTRLRGPSPTDSVRSVQPPATPVPPVGVVCGEESLPNLHIGHS
MSKGMEKRNQDINTENSDGDRHQRRSREEGRDRPRTESPRPRSPLPSSREKQADLKIAALENKVSAMDHNLSRILRILDKPGPSTKTYDERGLRPTDRAILRSPEPSTLK
DGDHTVSTPSYGHTKTDLRNLIEDKRRSAKTAEAEARAAEAEARAAEAEARAAEARLAEAEAEKDNPLRKTELLDTQKGLGNPQGDLSEELLKSKKSEREHKRPSSSDRD
SRKDKKQRTDEGGRGRLDHGRGRPDQGDYLKKFERYTPTSIPQEQILMEIRNTNLLNAPRKLKSNPDNRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIRNEYLKEFTTK
AEADQRRPRQRQGWTSTGNSLRTKTDSPMAEAEAEPYHTSCQGQGQHSGEHTKP