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Spg030908 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030908
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNucleolar protein 58-like
Genome locationscaffold11:26374855..26379115
RNA-Seq ExpressionSpg030908
SyntenySpg030908
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.4e-0836.46Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G + C  S  L P A  W + +K R++PTTH  T+S++R++LL++   G  +N+ ++I  +I +C  +  G LFF +LIT++CR         EEK
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

PON50458.1 hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii]1.1e-0837.5Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G + C  S  L P A  W + +K R++PTTH   +S+ERV+LLY+   G  +N+ ++I  +I +C  +  G LFF +LI ++CR         EEK
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.9e-0938.64Show/hide
Query:  GDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G L P A  W + +K R++PTTH  T+S++R++LLY+   G  +N+ ++I  +I +C  +  G LFF +LIT++CR         EEK
Subjt:  GDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]1.4e-0842.17Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKIC
        G + C  S  L P A  W + +K R++PTTH  T+S+ERV+LLY+   G  +N+ QII  +I +   +  G LFF +LIT++C
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKIC

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.4e-0838.54Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G + C  S  L P A  W + +K R++PTTH  T+S+E V LLY+   G  +N+ ++I  +I +C  +  G LFF +LIT +CR         EEK
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)6.9e-0936.46Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G + C  S  L P A  W + +K R++PTTH  T+S++R++LL++   G  +N+ ++I  +I +C  +  G LFF +LIT++CR         EEK
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

A0A2P5BNT0 Uncharacterized protein (Fragment)5.3e-0937.5Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G + C  S  L P A  W + +K R++PTTH   +S+ERV+LLY+   G  +N+ ++I  +I +C  +  G LFF +LI ++CR         EEK
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

A0A2P5CEY2 Uncharacterized protein2.4e-0938.64Show/hide
Query:  GDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G L P A  W + +K R++PTTH  T+S++R++LLY+   G  +N+ ++I  +I +C  +  G LFF +LIT++CR         EEK
Subjt:  GDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

A0A2P5CPE8 Uncharacterized protein6.9e-0942.17Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKIC
        G + C  S  L P A  W + +K R++PTTH  T+S+ERV+LLY+   G  +N+ QII  +I +   +  G LFF +LIT++C
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKIC

A0A2P5DAQ2 Uncharacterized protein6.9e-0938.54Show/hide
Query:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK
        G + C  S  L P A  W + +K R++PTTH  T+S+E V LLY+   G  +N+ ++I  +I +C  +  G LFF +LIT +CR         EEK
Subjt:  GFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLVGIELEEKEEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTCATTGCATAGGATACCCCCACCTGCATGTCTCCTACATGGATGCTTTAGATCATTGCATCTGTATCGAATACAAGGTGATAAAACCCAACATAAACTTCGT
CGCCAATTGCCTGAAAGACTCAGTGGATACCACTGAGAAAGAGGAAGAAGAGTTTGTGCCCGTTTCTGAGGGCCATTCAAAAGATTTTGTAGAGAAGTTTGTGACTGCAA
ATATGGCACAAACAGAGCCTGAAACAGAGTTTGCACTAGATCCTGCGGTGCAGTCTGAACTGCAAGTCCCACCACCACCAAAAGAGGATGACAATGTGCTCGAGGACATG
TTCAAGCACCAAAAGAAAGCAGTGTTCGAGGACCTGATCGAACATGAGCAAGAAGAGGAGCAACAAGCTCCAATTGATGACAGTTCAACTGAAGGGAGATCTAAGAATAG
AAAAAGAAAAGATAGTTCCCTAAAGAAGCATAACACTAGGGAAATGACTTCTGTGCTTCCCCAAGCGAAGACATCACCATCACCGCCGCCTGTAAGGAGAGAACAAGTTG
TTCCTCAGCCAAAGAAGACTCCAACAAAGAGGTCGATAGTAGAAATTCAAGTGGAAACTCACCCAGACGCTCAGACCCATCTAGCTATCATGATGAAGCTGGTTCTGATG
TGTGAAAAAGAGTTTTCCACGAAGACAAGTCCTCTTCCAGCATTCATCGAGGATGTTTTGCGCAGATTAATCGGATTTTTCGACTGCCATCCCTCAGGAGATTTGAAGCC
AGAAGCAGTTTTCTGGCTATACGTGATCAAGATCAGGGTAATGCCAACAACACATGACACCACAATATCTCAAGAACGTGTCATGTTGTTGTATAACAAGCACAAGGGGC
TGGATCTGAACCTTGAACAAATCATCTGGATGGATATCCTCTCTTGTGGGCACAAGAATGTGGGGAGACTATTCTTCCAAACCTTGATCACTAAGATATGCAGGCTTGTA
GGAATAGAGCTGGAGGAGAAAGAGGAAAAAGAAGTGGCTCATATTTGCTCCCACCAGTCTCTTGTCTCTAGTAGTCTCAGAGTCATACTGGTTACTTCAATCGACTTGAG
TTTAATCAAGAAACTCATAGTCAATGTCAAGCAAAAGGTGACTTCACCTGAAAAGAAGGCTCAAGCAACTTCCCCTGCAGCTCAGAAATCAAAATCTCTTGAAGAAGCCA
CTGATACAGCAGGCAATGCGACCGCAAAATCATCACAAAATATACCAGATGCGACCTCAAGTCAACTGCAATATCCAGTCCTTAAACCACAACCTAAAGTGATTTGGTGG
TTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACTCATTGCATAGGATACCCCCACCTGCATGTCTCCTACATGGATGCTTTAGATCATTGCATCTGTATCGAATACAAGGTGATAAAACCCAACATAAACTTCGT
CGCCAATTGCCTGAAAGACTCAGTGGATACCACTGAGAAAGAGGAAGAAGAGTTTGTGCCCGTTTCTGAGGGCCATTCAAAAGATTTTGTAGAGAAGTTTGTGACTGCAA
ATATGGCACAAACAGAGCCTGAAACAGAGTTTGCACTAGATCCTGCGGTGCAGTCTGAACTGCAAGTCCCACCACCACCAAAAGAGGATGACAATGTGCTCGAGGACATG
TTCAAGCACCAAAAGAAAGCAGTGTTCGAGGACCTGATCGAACATGAGCAAGAAGAGGAGCAACAAGCTCCAATTGATGACAGTTCAACTGAAGGGAGATCTAAGAATAG
AAAAAGAAAAGATAGTTCCCTAAAGAAGCATAACACTAGGGAAATGACTTCTGTGCTTCCCCAAGCGAAGACATCACCATCACCGCCGCCTGTAAGGAGAGAACAAGTTG
TTCCTCAGCCAAAGAAGACTCCAACAAAGAGGTCGATAGTAGAAATTCAAGTGGAAACTCACCCAGACGCTCAGACCCATCTAGCTATCATGATGAAGCTGGTTCTGATG
TGTGAAAAAGAGTTTTCCACGAAGACAAGTCCTCTTCCAGCATTCATCGAGGATGTTTTGCGCAGATTAATCGGATTTTTCGACTGCCATCCCTCAGGAGATTTGAAGCC
AGAAGCAGTTTTCTGGCTATACGTGATCAAGATCAGGGTAATGCCAACAACACATGACACCACAATATCTCAAGAACGTGTCATGTTGTTGTATAACAAGCACAAGGGGC
TGGATCTGAACCTTGAACAAATCATCTGGATGGATATCCTCTCTTGTGGGCACAAGAATGTGGGGAGACTATTCTTCCAAACCTTGATCACTAAGATATGCAGGCTTGTA
GGAATAGAGCTGGAGGAGAAAGAGGAAAAAGAAGTGGCTCATATTTGCTCCCACCAGTCTCTTGTCTCTAGTAGTCTCAGAGTCATACTGGTTACTTCAATCGACTTGAG
TTTAATCAAGAAACTCATAGTCAATGTCAAGCAAAAGGTGACTTCACCTGAAAAGAAGGCTCAAGCAACTTCCCCTGCAGCTCAGAAATCAAAATCTCTTGAAGAAGCCA
CTGATACAGCAGGCAATGCGACCGCAAAATCATCACAAAATATACCAGATGCGACCTCAAGTCAACTGCAATATCCAGTCCTTAAACCACAACCTAAAGTGATTTGGTGG
TTTTAA
Protein sequenceShow/hide protein sequence
MQTHCIGYPHLHVSYMDALDHCICIEYKVIKPNINFVANCLKDSVDTTEKEEEEFVPVSEGHSKDFVEKFVTANMAQTEPETEFALDPAVQSELQVPPPPKEDDNVLEDM
FKHQKKAVFEDLIEHEQEEEQQAPIDDSSTEGRSKNRKRKDSSLKKHNTREMTSVLPQAKTSPSPPPVRREQVVPQPKKTPTKRSIVEIQVETHPDAQTHLAIMMKLVLM
CEKEFSTKTSPLPAFIEDVLRRLIGFFDCHPSGDLKPEAVFWLYVIKIRVMPTTHDTTISQERVMLLYNKHKGLDLNLEQIIWMDILSCGHKNVGRLFFQTLITKICRLV
GIELEEKEEKEVAHICSHQSLVSSSLRVILVTSIDLSLIKKLIVNVKQKVTSPEKKAQATSPAAQKSKSLEEATDTAGNATAKSSQNIPDATSSQLQYPVLKPQPKVIWW
F