; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030966 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030966
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold10:22560138..22565813
RNA-Seq ExpressionSpg030966
SyntenySpg030966
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN79190.1 hypothetical protein VITISV_000232 [Vitis vinifera]8.7e-2125.95Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWDANSQ-TWNLGLRRGLFDRETSSWLALVDKLSEVQL----------------------
        V  G RIRFW+D+W   + L V FP +  +   KN  I     +    +WN   RR L D E     +L+  L  + L                      
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWDANSQ-TWNLGLRRGLFDRETSSWLALVDKLSEVQL----------------------

Query:  -----------------------------------------GDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQ
                                                   +D LQ +     LSP  C LC+E  E +DH+FLHC      W  + +L  I +  P+
Subjt:  -----------------------------------------GDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQ

Query:  RVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNTASWWVSLHKNFFCNYSLLTIISDWQALMN
         V + +    N +   K+  V+   A  A +W++W+ERN R F+DK  + +    ++   AS WVS  K  F    L  I  DW A  N
Subjt:  RVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNTASWWVSLHKNFFCNYSLLTIISDWQALMN

CAN79190.1 hypothetical protein VITISV_000232 [Vitis vinifera]3.0e-0539.02Show/hide
Query:  VITLRKNNLCIKPIVGNSARKAGGILVMWKENCIEVVDSVLGAFSNTLECVFHGHIKGWITGVYGPCSTSNRKAFFQELYDL
        V T R     + P  G S    GGILVMW    +   + VLG+FS +++    G  + W++ VYGP ST+ RK F++EL D+
Subjt:  VITLRKNNLCIKPIVGNSARKAGGILVMWKENCIEVVDSVLGAFSNTLECVFHGHIKGWITGVYGPCSTSNRKAFFQELYDL

RVW70627.1 Exocyst complex component EXO70A1 [Vitis vinifera]4.6e-2226.64Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV---------------------QLG
        V  G+RIRFW+D+W   + L   F ++Y +S  +N ++     ++   +WN   RR L D E      L+  L  V                     ++ 
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV---------------------QLG

Query:  DDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRT
         +D+LQ +     L P  C LC  N E IDH+FLHC      W  +  L+G+ +  P+ +++ L+          + +++   A    +W++W+ERN R 
Subjt:  DDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRT

Query:  FQDKLNSIDIFCSLVQNTASWWVSLHKNF
        F+DK  + ++   L+   +S W S  + F
Subjt:  FQDKLNSIDIFCSLVQNTASWWVSLHKNF

RVW90400.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]1.8e-2125.71Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWD-ANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDDDRLQRKFSGWTLSPSG---
        V  G RIRFWDD+W   + L   +P + ++   KNA I      +   +WN   RR L D E     +L+  L  + +      +R    W++SPSG   
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWD-ANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDDDRLQRKFSGWTLSPSG---

Query:  ------------------------------------CRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAG
                                            C+LC+++ E +DH+FLHC   +  W  + +L  + +  P+ + +      N +   K+  V+  
Subjt:  ------------------------------------CRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAG

Query:  CAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNTASWWVSLHK
         A  A MW++W+ERN R F+DK  +       ++  AS W    K
Subjt:  CAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNTASWWVSLHK

RVW96808.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]6.7e-2127.51Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV------------------------
        V  G+RIRFW+D+W   + L   F D+Y +   KN ++     ++    WNL  RR L D E      L+  LS V                        
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV------------------------

Query:  --QLGDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKE
          ++  +D+LQ +    +L P  C LC  N E IDH+FLHC      W  + +L G+ +  P+  ++ L+          + + +   A    +W++W+E
Subjt:  --QLGDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKE

Query:  RNVRTFQDKLNSIDIFCSLVQNTASWWVS
        RN R F+DK  S +    L+   ++ W S
Subjt:  RNVRTFQDKLNSIDIFCSLVQNTASWWVS

TQD93576.1 hypothetical protein C1H46_020784 [Malus baccata]1.3e-2126.02Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQ--KKNASIYECWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDD------------------
        V  G+R+RFW+D W +  PL   FP ++ +S+   +N S +  +  NS +WN   RR L + E      L+ K+ EV+L                     
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQ--KKNASIYECWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDD------------------

Query:  ---------------------------------------------DRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIP
                                                     D++QR+     LSP  C LC    E ++HIFLHC +  + W  + + +  S+ IP
Subjt:  ---------------------------------------------DRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIP

Query:  QRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLN-SIDIFCSLVQNTASWWVSL
        +   E L     A  + +KA+V+ GC   A  W +W ERN R F+D L   +++    V+  A+ W S+
Subjt:  QRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLN-SIDIFCSLVQNTASWWVSL

TrEMBL top hitse value%identityAlignment
A0A438GEJ4 Exocyst subunit Exo70 family protein2.2e-2226.64Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV---------------------QLG
        V  G+RIRFW+D+W   + L   F ++Y +S  +N ++     ++   +WN   RR L D E      L+  L  V                     ++ 
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV---------------------QLG

Query:  DDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRT
         +D+LQ +     L P  C LC  N E IDH+FLHC      W  +  L+G+ +  P+ +++ L+          + +++   A    +W++W+ERN R 
Subjt:  DDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRT

Query:  FQDKLNSIDIFCSLVQNTASWWVSLHKNF
        F+DK  + ++   L+   +S W S  + F
Subjt:  FQDKLNSIDIFCSLVQNTASWWVSLHKNF

A0A438I181 Transposon TX1 uncharacterized 149 kDa protein8.5e-2225.71Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWD-ANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDDDRLQRKFSGWTLSPSG---
        V  G RIRFWDD+W   + L   +P + ++   KNA I      +   +WN   RR L D E     +L+  L  + +      +R    W++SPSG   
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWD-ANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDDDRLQRKFSGWTLSPSG---

Query:  ------------------------------------CRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAG
                                            C+LC+++ E +DH+FLHC   +  W  + +L  + +  P+ + +      N +   K+  V+  
Subjt:  ------------------------------------CRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAG

Query:  CAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNTASWWVSLHK
         A  A MW++W+ERN R F+DK  +       ++  AS W    K
Subjt:  CAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNTASWWVSLHK

A0A438IJB1 Transposon TX1 uncharacterized 149 kDa protein3.2e-2127.51Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV------------------------
        V  G+RIRFW+D+W   + L   F D+Y +   KN ++     ++    WNL  RR L D E      L+  LS V                        
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYE-CWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEV------------------------

Query:  --QLGDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKE
          ++  +D+LQ +    +L P  C LC  N E IDH+FLHC      W  + +L G+ +  P+  ++ L+          + + +   A    +W++W+E
Subjt:  --QLGDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKE

Query:  RNVRTFQDKLNSIDIFCSLVQNTASWWVS
        RN R F+DK  S +    L+   ++ W S
Subjt:  RNVRTFQDKLNSIDIFCSLVQNTASWWVS

A0A540M4H0 zf-RVT domain-containing protein6.5e-2226.02Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQ--KKNASIYECWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDD------------------
        V  G+R+RFW+D W +  PL   FP ++ +S+   +N S +  +  NS +WN   RR L + E      L+ K+ EV+L                     
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQ--KKNASIYECWDANSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDD------------------

Query:  ---------------------------------------------DRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIP
                                                     D++QR+     LSP  C LC    E ++HIFLHC +  + W  + + +  S+ IP
Subjt:  ---------------------------------------------DRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIP

Query:  QRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLN-SIDIFCSLVQNTASWWVSL
        +   E L     A  + +KA+V+ GC   A  W +W ERN R F+D L   +++    V+  A+ W S+
Subjt:  QRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLN-SIDIFCSLVQNTASWWVSL

M5XV38 zf-RVT domain-containing protein3.2e-2126.55Show/hide
Query:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWDAN---SQTWNLGLRRGLFDRETSSWLALVDKLSEVQL--------------------
        V  G++IRFW+D+W     L   FP + ++S++KN SI  C+  N      W+   RR L + E +  + L+D L  V+L                    
Subjt:  VNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWDAN---SQTWNLGLRRGLFDRETSSWLALVDKLSEVQL--------------------

Query:  ------------------------------------------GDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIP
                                                     D +QR+     LSPS C LC EN E+IDH+F+HC ++ + W  +   LG+ + IP
Subjt:  ------------------------------------------GDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIP

Query:  QRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLN-SIDIFCSLVQNTASWWVSLHKNFFCNYSLLTIISDWQALM
        +   E L   L      K+A ++  C   A  W +W ERN R FQ  +   ++     ++  AS W S+    F +Y   TI+ D  A++
Subjt:  QRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLN-SIDIFCSLVQNTASWWVSLHKNFFCNYSLLTIISDWQALM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein1.2e-0424.77Show/hide
Query:  CRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNT
        C+ C    E I HI  +C + +  W     ++G  +  P   ++ L   +     +    +     F   MW LWK RNV  FQ K  S D         
Subjt:  CRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKKARVIAGCAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNT

Query:  ASWWVSLHK
        A+ W++ ++
Subjt:  ASWWVSLHK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAAATAGTGGCAAGGACCGGGATTGGCAAAATGACACACACCCGATAGCCCTGGCTATGGTCTCCTCGGTGACAAACAGAAAGAAGAACAAGAGAAATGATAA
GCCTGATGGCTTTGGGATAAGTAGAGAAGTAGTGATTACCCTGAGGAAAAATAATTTATGCATCAAGCCAATTGTGGGTAACTCAGCGAGAAAAGCGGGCGGCATCCTTG
TCATGTGGAAAGAGAATTGTATAGAAGTTGTTGATTCAGTGTTGGGAGCCTTCTCCAATACCCTTGAATGTGTGTTCCATGGTCACATCAAAGGCTGGATTACGGGCGTC
TATGGCCCATGCTCAACCTCCAATAGAAAGGCCTTTTTCCAGGAGCTTTATGATCTAACAGGGCTTTGTCAAGGTTTACTTGGTCTAGAGCAGAATATATTGCTGAGCGA
CTTGAGGGAGCAAAATCTGTGCTGCAGCAAAGCAGGGAGCAAAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAACCGAAGTTTGTTAATTGTGGTCAAAGAATCA
GATTTTGGGATGATATTTGGTGTGATATTCGCCCTCTCAGTGTTGCTTTCCCAGACATCTATACTATTTCTCAAAAGAAAAATGCCTCCATTTATGAGTGTTGGGATGCA
AACTCTCAAACCTGGAATTTGGGTTTGCGAAGAGGCCTTTTTGACCGAGAAACCAGTAGTTGGTTGGCTCTAGTTGATAAGCTGAGTGAGGTGCAGTTGGGAGATGACGA
CAGGCTCCAAAGAAAGTTCAGTGGCTGGACTCTTTCCCCATCTGGATGCAGGCTGTGTATAGAGAATAGAGAAGACATTGATCATATTTTTCTTCATTGTAAGTTTGCTA
GAAAAGCGTGGGGCTTCATTGCTAGGCTGCTGGGTATTTCGTTTTGCATACCTCAAAGGGTGGACGAGTGGCTCCTAGAGGGGCTAAATGCTTGGAATATGAAGAAGAAG
GCTAGAGTTATTGCTGGTTGTGCTTTCAGGGCAACTATGTGGCTTTTGTGGAAGGAAAGGAACGTGAGAACCTTTCAAGATAAGTTGAATTCTATTGATATTTTTTGTAG
CCTTGTACAAAATACGGCATCGTGGTGGGTGTCTTTACACAAAAATTTCTTTTGTAATTACAGTCTACTTACGATTATTAGCGACTGGCAGGCTCTCATGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAAATAGTGGCAAGGACCGGGATTGGCAAAATGACACACACCCGATAGCCCTGGCTATGGTCTCCTCGGTGACAAACAGAAAGAAGAACAAGAGAAATGATAA
GCCTGATGGCTTTGGGATAAGTAGAGAAGTAGTGATTACCCTGAGGAAAAATAATTTATGCATCAAGCCAATTGTGGGTAACTCAGCGAGAAAAGCGGGCGGCATCCTTG
TCATGTGGAAAGAGAATTGTATAGAAGTTGTTGATTCAGTGTTGGGAGCCTTCTCCAATACCCTTGAATGTGTGTTCCATGGTCACATCAAAGGCTGGATTACGGGCGTC
TATGGCCCATGCTCAACCTCCAATAGAAAGGCCTTTTTCCAGGAGCTTTATGATCTAACAGGGCTTTGTCAAGGTTTACTTGGTCTAGAGCAGAATATATTGCTGAGCGA
CTTGAGGGAGCAAAATCTGTGCTGCAGCAAAGCAGGGAGCAAAACTGCCACGTCACAGCTCGTTAGCCATTTTAATGAACCGAAGTTTGTTAATTGTGGTCAAAGAATCA
GATTTTGGGATGATATTTGGTGTGATATTCGCCCTCTCAGTGTTGCTTTCCCAGACATCTATACTATTTCTCAAAAGAAAAATGCCTCCATTTATGAGTGTTGGGATGCA
AACTCTCAAACCTGGAATTTGGGTTTGCGAAGAGGCCTTTTTGACCGAGAAACCAGTAGTTGGTTGGCTCTAGTTGATAAGCTGAGTGAGGTGCAGTTGGGAGATGACGA
CAGGCTCCAAAGAAAGTTCAGTGGCTGGACTCTTTCCCCATCTGGATGCAGGCTGTGTATAGAGAATAGAGAAGACATTGATCATATTTTTCTTCATTGTAAGTTTGCTA
GAAAAGCGTGGGGCTTCATTGCTAGGCTGCTGGGTATTTCGTTTTGCATACCTCAAAGGGTGGACGAGTGGCTCCTAGAGGGGCTAAATGCTTGGAATATGAAGAAGAAG
GCTAGAGTTATTGCTGGTTGTGCTTTCAGGGCAACTATGTGGCTTTTGTGGAAGGAAAGGAACGTGAGAACCTTTCAAGATAAGTTGAATTCTATTGATATTTTTTGTAG
CCTTGTACAAAATACGGCATCGTGGTGGGTGTCTTTACACAAAAATTTCTTTTGTAATTACAGTCTACTTACGATTATTAGCGACTGGCAGGCTCTCATGAATTAG
Protein sequenceShow/hide protein sequence
MEENSGKDRDWQNDTHPIALAMVSSVTNRKKNKRNDKPDGFGISREVVITLRKNNLCIKPIVGNSARKAGGILVMWKENCIEVVDSVLGAFSNTLECVFHGHIKGWITGV
YGPCSTSNRKAFFQELYDLTGLCQGLLGLEQNILLSDLREQNLCCSKAGSKTATSQLVSHFNEPKFVNCGQRIRFWDDIWCDIRPLSVAFPDIYTISQKKNASIYECWDA
NSQTWNLGLRRGLFDRETSSWLALVDKLSEVQLGDDDRLQRKFSGWTLSPSGCRLCIENREDIDHIFLHCKFARKAWGFIARLLGISFCIPQRVDEWLLEGLNAWNMKKK
ARVIAGCAFRATMWLLWKERNVRTFQDKLNSIDIFCSLVQNTASWWVSLHKNFFCNYSLLTIISDWQALMN