; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg030998 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg030998
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein
Genome locationscaffold10:21891890..21895354
RNA-Seq ExpressionSpg030998
SyntenySpg030998
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041324.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.4e-0988.57Show/hide
Query:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        KDDGSAGR PLHRRTSKRWLYWACPTQR  VMLV+
Subjt:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
KAA0065516.1 uncharacterized protein E6C27_scaffold638G00090 [Cucumis melo var. makuwa]4.3e-2074.67Show/hide
Query:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
        GGPHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S   G
Subjt:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
TYJ98800.1 uncharacterized protein E5676_scaffold1625G00140 [Cucumis melo var. makuwa]4.3e-2074.67Show/hide
Query:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
        GGPHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S   G
Subjt:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
TYK02787.1 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein [Cucumis melo var. makuwa]2.9e-0885.71Show/hide
Query:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        KDDGSAGR PLHRRTSKRWLYWAC TQR  VMLV+
Subjt:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
TrEMBL top hitse value%identityAlignment
A0A5A7TCY8 DNA/RNA polymerases superfamily protein1.7e-0988.57Show/hide
Query:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        KDDGSAGR PLHRRTSKRWLYWACPTQR  VMLV+
Subjt:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
A0A5A7VGQ5 Uncharacterized protein2.1e-2074.67Show/hide
Query:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
        GGPHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S   G
Subjt:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
A0A5D3BG85 Uncharacterized protein2.1e-2074.67Show/hide
Query:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
        GGPHYDKDDG+A RAPLHRRTSKRWLYWACPT RRSVML          VEIEL VPDTLPTSAESS S+S   G
Subjt:  GGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVML----------VEIELLVPDTLPTSAESSRSSSSPLG
A0A5D3BTJ5 RVT_1 domain-containing protein/zf-CCHC domain-containing protein/RVP_2 domain-containing protein1.4e-0885.71Show/hide
Query:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
        KDDGSAGR PLHRRTSKRWLYWAC TQR  VMLV+
Subjt:  KDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGCGAGTGCTGGGTGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCC
TACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCTAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTCCATTAGGTCCCACTG
CACGCGTTAAGGATTCGCAACAGGACGGTTCAAGGCGGTTGGGCGGTCCGGTTCACGCGGACTGGCTGGGCTGGGACCAATTTTGTCCGGTTCAACTGGAATTTGGCTCG
GTTCGTGGTTTTCGTAGCTGGTTCGAAGTGGTTCGGGTCGGTTCGGACGATCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGCGAGTGCTGGGTGGGCCCCACTACGACAAAGACGATGGGAGTGCTGGGCGGGCCCCACTACATCGTAGGACTAGTAAACGTTGGTTGTACTGGGCGTGCCC
TACACAACGTAGATCGGTCATGTTAGTAGAGATCGAGCTCCTAGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTCCATTAGGTCCCACTG
CACGCGTTAAGGATTCGCAACAGGACGGTTCAAGGCGGTTGGGCGGTCCGGTTCACGCGGACTGGCTGGGCTGGGACCAATTTTGTCCGGTTCAACTGGAATTTGGCTCG
GTTCGTGGTTTTCGTAGCTGGTTCGAAGTGGTTCGGGTCGGTTCGGACGATCTAGACCAGTATTTGGAGCTGCAGAAGGACTTTTAG
Protein sequenceShow/hide protein sequence
MQSRVLGGPHYDKDDGSAGRAPLHRRTSKRWLYWACPTQRRSVMLVEIELLVPDTLPTSAESSRSSSSPLGPTARVKDSQQDGSRRLGGPVHADWLGWDQFCPVQLEFGS
VRGFRSWFEVVRVGSDDLDQYLELQKDF